RNA–Protein interactions for RNA: ENST00000515943.1

RNU4-29P-201, Transcript of RNA, U4 small nuclear 29, pseudogene, humanhuman

BASIC

Gene RNU4-29P, Length 174 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-29P-201ENST00000515943 GJA5P36382 358 aa7.33□□□□□ -1.24
RNU4-29P-201ENST00000515943 ANKLE1Q8NAG6 615 aa7.33□□□□□ -1.24
RNU4-29P-201ENST00000515943 USB1Q9BQ65 265 aaKnown RBP7.33□□□□□ -1.24
RNU4-29P-201ENST00000515943 PPEF1O14829 653 aaPredicted RBP7.32□□□□□ -1.24
RNU4-29P-201ENST00000515943 MYSM1Q5VVJ2 828 aa7.32□□□□□ -1.24
RNU4-29P-201ENST00000515943 SYMPKQ92797 1274 aaKnown RBP7.32□□□□□ -1.24
RNU4-29P-201ENST00000515943 FAM117AQ9C073 453 aa7.32□□□□□ -1.24
RNU4-29P-201ENST00000515943 PRKCSHP14314 528 aaPredicted RBP7.31□□□□□ -1.24
RNU4-29P-201ENST00000515943 NEUROD2Q15784 382 aa7.31□□□□□ -1.24
RNU4-29P-201ENST00000515943 RETREG3Q86VR2 466 aa7.31□□□□□ -1.24
RNU4-29P-201ENST00000515943 DDRGK1Q96HY6 314 aa7.31□□□□□ -1.24
RNU4-29P-201ENST00000515943 PLEKHG3A1L390 1219 aa7.3□□□□□ -1.24
RNU4-29P-201ENST00000515943 DXOO77932 396 aaKnown RBP7.3□□□□□ -1.24
RNU4-29P-201ENST00000515943 MMP16P51512 607 aa7.3□□□□□ -1.24
RNU4-29P-201ENST00000515943 BRPF1P55201 1214 aaPredicted RBP7.3□□□□□ -1.24
RNU4-29P-201ENST00000515943 RIC3Q7Z5B4 369 aa7.3□□□□□ -1.24
RNU4-29P-201ENST00000515943 EMID1Q96A84 441 aaPredicted RBP7.3□□□□□ -1.24
RNU4-29P-201ENST00000515943 PRKD2Q9BZL6 878 aa7.3□□□□□ -1.24
RNU4-29P-201ENST00000515943 LIMD1Q9UGP4 676 aa7.3□□□□□ -1.24
RNU4-29P-201ENST00000515943 C6orf229H3BNL8 230 aa7.29□□□□□ -1.24
RNU4-29P-201ENST00000515943 PLA2G2CQ5R387 149 aa7.29□□□□□ -1.24
RNU4-29P-201ENST00000515943 IRX2Q9BZI1 471 aaPredicted RBP7.29□□□□□ -1.24
RNU4-29P-201ENST00000515943 FCF1Q9Y324 198 aaKnown RBP7.29□□□□□ -1.24
RNU4-29P-201ENST00000515943 PCDHB15Q9Y5E8 787 aa7.29□□□□□ -1.24
RNU4-29P-201ENST00000515943 V9GY48 417 aaPredicted RBP7.29□□□□□ -1.24
RNU4-29P-201ENST00000515943 JUNDP17535 347 aa7.28□□□□□ -1.24
RNU4-29P-201ENST00000515943 CLK2P49760 499 aaKnown RBP7.28□□□□□ -1.24
RNU4-29P-201ENST00000515943 MTMR2Q13614 643 aa7.28□□□□□ -1.24
RNU4-29P-201ENST00000515943 TUSC1Q2TAM9 212 aa7.28□□□□□ -1.24
RNU4-29P-201ENST00000515943 RSPH6AQ9H0K4 717 aa7.28□□□□□ -1.24
RNU4-29P-201ENST00000515943 SPDYE5A6NIY4 337 aa7.27□□□□□ -1.25
RNU4-29P-201ENST00000515943 SH3D19Q5HYK7 790 aa7.27□□□□□ -1.25
RNU4-29P-201ENST00000515943 PRPF38BQ5VTL8 546 aaKnown RBP7.27□□□□□ -1.25
RNU4-29P-201ENST00000515943 LIAT1Q6ZQX7 453 aa7.26□□□□□ -1.25
RNU4-29P-201ENST00000515943 ZBTB3Q9H5J0 574 aa7.26□□□□□ -1.25
RNU4-29P-201ENST00000515943 HRCP23327 699 aa7.25□□□□□ -1.25
RNU4-29P-201ENST00000515943 SLC19A1P41440 591 aa7.25□□□□□ -1.25
RNU4-29P-201ENST00000515943 CSPP1Q1MSJ5 1256 aa7.25□□□□□ -1.25
RNU4-29P-201ENST00000515943 PRR7Q8TB68 274 aa7.25□□□□□ -1.25
RNU4-29P-201ENST00000515943 CABLES1Q8TDN4 633 aa7.25□□□□□ -1.25
RNU4-29P-201ENST00000515943 CFAP99D6REC4 459 aa7.24□□□□□ -1.25
RNU4-29P-201ENST00000515943 LILRB3O75022 631 aa7.24□□□□□ -1.25
RNU4-29P-201ENST00000515943 SKIV2LQ15477 1246 aaKnown RBP7.24□□□□□ -1.25
RNU4-29P-201ENST00000515943 QPCTQ16769 361 aa7.24□□□□□ -1.25
RNU4-29P-201ENST00000515943 POLR3EQ9NVU0 708 aa7.24□□□□□ -1.25
RNU4-29P-201ENST00000515943 SPRYD7Q5W111 196 aa7.23□□□□□ -1.25
RNU4-29P-201ENST00000515943 DESI1Q6ICB0 168 aa7.23□□□□□ -1.25
RNU4-29P-201ENST00000515943 RPIAP49247 311 aa7.22□□□□□ -1.25
RNU4-29P-201ENST00000515943 PTPRNQ16849 979 aa7.21□□□□□ -1.26
RNU4-29P-201ENST00000515943 NUDT12Q9BQG2 462 aa7.21□□□□□ -1.26
RNU4-29P-201ENST00000515943 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.21□□□□□ -1.26
RNU4-29P-201ENST00000515943 CCNYL3P0C7X3 344 aa7.2□□□□□ -1.26
RNU4-29P-201ENST00000515943 RTL5Q5HYW3 569 aaPredicted RBP7.2□□□□□ -1.26
RNU4-29P-201ENST00000515943 ZNF598Q86UK7 904 aaKnown RBP7.2□□□□□ -1.26
RNU4-29P-201ENST00000515943 PROCA1Q8NCQ7 364 aaPredicted RBP7.2□□□□□ -1.26
RNU4-29P-201ENST00000515943 IL27Q8NEV9 243 aa7.2□□□□□ -1.26
RNU4-29P-201ENST00000515943 GOPCQ9HD26 462 aa7.2□□□□□ -1.26
RNU4-29P-201ENST00000515943 NUTM2BA6NNL0 878 aaPredicted RBP7.19□□□□□ -1.26
RNU4-29P-201ENST00000515943 NUTM2EB1AL46 878 aaPredicted RBP7.19□□□□□ -1.26
RNU4-29P-201ENST00000515943 ZNF697Q5TEC3 545 aa7.19□□□□□ -1.26
RNU4-29P-201ENST00000515943 NUTM2DQ5VT03 806 aaPredicted RBP7.19□□□□□ -1.26
RNU4-29P-201ENST00000515943 FBXO31Q5XUX0 539 aaPredicted RBP7.19□□□□□ -1.26
RNU4-29P-201ENST00000515943 NUTM2AQ8IVF1 878 aaPredicted RBP7.19□□□□□ -1.26
RNU4-29P-201ENST00000515943 CCDC24Q8N4L8 307 aa7.19□□□□□ -1.26
RNU4-29P-201ENST00000515943 TRIM32Q13049 653 aa7.18□□□□□ -1.26
RNU4-29P-201ENST00000515943 LYPD8Q6UX82 237 aa7.18□□□□□ -1.26
RNU4-29P-201ENST00000515943 TRIM67Q6ZTA4 783 aa7.18□□□□□ -1.26
RNU4-29P-201ENST00000515943 ZBTB24O43167 697 aaPredicted RBP7.17□□□□□ -1.26
RNU4-29P-201ENST00000515943 PPP2R2DQ66LE6 453 aa7.17□□□□□ -1.26
RNU4-29P-201ENST00000515943 CD2BP2O95400 341 aaKnown RBP7.16□□□□□ -1.26
RNU4-29P-201ENST00000515943 PTCRAQ6ISU1 281 aaPredicted RBP7.16□□□□□ -1.26
RNU4-29P-201ENST00000515943 HELBQ8NG08 1087 aaPredicted RBP7.16□□□□□ -1.26
RNU4-29P-201ENST00000515943 EVA1BQ9NVM1 165 aa7.16□□□□□ -1.26
RNU4-29P-201ENST00000515943 PER1O15534 1290 aaPredicted RBP7.15□□□□□ -1.26
RNU4-29P-201ENST00000515943 GDF9O60383 454 aa7.15□□□□□ -1.26
RNU4-29P-201ENST00000515943 F12P00748 615 aaPredicted RBP7.15□□□□□ -1.26
RNU4-29P-201ENST00000515943 PRR20EP86478 221 aa7.15□□□□□ -1.26
RNU4-29P-201ENST00000515943 PRR20CP86479 221 aa7.15□□□□□ -1.26
RNU4-29P-201ENST00000515943 PRR20DP86480 221 aa7.15□□□□□ -1.26
RNU4-29P-201ENST00000515943 PRR20BP86481 221 aa7.15□□□□□ -1.26
RNU4-29P-201ENST00000515943 PRR20AP86496 221 aa7.15□□□□□ -1.26
RNU4-29P-201ENST00000515943 KCNH2Q12809 1159 aa7.15□□□□□ -1.26
RNU4-29P-201ENST00000515943 TSC1Q92574 1164 aa7.15□□□□□ -1.26
RNU4-29P-201ENST00000515943 PCMTD1Q96MG8 357 aaPredicted RBP7.15□□□□□ -1.26
RNU4-29P-201ENST00000515943 PKD2L1Q9P0L9 805 aa7.15□□□□□ -1.26
RNU4-29P-201ENST00000515943 NRG2O14511 850 aaPredicted RBP7.14□□□□□ -1.27
RNU4-29P-201ENST00000515943 GFRA3O60609 400 aa7.14□□□□□ -1.27
RNU4-29P-201ENST00000515943 LAPTM4AQ15012 233 aa7.14□□□□□ -1.27
RNU4-29P-201ENST00000515943 UNC93B1Q9H1C4 597 aa7.14□□□□□ -1.27
RNU4-29P-201ENST00000515943 PDZRN3Q9UPQ7 1066 aa7.14□□□□□ -1.27
RNU4-29P-201ENST00000515943 MAP10Q9P2G4 905 aa7.13□□□□□ -1.27
RNU4-29P-201ENST00000515943 ATP1B4Q9UN42 357 aaPredicted RBP7.13□□□□□ -1.27
RNU4-29P-201ENST00000515943 TNFRSF10AO00220 468 aa7.12□□□□□ -1.27
RNU4-29P-201ENST00000515943 WNT7AO00755 349 aa7.12□□□□□ -1.27
RNU4-29P-201ENST00000515943 WNT7BP56706 349 aa7.12□□□□□ -1.27
RNU4-29P-201ENST00000515943 SKOR1P84550 965 aa7.12□□□□□ -1.27
RNU4-29P-201ENST00000515943 CTHP32929 405 aa7.11□□□□□ -1.27
RNU4-29P-201ENST00000515943 RFC5P40937 340 aa7.11□□□□□ -1.27
RNU4-29P-201ENST00000515943 CTDSPL2Q05D32 466 aa7.11□□□□□ -1.27
RNU4-29P-201ENST00000515943 FOXC1Q12948 553 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms