RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 RPGRIP1LQ68CZ1 1315 aa12.55□□□□□ -0.4
SCARNA20.3-201ENST00000516913 LAMC1P11047 1609 aa12.55□□□□□ -0.4
SCARNA20.3-201ENST00000516913 NUTM2FA1L443 756 aa12.54□□□□□ -0.4
SCARNA20.3-201ENST00000516913 FNBP4Q8N3X1 1017 aaPredicted RBP12.53□□□□□ -0.4
SCARNA20.3-201ENST00000516913 MPHOSPH9Q99550 1183 aa12.53□□□□□ -0.4
SCARNA20.3-201ENST00000516913 STK26Q9P289 416 aa12.53□□□□□ -0.4
SCARNA20.3-201ENST00000516913 PXDNQ92626 1479 aa12.53□□□□□ -0.4
SCARNA20.3-201ENST00000516913 CDK12Q9NYV4 1490 aaPredicted RBP12.53□□□□□ -0.4
SCARNA20.3-201ENST00000516913 MYOM2P54296 1465 aa12.52□□□□□ -0.41
SCARNA20.3-201ENST00000516913 BCL9LQ86UU0 1499 aa12.52□□□□□ -0.41
SCARNA20.3-201ENST00000516913 FOXO3O43524 673 aa12.51□□□□□ -0.41
SCARNA20.3-201ENST00000516913 RBM6P78332 1123 aaKnown RBP12.51□□□□□ -0.41
SCARNA20.3-201ENST00000516913 NGLY1Q96IV0 654 aa12.51□□□□□ -0.41
SCARNA20.3-201ENST00000516913 PPLO60437 1756 aa12.51□□□□□ -0.41
SCARNA20.3-201ENST00000516913 ESCO1Q5FWF5 840 aa12.5□□□□□ -0.41
SCARNA20.3-201ENST00000516913 TECPR2O15040 1411 aa12.5□□□□□ -0.41
SCARNA20.3-201ENST00000516913 KIF1BO60333 1816 aa12.5□□□□□ -0.41
SCARNA20.3-201ENST00000516913 LRPPRCP42704 1394 aaKnown RBP12.49□□□□□ -0.41
SCARNA20.3-201ENST00000516913 ABCC11Q96J66 1382 aa12.49□□□□□ -0.41
SCARNA20.3-201ENST00000516913 PIK3C2GO75747 1445 aa12.48□□□□□ -0.41
SCARNA20.3-201ENST00000516913 ATRNO75882 1429 aa12.48□□□□□ -0.41
SCARNA20.3-201ENST00000516913 USP21Q9UK80 565 aa12.48□□□□□ -0.41
SCARNA20.3-201ENST00000516913 CFAP70Q5T0N1 1121 aa12.47□□□□□ -0.41
SCARNA20.3-201ENST00000516913 C14orf93Q9H972 538 aaKnown RBP12.46□□□□□ -0.41
SCARNA20.3-201ENST00000516913 CDC42BPGQ6DT37 1551 aa12.45□□□□□ -0.42
SCARNA20.3-201ENST00000516913 CABLES1Q8TDN4 633 aa12.45□□□□□ -0.42
SCARNA20.3-201ENST00000516913 NRXN1Q9ULB1 1477 aa12.45□□□□□ -0.42
SCARNA20.3-201ENST00000516913 CCDC144AA2RUR9 1427 aa12.45□□□□□ -0.42
SCARNA20.3-201ENST00000516913 YTHDC2Q9H6S0 1430 aaKnown RBP12.45□□□□□ -0.42
SCARNA20.3-201ENST00000516913 COL22A1Q8NFW1 1626 aaPredicted RBP12.44□□□□□ -0.42
SCARNA20.3-201ENST00000516913 SPATA31A3Q5VYP0 1347 aa12.43□□□□□ -0.42
SCARNA20.3-201ENST00000516913 IFT172Q9UG01 1749 aa12.43□□□□□ -0.42
SCARNA20.3-201ENST00000516913 ANKRD30BQ9BXX2 1392 aa12.43□□□□□ -0.42
SCARNA20.3-201ENST00000516913 NPHP3Q7Z494 1330 aa12.42□□□□□ -0.42
SCARNA20.3-201ENST00000516913 SAFB2Q14151 953 aaKnown RBP eCLIP12.42□□□□□ -0.42
SCARNA20.3-201ENST00000516913 TRPC5Q9UL62 973 aaPredicted RBP12.42□□□□□ -0.42
SCARNA20.3-201ENST00000516913 KRT28Q7Z3Y7 464 aa12.41□□□□□ -0.42
SCARNA20.3-201ENST00000516913 SIRT1Q96EB6 747 aa12.41□□□□□ -0.42
SCARNA20.3-201ENST00000516913 SLIT2O94813 1529 aa12.41□□□□□ -0.42
SCARNA20.3-201ENST00000516913 PRR36Q9H6K5 1346 aa12.4□□□□□ -0.42
SCARNA20.3-201ENST00000516913 GJD4Q96KN9 370 aaPredicted RBP12.4□□□□□ -0.42
SCARNA20.3-201ENST00000516913 PRAM1Q96QH2 718 aa12.4□□□□□ -0.42
SCARNA20.3-201ENST00000516913 GLI3P10071 1580 aa12.39□□□□□ -0.43
SCARNA20.3-201ENST00000516913 PLEKHG5O94827 1062 aa12.39□□□□□ -0.43
SCARNA20.3-201ENST00000516913 FMN2Q9NZ56 1722 aa12.38□□□□□ -0.43
SCARNA20.3-201ENST00000516913 PHF8Q9UPP1 1060 aa12.38□□□□□ -0.43
SCARNA20.3-201ENST00000516913 RAB3GAP2Q9H2M9 1393 aa12.38□□□□□ -0.43
SCARNA20.3-201ENST00000516913 RALGAPBQ86X10 1494 aa12.38□□□□□ -0.43
SCARNA20.3-201ENST00000516913 ADGRB1O14514 1584 aa12.38□□□□□ -0.43
SCARNA20.3-201ENST00000516913 FAM83GA6ND36 823 aa12.37□□□□□ -0.43
SCARNA20.3-201ENST00000516913 UNC5CLQ8IV45 518 aa12.37□□□□□ -0.43
SCARNA20.3-201ENST00000516913 PMFBP1Q8TBY8 1022 aa12.37□□□□□ -0.43
SCARNA20.3-201ENST00000516913 HIRIP3Q9BW71 556 aaPredicted RBP12.37□□□□□ -0.43
SCARNA20.3-201ENST00000516913 USP32Q8NFA0 1604 aa12.37□□□□□ -0.43
SCARNA20.3-201ENST00000516913 DHX57Q6P158 1386 aaKnown RBP12.36□□□□□ -0.43
SCARNA20.3-201ENST00000516913 ATAD2Q6PL18 1390 aa12.35□□□□□ -0.43
SCARNA20.3-201ENST00000516913 KNDC1Q76NI1 1749 aa12.35□□□□□ -0.43
SCARNA20.3-201ENST00000516913 DEFB132Q7Z7B7 95 aa12.35□□□□□ -0.43
SCARNA20.3-201ENST00000516913 RGPD8O14715 1765 aaPredicted RBP12.35□□□□□ -0.43
SCARNA20.3-201ENST00000516913 ONECUT3O60422 494 aaPredicted RBP12.34□□□□□ -0.43
SCARNA20.3-201ENST00000516913 TRAK1Q9UPV9 953 aa12.34□□□□□ -0.43
SCARNA20.3-201ENST00000516913 TNS3Q68CZ2 1445 aa12.34□□□□□ -0.43
SCARNA20.3-201ENST00000516913 SEPT12Q8IYM1 358 aa12.33□□□□□ -0.44
SCARNA20.3-201ENST00000516913 KDM2AQ9Y2K7 1162 aa12.32□□□□□ -0.44
SCARNA20.3-201ENST00000516913 MINK1Q8N4C8 1332 aaPredicted RBP12.32□□□□□ -0.44
SCARNA20.3-201ENST00000516913 SBNO1A3KN83 1393 aa12.31□□□□□ -0.44
SCARNA20.3-201ENST00000516913 VPS72Q15906 364 aa12.31□□□□□ -0.44
SCARNA20.3-201ENST00000516913 MARF1Q9Y4F3 1742 aaKnown RBP12.31□□□□□ -0.44
SCARNA20.3-201ENST00000516913 FAM182BQ5T319 152 aa12.3□□□□□ -0.44
SCARNA20.3-201ENST00000516913 DLC1Q96QB1 1528 aa12.3□□□□□ -0.44
SCARNA20.3-201ENST00000516913 DCAF11Q8TEB1 546 aa12.29□□□□□ -0.44
SCARNA20.3-201ENST00000516913 BRWD3Q6RI45 1802 aa12.28□□□□□ -0.44
SCARNA20.3-201ENST00000516913 WASLO00401 505 aaPredicted RBP12.28□□□□□ -0.44
SCARNA20.3-201ENST00000516913 PSME1Q06323 249 aa12.28□□□□□ -0.44
SCARNA20.3-201ENST00000516913 LMOD2Q6P5Q4 547 aa12.28□□□□□ -0.44
SCARNA20.3-201ENST00000516913 POGKQ9P215 609 aa12.28□□□□□ -0.44
SCARNA20.3-201ENST00000516913 ACIN1Q9UKV3 1341 aaKnown RBP12.28□□□□□ -0.44
SCARNA20.3-201ENST00000516913 TRPM3Q9HCF6 1732 aaPredicted RBP12.28□□□□□ -0.44
SCARNA20.3-201ENST00000516913 KIF1AQ12756 1690 aa12.27□□□□□ -0.45
SCARNA20.3-201ENST00000516913 NBPF1Q3BBV0 1214 aa12.27□□□□□ -0.45
SCARNA20.3-201ENST00000516913 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.27□□□□□ -0.45
SCARNA20.3-201ENST00000516913 ANKARQ7Z5J8 1434 aa12.27□□□□□ -0.45
SCARNA20.3-201ENST00000516913 ABCA3Q99758 1704 aa12.26□□□□□ -0.45
SCARNA20.3-201ENST00000516913 BTG4Q9NY30 223 aa12.26□□□□□ -0.45
SCARNA20.3-201ENST00000516913 ADGRB2O60241 1585 aa12.26□□□□□ -0.45
SCARNA20.3-201ENST00000516913 FAM98CQ17RN3 349 aaKnown RBP12.25□□□□□ -0.45
SCARNA20.3-201ENST00000516913 BLMP54132 1417 aaPredicted RBP12.25□□□□□ -0.45
SCARNA20.3-201ENST00000516913 NUTM2GQ5VZR2 741 aa12.24□□□□□ -0.45
SCARNA20.3-201ENST00000516913 CCDC125Q86Z20 511 aa12.24□□□□□ -0.45
SCARNA20.3-201ENST00000516913 NUDT16Q96DE0 195 aaKnown RBP12.24□□□□□ -0.45
SCARNA20.3-201ENST00000516913 ALS2Q96Q42 1657 aa12.24□□□□□ -0.45
SCARNA20.3-201ENST00000516913 ZRANB1Q9UGI0 708 aa12.24□□□□□ -0.45
SCARNA20.3-201ENST00000516913 PLCH1Q4KWH8 1693 aa12.23□□□□□ -0.45
SCARNA20.3-201ENST00000516913 ATP7BP35670 1465 aa12.23□□□□□ -0.45
SCARNA20.3-201ENST00000516913 ARHGEF10O15013 1369 aa12.23□□□□□ -0.45
SCARNA20.3-201ENST00000516913 CHRNA2Q15822 529 aa12.23□□□□□ -0.45
SCARNA20.3-201ENST00000516913 KRT27Q7Z3Y8 459 aa12.23□□□□□ -0.45
SCARNA20.3-201ENST00000516913 NRAPQ86VF7 1730 aa12.23□□□□□ -0.45
SCARNA20.3-201ENST00000516913 TULP4Q9NRJ4 1543 aa12.22□□□□□ -0.45
SCARNA20.3-201ENST00000516913 SPATA31A5Q5VU36 1347 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms