RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 SSTR3P32745 418 aaPredicted RBP7.62□□□□□ -1.19
RNU4-49P-201ENST00000516080 TRIM67Q6ZTA4 783 aa7.62□□□□□ -1.19
RNU4-49P-201ENST00000516080 REPIN1Q9BWE0 567 aaKnown RBP7.62□□□□□ -1.19
RNU4-49P-201ENST00000516080 PRDM9Q9NQV7 894 aa7.61□□□□□ -1.19
RNU4-49P-201ENST00000516080 MMP16P51512 607 aa7.6□□□□□ -1.19
RNU4-49P-201ENST00000516080 HLA-CQ95604 372 aa7.6□□□□□ -1.19
RNU4-49P-201ENST00000516080 AK7Q96M32 723 aa7.6□□□□□ -1.19
RNU4-49P-201ENST00000516080 ZBTB24O43167 697 aaPredicted RBP7.59□□□□□ -1.19
RNU4-49P-201ENST00000516080 GIGYF2Q6Y7W6 1299 aaKnown RBP7.59□□□□□ -1.19
RNU4-49P-201ENST00000516080 GDF9O60383 454 aa7.58□□□□□ -1.2
RNU4-49P-201ENST00000516080 DXOO77932 396 aaKnown RBP7.58□□□□□ -1.2
RNU4-49P-201ENST00000516080 LCE2BO14633 110 aa7.57□□□□□ -1.2
RNU4-49P-201ENST00000516080 TRIM66O15016 1216 aa7.57□□□□□ -1.2
RNU4-49P-201ENST00000516080 DGAT1O75907 488 aa7.57□□□□□ -1.2
RNU4-49P-201ENST00000516080 FDX1P10109 184 aa7.57□□□□□ -1.2
RNU4-49P-201ENST00000516080 GUCA2AQ02747 115 aa7.57□□□□□ -1.2
RNU4-49P-201ENST00000516080 PKDCCQ504Y2 493 aa7.57□□□□□ -1.2
RNU4-49P-201ENST00000516080 SPIRE2Q8WWL2 714 aa7.57□□□□□ -1.2
RNU4-49P-201ENST00000516080 TNFRSF10AO00220 468 aa7.56□□□□□ -1.2
RNU4-49P-201ENST00000516080 FOXC1Q12948 553 aa7.56□□□□□ -1.2
RNU4-49P-201ENST00000516080 DIXDC1Q155Q3 683 aa7.56□□□□□ -1.2
RNU4-49P-201ENST00000516080 RETREG3Q86VR2 466 aa7.56□□□□□ -1.2
RNU4-49P-201ENST00000516080 PARP9Q8IXQ6 854 aa7.55□□□□□ -1.2
RNU4-49P-201ENST00000516080 BEGAINQ9BUH8 593 aa7.55□□□□□ -1.2
RNU4-49P-201ENST00000516080 PKD2L1Q9P0L9 805 aa7.55□□□□□ -1.2
RNU4-49P-201ENST00000516080 C6orf229H3BNL8 230 aa7.54□□□□□ -1.2
RNU4-49P-201ENST00000516080 JUNDP17535 347 aa7.54□□□□□ -1.2
RNU4-49P-201ENST00000516080 SYMPKQ92797 1274 aaKnown RBP7.54□□□□□ -1.2
RNU4-49P-201ENST00000516080 FAM187AA6NFU0 413 aa7.53□□□□□ -1.2
RNU4-49P-201ENST00000516080 MOXD2PA6NHM9 499 aa7.53□□□□□ -1.2
RNU4-49P-201ENST00000516080 GJA5P36382 358 aa7.53□□□□□ -1.2
RNU4-49P-201ENST00000516080 TRIM32Q13049 653 aa7.53□□□□□ -1.2
RNU4-49P-201ENST00000516080 CCDC24Q8N4L8 307 aa7.53□□□□□ -1.2
RNU4-49P-201ENST00000516080 PCDHGC3Q9UN70 934 aa7.53□□□□□ -1.2
RNU4-49P-201ENST00000516080 SPDYE5A6NIY4 337 aa7.51□□□□□ -1.21
RNU4-49P-201ENST00000516080 WNT7AO00755 349 aa7.51□□□□□ -1.21
RNU4-49P-201ENST00000516080 NDUFV2P19404 249 aa7.51□□□□□ -1.21
RNU4-49P-201ENST00000516080 MYT1Q01538 1121 aa7.51□□□□□ -1.21
RNU4-49P-201ENST00000516080 CYP4X1Q8N118 509 aa7.51□□□□□ -1.21
RNU4-49P-201ENST00000516080 TBC1D2Q9BYX2 928 aa7.51□□□□□ -1.21
RNU4-49P-201ENST00000516080 MS4A1P11836 297 aa7.5□□□□□ -1.21
RNU4-49P-201ENST00000516080 PDE4DQ08499 809 aa7.5□□□□□ -1.21
RNU4-49P-201ENST00000516080 BCANQ96GW7 911 aa7.5□□□□□ -1.21
RNU4-49P-201ENST00000516080 TOR4AQ9NXH8 423 aa7.5□□□□□ -1.21
RNU4-49P-201ENST00000516080 SLC24A1O60721 1099 aa7.49□□□□□ -1.21
RNU4-49P-201ENST00000516080 MTMR2Q13614 643 aa7.49□□□□□ -1.21
RNU4-49P-201ENST00000516080 NUDT12Q9BQG2 462 aa7.49□□□□□ -1.21
RNU4-49P-201ENST00000516080 SLC24A3Q9HC58 644 aa7.49□□□□□ -1.21
RNU4-49P-201ENST00000516080 TTC24A2A3L6 582 aaPredicted RBP7.48□□□□□ -1.21
RNU4-49P-201ENST00000516080 WNT7BP56706 349 aa7.48□□□□□ -1.21
RNU4-49P-201ENST00000516080 DESI1Q6ICB0 168 aa7.48□□□□□ -1.21
RNU4-49P-201ENST00000516080 RSBN1LQ6PCB5 846 aaPredicted RBP7.48□□□□□ -1.21
RNU4-49P-201ENST00000516080 SPTLC1O15269 473 aa7.47□□□□□ -1.21
RNU4-49P-201ENST00000516080 CCNYL3P0C7X3 344 aa7.47□□□□□ -1.21
RNU4-49P-201ENST00000516080 PTPRNQ16849 979 aa7.47□□□□□ -1.21
RNU4-49P-201ENST00000516080 ZNF787Q6DD87 383 aa7.47□□□□□ -1.21
RNU4-49P-201ENST00000516080 SNIP1Q8TAD8 396 aaKnown RBP7.47□□□□□ -1.21
RNU4-49P-201ENST00000516080 PRR7Q8TB68 274 aa7.47□□□□□ -1.21
RNU4-49P-201ENST00000516080 RC3H1Q5TC82 1133 aaKnown RBP7.45□□□□□ -1.22
RNU4-49P-201ENST00000516080 PRPF38BQ5VTL8 546 aaKnown RBP7.45□□□□□ -1.22
RNU4-49P-201ENST00000516080 RIC3Q7Z5B4 369 aa7.45□□□□□ -1.22
RNU4-49P-201ENST00000516080 MRGPRX2Q96LB1 330 aa7.45□□□□□ -1.22
RNU4-49P-201ENST00000516080 AVPP01185 164 aa7.44□□□□□ -1.22
RNU4-49P-201ENST00000516080 CTC1Q2NKJ3 1217 aa7.44□□□□□ -1.22
RNU4-49P-201ENST00000516080 PTCRAQ6ISU1 281 aaPredicted RBP7.44□□□□□ -1.22
RNU4-49P-201ENST00000516080 CRIPAKQ8N1N5 446 aa7.44□□□□□ -1.22
RNU4-49P-201ENST00000516080 ZBTB3Q9H5J0 574 aa7.44□□□□□ -1.22
RNU4-49P-201ENST00000516080 EVA1BQ9NVM1 165 aa7.44□□□□□ -1.22
RNU4-49P-201ENST00000516080 PCDHB15Q9Y5E8 787 aa7.44□□□□□ -1.22
RNU4-49P-201ENST00000516080 SKOR1P84550 965 aa7.43□□□□□ -1.22
RNU4-49P-201ENST00000516080 AAASQ9NRG9 546 aa7.43□□□□□ -1.22
RNU4-49P-201ENST00000516080 HRCP23327 699 aa7.42□□□□□ -1.22
RNU4-49P-201ENST00000516080 KCNH2Q12809 1159 aa7.42□□□□□ -1.22
RNU4-49P-201ENST00000516080 TUSC1Q2TAM9 212 aa7.42□□□□□ -1.22
RNU4-49P-201ENST00000516080 MYSM1Q5VVJ2 828 aa7.42□□□□□ -1.22
RNU4-49P-201ENST00000516080 RSPH6AQ9H0K4 717 aa7.42□□□□□ -1.22
RNU4-49P-201ENST00000516080 AXIN1O15169 862 aa7.41□□□□□ -1.22
RNU4-49P-201ENST00000516080 ST8SIA5O15466 376 aa7.41□□□□□ -1.22
RNU4-49P-201ENST00000516080 SMPD1P17405 629 aa7.41□□□□□ -1.22
RNU4-49P-201ENST00000516080 SMCPP49901 116 aaPredicted RBP7.41□□□□□ -1.22
RNU4-49P-201ENST00000516080 LYPD8Q6UX82 237 aa7.41□□□□□ -1.22
RNU4-49P-201ENST00000516080 EHBP1Q8NDI1 1231 aa7.4□□□□□ -1.22
RNU4-49P-201ENST00000516080 UNC93B1Q9H1C4 597 aa7.4□□□□□ -1.22
RNU4-49P-201ENST00000516080 NUTM2BA6NNL0 878 aaPredicted RBP7.39□□□□□ -1.23
RNU4-49P-201ENST00000516080 NUTM2EB1AL46 878 aaPredicted RBP7.39□□□□□ -1.23
RNU4-49P-201ENST00000516080 CFAP99D6REC4 459 aa7.39□□□□□ -1.23
RNU4-49P-201ENST00000516080 J3QL48 77 aa7.39□□□□□ -1.23
RNU4-49P-201ENST00000516080 CSPP1Q1MSJ5 1256 aa7.39□□□□□ -1.23
RNU4-49P-201ENST00000516080 NUTM2DQ5VT03 806 aaPredicted RBP7.39□□□□□ -1.23
RNU4-49P-201ENST00000516080 NUTM2AQ8IVF1 878 aaPredicted RBP7.39□□□□□ -1.23
RNU4-49P-201ENST00000516080 LIMD1Q9UGP4 676 aa7.39□□□□□ -1.23
RNU4-49P-201ENST00000516080 SH3BP2P78314 561 aa7.38□□□□□ -1.23
RNU4-49P-201ENST00000516080 CABLES1Q8TDN4 633 aa7.38□□□□□ -1.23
RNU4-49P-201ENST00000516080 LILRB3O75022 631 aa7.37□□□□□ -1.23
RNU4-49P-201ENST00000516080 ALDH1A1P00352 501 aa7.37□□□□□ -1.23
RNU4-49P-201ENST00000516080 CTHP32929 405 aa7.37□□□□□ -1.23
RNU4-49P-201ENST00000516080 CLK2P49760 499 aaKnown RBP7.37□□□□□ -1.23
RNU4-49P-201ENST00000516080 BAP1Q92560 729 aa7.37□□□□□ -1.23
RNU4-49P-201ENST00000516080 POTECB2RU33 542 aa7.36□□□□□ -1.23
RNU4-49P-201ENST00000516080 SIAH2O43255 324 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms