RNA–Protein interactions for RNA: ENST00000516588.1

RNU5A-4P-201, Transcript of RNA, U5A small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU5A-4P, Length 111 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU5A-4P-201ENST00000516588 GCGRP47871 477 aa11.15□□□□□ -0.62
RNU5A-4P-201ENST00000516588 RNF19BQ6ZMZ0 732 aa11.14□□□□□ -0.63
RNU5A-4P-201ENST00000516588 PHOX2BQ99453 314 aa11.14□□□□□ -0.63
RNU5A-4P-201ENST00000516588 SALL2Q9Y467 1007 aaPredicted RBP11.13□□□□□ -0.63
RNU5A-4P-201ENST00000516588 J3QL48 77 aa11.12□□□□□ -0.63
RNU5A-4P-201ENST00000516588 ZBTB24O43167 697 aaPredicted RBP11.12□□□□□ -0.63
RNU5A-4P-201ENST00000516588 ATP13A2Q9NQ11 1180 aa11.12□□□□□ -0.63
RNU5A-4P-201ENST00000516588 STK17AQ9UEE5 414 aa11.12□□□□□ -0.63
RNU5A-4P-201ENST00000516588 WNT7AO00755 349 aa11.11□□□□□ -0.63
RNU5A-4P-201ENST00000516588 GNPATO15228 680 aa11.11□□□□□ -0.63
RNU5A-4P-201ENST00000516588 SNIP1Q8TAD8 396 aaKnown RBP11.11□□□□□ -0.63
RNU5A-4P-201ENST00000516588 GPR37O15354 613 aa11.1□□□□□ -0.63
RNU5A-4P-201ENST00000516588 MRGPRX2Q96LB1 330 aa11.09□□□□□ -0.63
RNU5A-4P-201ENST00000516588 TERTO14746 1132 aaKnown RBP11.08□□□□□ -0.64
RNU5A-4P-201ENST00000516588 MSS51Q4VC12 460 aa11.08□□□□□ -0.64
RNU5A-4P-201ENST00000516588 HPS1Q92902 700 aa11.08□□□□□ -0.64
RNU5A-4P-201ENST00000516588 INSM1Q01101 510 aaPredicted RBP11.07□□□□□ -0.64
RNU5A-4P-201ENST00000516588 TRIM32Q13049 653 aa11.07□□□□□ -0.64
RNU5A-4P-201ENST00000516588 TRIM47Q96LD4 638 aa11.06□□□□□ -0.64
RNU5A-4P-201ENST00000516588 TESPA1A2RU30 521 aaPredicted RBP11.05□□□□□ -0.64
RNU5A-4P-201ENST00000516588 MMP16P51512 607 aa11.03□□□□□ -0.64
RNU5A-4P-201ENST00000516588 P3H3Q8IVL6 736 aa11.03□□□□□ -0.64
RNU5A-4P-201ENST00000516588 SULF1Q8IWU6 871 aa11.03□□□□□ -0.64
RNU5A-4P-201ENST00000516588 SKOR1P84550 965 aa11□□□□□ -0.65
RNU5A-4P-201ENST00000516588 SENP2Q9HC62 589 aa11□□□□□ -0.65
RNU5A-4P-201ENST00000516588 GRIPAP1Q4V328 841 aa10.98□□□□□ -0.65
RNU5A-4P-201ENST00000516588 RC3H1Q5TC82 1133 aaKnown RBP10.98□□□□□ -0.65
RNU5A-4P-201ENST00000516588 DXOO77932 396 aaKnown RBP10.97□□□□□ -0.65
RNU5A-4P-201ENST00000516588 HLA-CQ95604 372 aa10.97□□□□□ -0.65
RNU5A-4P-201ENST00000516588 Q3C1V9 767 aa10.96□□□□□ -0.65
RNU5A-4P-201ENST00000516588 CCDC24Q8N4L8 307 aa10.96□□□□□ -0.65
RNU5A-4P-201ENST00000516588 USB1Q9BQ65 265 aaKnown RBP10.96□□□□□ -0.65
RNU5A-4P-201ENST00000516588 CD46P15529 392 aa10.94□□□□□ -0.66
RNU5A-4P-201ENST00000516588 SMYD5Q6GMV2 418 aa10.94□□□□□ -0.66
RNU5A-4P-201ENST00000516588 LORP23490 312 aaPredicted RBP10.93□□□□□ -0.66
RNU5A-4P-201ENST00000516588 KIFC2Q96AC6 838 aa10.93□□□□□ -0.66
RNU5A-4P-201ENST00000516588 REPIN1Q9BWE0 567 aaKnown RBP10.92□□□□□ -0.66
RNU5A-4P-201ENST00000516588 KDM4AO75164 1064 aa10.9□□□□□ -0.66
RNU5A-4P-201ENST00000516588 ALDH1A1P00352 501 aa10.9□□□□□ -0.66
RNU5A-4P-201ENST00000516588 GMPRP36959 345 aa10.9□□□□□ -0.66
RNU5A-4P-201ENST00000516588 NXF1Q9UBU9 619 aaKnown RBP10.89□□□□□ -0.67
RNU5A-4P-201ENST00000516588 SIAH2O43255 324 aa10.88□□□□□ -0.67
RNU5A-4P-201ENST00000516588 VEGFBP49765 207 aa10.88□□□□□ -0.67
RNU5A-4P-201ENST00000516588 WNT7BP56706 349 aa10.88□□□□□ -0.67
RNU5A-4P-201ENST00000516588 TRIM46Q7Z4K8 759 aa10.88□□□□□ -0.67
RNU5A-4P-201ENST00000516588 BMP1P13497 986 aa10.87□□□□□ -0.67
RNU5A-4P-201ENST00000516588 GUCA2AQ02747 115 aa10.87□□□□□ -0.67
RNU5A-4P-201ENST00000516588 PTCRAQ6ISU1 281 aaPredicted RBP10.87□□□□□ -0.67
RNU5A-4P-201ENST00000516588 SYMPKQ92797 1274 aaKnown RBP10.87□□□□□ -0.67
RNU5A-4P-201ENST00000516588 SLC16A10Q8TF71 515 aa10.86□□□□□ -0.67
RNU5A-4P-201ENST00000516588 GPIHBP1Q8IV16 184 aa10.83□□□□□ -0.68
RNU5A-4P-201ENST00000516588 CAPN5O15484 640 aaPredicted RBP10.82□□□□□ -0.68
RNU5A-4P-201ENST00000516588 HOXA2O43364 376 aa10.82□□□□□ -0.68
RNU5A-4P-201ENST00000516588 ZSCAN1Q8NBB4 408 aa10.82□□□□□ -0.68
RNU5A-4P-201ENST00000516588 ERBB4Q15303 1308 aa10.82□□□□□ -0.68
RNU5A-4P-201ENST00000516588 JUNDP17535 347 aa10.81□□□□□ -0.68
RNU5A-4P-201ENST00000516588 MDM2Q00987 491 aaPredicted RBP10.81□□□□□ -0.68
RNU5A-4P-201ENST00000516588 EHBP1Q8NDI1 1231 aa10.8□□□□□ -0.68
RNU5A-4P-201ENST00000516588 USP46P62068 366 aa10.79□□□□□ -0.68
RNU5A-4P-201ENST00000516588 IRF7Q92985 503 aa10.79□□□□□ -0.68
RNU5A-4P-201ENST00000516588 LOC100996750A0A140TA64 210 aa10.78□□□□□ -0.68
RNU5A-4P-201ENST00000516588 FAM181BA6NEQ2 426 aa10.78□□□□□ -0.68
RNU5A-4P-201ENST00000516588 H3BM21 787 aa10.78□□□□□ -0.68
RNU5A-4P-201ENST00000516588 KRTAP4-6Q9BYQ5 205 aa10.78□□□□□ -0.68
RNU5A-4P-201ENST00000516588 SH3BP2P78314 561 aa10.77□□□□□ -0.69
RNU5A-4P-201ENST00000516588 NPAS3Q8IXF0 933 aa10.77□□□□□ -0.69
RNU5A-4P-201ENST00000516588 ZFP42Q96MM3 310 aa10.77□□□□□ -0.69
RNU5A-4P-201ENST00000516588 NUDT12Q9BQG2 462 aa10.77□□□□□ -0.69
RNU5A-4P-201ENST00000516588 WASF2Q9Y6W5 498 aa10.77□□□□□ -0.69
RNU5A-4P-201ENST00000516588 IRF6O14896 467 aa10.76□□□□□ -0.69
RNU5A-4P-201ENST00000516588 MAP2K5Q13163 448 aa10.76□□□□□ -0.69
RNU5A-4P-201ENST00000516588 PCDHGC3Q9UN70 934 aa10.73□□□□□ -0.69
RNU5A-4P-201ENST00000516588 RETREG3Q86VR2 466 aa10.72□□□□□ -0.69
RNU5A-4P-201ENST00000516588 BCANQ96GW7 911 aa10.7□□□□□ -0.7
RNU5A-4P-201ENST00000516588 TLL2Q9Y6L7 1015 aa10.7□□□□□ -0.7
RNU5A-4P-201ENST00000516588 SOBPA7XYQ1 873 aa10.69□□□□□ -0.7
RNU5A-4P-201ENST00000516588 LINC01559Q495D7 138 aa10.69□□□□□ -0.7
RNU5A-4P-201ENST00000516588 BAP1Q92560 729 aa10.69□□□□□ -0.7
RNU5A-4P-201ENST00000516588 FAM217BQ9NTX9 383 aaPredicted RBP10.69□□□□□ -0.7
RNU5A-4P-201ENST00000516588 CCNYL3P0C7X3 344 aa10.67□□□□□ -0.7
RNU5A-4P-201ENST00000516588 MINK1Q8N4C8 1332 aaPredicted RBP10.66□□□□□ -0.7
RNU5A-4P-201ENST00000516588 FDX1P10109 184 aa10.66□□□□□ -0.7
RNU5A-4P-201ENST00000516588 NUTM1Q86Y26 1132 aa10.66□□□□□ -0.7
RNU5A-4P-201ENST00000516588 UNC93B1Q9H1C4 597 aa10.66□□□□□ -0.7
RNU5A-4P-201ENST00000516588 EVA1BQ9NVM1 165 aa10.66□□□□□ -0.7
RNU5A-4P-201ENST00000516588 C6orf229H3BNL8 230 aa10.65□□□□□ -0.7
RNU5A-4P-201ENST00000516588 MS4A1P11836 297 aa10.65□□□□□ -0.7
RNU5A-4P-201ENST00000516588 MRPL14Q6P1L8 145 aaKnown RBP10.65□□□□□ -0.7
RNU5A-4P-201ENST00000516588 CCDC102AQ96A19 550 aa10.65□□□□□ -0.7
RNU5A-4P-201ENST00000516588 PURBQ96QR8 312 aaKnown RBP10.65□□□□□ -0.7
RNU5A-4P-201ENST00000516588 GPCPD1Q9NPB8 672 aa10.65□□□□□ -0.7
RNU5A-4P-201ENST00000516588 NNTQ13423 1086 aa10.64□□□□□ -0.71
RNU5A-4P-201ENST00000516588 TIMP2P16035 220 aa10.62□□□□□ -0.71
RNU5A-4P-201ENST00000516588 KLF16Q9BXK1 252 aaPredicted RBP10.62□□□□□ -0.71
RNU5A-4P-201ENST00000516588 NDUFV2P19404 249 aa10.61□□□□□ -0.71
RNU5A-4P-201ENST00000516588 KCNH2Q12809 1159 aa10.61□□□□□ -0.71
RNU5A-4P-201ENST00000516588 PTPRNQ16849 979 aa10.61□□□□□ -0.71
RNU5A-4P-201ENST00000516588 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.61□□□□□ -0.71
RNU5A-4P-201ENST00000516588 ZNF511Q8NB15 262 aa10.61□□□□□ -0.71
RNU5A-4P-201ENST00000516588 VARSP26640 1264 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms