RNA–Protein interactions for RNA: ENST00000516546.1

RN7SKP287-201, Transcript of RNA, 7SK small nuclear pseudogene 287, humanhuman

BASIC

Gene RN7SKP287, Length 266 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP287-201ENST00000516546 EMID1Q96A84 441 aaPredicted RBP11.37□□□□□ -0.59
RN7SKP287-201ENST00000516546 SYMPKQ92797 1274 aaKnown RBP11.36□□□□□ -0.59
RN7SKP287-201ENST00000516546 SLC19A1P41440 591 aa11.35□□□□□ -0.59
RN7SKP287-201ENST00000516546 PLA2G2CQ5R387 149 aa11.35□□□□□ -0.59
RN7SKP287-201ENST00000516546 IRX2Q9BZI1 471 aaPredicted RBP11.34□□□□□ -0.59
RN7SKP287-201ENST00000516546 GPBP1L1Q9HC44 474 aaPredicted RBP11.34□□□□□ -0.59
RN7SKP287-201ENST00000516546 FCF1Q9Y324 198 aaKnown RBP11.34□□□□□ -0.59
RN7SKP287-201ENST00000516546 C6orf229H3BNL8 230 aa11.33□□□□□ -0.6
RN7SKP287-201ENST00000516546 GJA5P36382 358 aa11.33□□□□□ -0.6
RN7SKP287-201ENST00000516546 MMP16P51512 607 aa11.33□□□□□ -0.6
RN7SKP287-201ENST00000516546 RSBN1LQ6PCB5 846 aaPredicted RBP11.33□□□□□ -0.6
RN7SKP287-201ENST00000516546 KDM4CQ9H3R0 1056 aa11.33□□□□□ -0.6
RN7SKP287-201ENST00000516546 TPRNQ4KMQ1 711 aa11.32□□□□□ -0.6
RN7SKP287-201ENST00000516546 LIAT1Q6ZQX7 453 aa11.32□□□□□ -0.6
RN7SKP287-201ENST00000516546 RETREG3Q86VR2 466 aa11.32□□□□□ -0.6
RN7SKP287-201ENST00000516546 DXOO77932 396 aaKnown RBP11.31□□□□□ -0.6
RN7SKP287-201ENST00000516546 SPTLC1O15269 473 aa11.3□□□□□ -0.6
RN7SKP287-201ENST00000516546 SPRYD7Q5W111 196 aa11.3□□□□□ -0.6
RN7SKP287-201ENST00000516546 MYSM1Q5VVJ2 828 aa11.29□□□□□ -0.6
RN7SKP287-201ENST00000516546 RIC3Q7Z5B4 369 aa11.29□□□□□ -0.6
RN7SKP287-201ENST00000516546 JUNDP17535 347 aa11.28□□□□□ -0.6
RN7SKP287-201ENST00000516546 MTMR2Q13614 643 aa11.28□□□□□ -0.6
RN7SKP287-201ENST00000516546 PCDHB15Q9Y5E8 787 aa11.28□□□□□ -0.6
RN7SKP287-201ENST00000516546 SPDYE5A6NIY4 337 aa11.26□□□□□ -0.61
RN7SKP287-201ENST00000516546 ZNF598Q86UK7 904 aaKnown RBP11.26□□□□□ -0.61
RN7SKP287-201ENST00000516546 FAM117AQ9C073 453 aa11.26□□□□□ -0.61
RN7SKP287-201ENST00000516546 RPIAP49247 311 aa11.25□□□□□ -0.61
RN7SKP287-201ENST00000516546 RSPH6AQ9H0K4 717 aa11.25□□□□□ -0.61
RN7SKP287-201ENST00000516546 LIMD1Q9UGP4 676 aa11.25□□□□□ -0.61
RN7SKP287-201ENST00000516546 ZNF697Q5TEC3 545 aa11.24□□□□□ -0.61
RN7SKP287-201ENST00000516546 PRR7Q8TB68 274 aa11.24□□□□□ -0.61
RN7SKP287-201ENST00000516546 DDRGK1Q96HY6 314 aa11.24□□□□□ -0.61
RN7SKP287-201ENST00000516546 GFRA3O60609 400 aa11.23□□□□□ -0.61
RN7SKP287-201ENST00000516546 CSPP1Q1MSJ5 1256 aa11.23□□□□□ -0.61
RN7SKP287-201ENST00000516546 PRPF38BQ5VTL8 546 aaKnown RBP11.23□□□□□ -0.61
RN7SKP287-201ENST00000516546 ZBTB3Q9H5J0 574 aa11.23□□□□□ -0.61
RN7SKP287-201ENST00000516546 ZBTB24O43167 697 aaPredicted RBP11.22□□□□□ -0.61
RN7SKP287-201ENST00000516546 HRCP23327 699 aa11.22□□□□□ -0.61
RN7SKP287-201ENST00000516546 CLK2P49760 499 aaKnown RBP11.22□□□□□ -0.61
RN7SKP287-201ENST00000516546 TUSC1Q2TAM9 212 aa11.22□□□□□ -0.61
RN7SKP287-201ENST00000516546 PDZRN3Q9UPQ7 1066 aa11.22□□□□□ -0.61
RN7SKP287-201ENST00000516546 CD2BP2O95400 341 aaKnown RBP11.21□□□□□ -0.61
RN7SKP287-201ENST00000516546 LAPTM4AQ15012 233 aa11.21□□□□□ -0.61
RN7SKP287-201ENST00000516546 NEUROD2Q15784 382 aa11.21□□□□□ -0.61
RN7SKP287-201ENST00000516546 TRIM67Q6ZTA4 783 aa11.21□□□□□ -0.61
RN7SKP287-201ENST00000516546 CCDC24Q8N4L8 307 aa11.21□□□□□ -0.61
RN7SKP287-201ENST00000516546 CABLES1Q8TDN4 633 aa11.21□□□□□ -0.61
RN7SKP287-201ENST00000516546 POLR3EQ9NVU0 708 aa11.21□□□□□ -0.61
RN7SKP287-201ENST00000516546 PLEKHG3A1L390 1219 aa11.2□□□□□ -0.62
RN7SKP287-201ENST00000516546 DESI1Q6ICB0 168 aa11.2□□□□□ -0.62
RN7SKP287-201ENST00000516546 NUDT12Q9BQG2 462 aa11.2□□□□□ -0.62
RN7SKP287-201ENST00000516546 CFAP99D6REC4 459 aa11.19□□□□□ -0.62
RN7SKP287-201ENST00000516546 QPCTQ16769 361 aa11.19□□□□□ -0.62
RN7SKP287-201ENST00000516546 NRG2O14511 850 aaPredicted RBP11.18□□□□□ -0.62
RN7SKP287-201ENST00000516546 LILRB3O75022 631 aa11.18□□□□□ -0.62
RN7SKP287-201ENST00000516546 TRIM32Q13049 653 aa11.18□□□□□ -0.62
RN7SKP287-201ENST00000516546 PTPRNQ16849 979 aa11.18□□□□□ -0.62
RN7SKP287-201ENST00000516546 CCNYL3P0C7X3 344 aa11.17□□□□□ -0.62
RN7SKP287-201ENST00000516546 BRPF1P55201 1214 aaPredicted RBP11.17□□□□□ -0.62
RN7SKP287-201ENST00000516546 SH3D19Q5HYK7 790 aa11.17□□□□□ -0.62
RN7SKP287-201ENST00000516546 NUTM2BA6NNL0 878 aaPredicted RBP11.16□□□□□ -0.62
RN7SKP287-201ENST00000516546 NUTM2EB1AL46 878 aaPredicted RBP11.16□□□□□ -0.62
RN7SKP287-201ENST00000516546 GDF9O60383 454 aa11.16□□□□□ -0.62
RN7SKP287-201ENST00000516546 PRR20EP86478 221 aa11.16□□□□□ -0.62
RN7SKP287-201ENST00000516546 PRR20CP86479 221 aa11.16□□□□□ -0.62
RN7SKP287-201ENST00000516546 PRR20DP86480 221 aa11.16□□□□□ -0.62
RN7SKP287-201ENST00000516546 PRR20BP86481 221 aa11.16□□□□□ -0.62
RN7SKP287-201ENST00000516546 PRR20AP86496 221 aa11.16□□□□□ -0.62
RN7SKP287-201ENST00000516546 SKIV2LQ15477 1246 aaKnown RBP11.16□□□□□ -0.62
RN7SKP287-201ENST00000516546 NUTM2DQ5VT03 806 aaPredicted RBP11.16□□□□□ -0.62
RN7SKP287-201ENST00000516546 NUTM2AQ8IVF1 878 aaPredicted RBP11.16□□□□□ -0.62
RN7SKP287-201ENST00000516546 PKD2L1Q9P0L9 805 aa11.15□□□□□ -0.62
RN7SKP287-201ENST00000516546 TNFRSF10AO00220 468 aa11.14□□□□□ -0.63
RN7SKP287-201ENST00000516546 FOXC1Q12948 553 aa11.14□□□□□ -0.63
RN7SKP287-201ENST00000516546 PTCRAQ6ISU1 281 aaPredicted RBP11.14□□□□□ -0.63
RN7SKP287-201ENST00000516546 Q6ZNB5 142 aa11.14□□□□□ -0.63
RN7SKP287-201ENST00000516546 RTL5Q5HYW3 569 aaPredicted RBP11.13□□□□□ -0.63
RN7SKP287-201ENST00000516546 LYPD8Q6UX82 237 aa11.13□□□□□ -0.63
RN7SKP287-201ENST00000516546 EVA1BQ9NVM1 165 aa11.13□□□□□ -0.63
RN7SKP287-201ENST00000516546 PRKCSHP14314 528 aaPredicted RBP11.11□□□□□ -0.63
RN7SKP287-201ENST00000516546 PROCA1Q8NCQ7 364 aaPredicted RBP11.11□□□□□ -0.63
RN7SKP287-201ENST00000516546 TSC1Q92574 1164 aa11.11□□□□□ -0.63
RN7SKP287-201ENST00000516546 KCNH2Q12809 1159 aa11.1□□□□□ -0.63
RN7SKP287-201ENST00000516546 IL27Q8NEV9 243 aa11.1□□□□□ -0.63
RN7SKP287-201ENST00000516546 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.1□□□□□ -0.63
RN7SKP287-201ENST00000516546 WNT7AO00755 349 aa11.08□□□□□ -0.64
RN7SKP287-201ENST00000516546 PER1O15534 1290 aaPredicted RBP11.08□□□□□ -0.64
RN7SKP287-201ENST00000516546 WNT7BP56706 349 aa11.08□□□□□ -0.64
RN7SKP287-201ENST00000516546 HELBQ8NG08 1087 aaPredicted RBP11.08□□□□□ -0.64
RN7SKP287-201ENST00000516546 UNC93B1Q9H1C4 597 aa11.08□□□□□ -0.64
RN7SKP287-201ENST00000516546 ATP1B4Q9UN42 357 aaPredicted RBP11.08□□□□□ -0.64
RN7SKP287-201ENST00000516546 SKOR1P84550 965 aa11.07□□□□□ -0.64
RN7SKP287-201ENST00000516546 FBXO31Q5XUX0 539 aaPredicted RBP11.07□□□□□ -0.64
RN7SKP287-201ENST00000516546 F12P00748 615 aaPredicted RBP11.06□□□□□ -0.64
RN7SKP287-201ENST00000516546 CTHP32929 405 aa11.06□□□□□ -0.64
RN7SKP287-201ENST00000516546 GOPCQ9HD26 462 aa11.06□□□□□ -0.64
RN7SKP287-201ENST00000516546 PPP2R2DQ66LE6 453 aa11.05□□□□□ -0.64
RN7SKP287-201ENST00000516546 TOR4AQ9NXH8 423 aa11.05□□□□□ -0.64
RN7SKP287-201ENST00000516546 MAP10Q9P2G4 905 aa11.05□□□□□ -0.64
RN7SKP287-201ENST00000516546 LCE2BO14633 110 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms