RNA–Protein interactions for RNA: ENST00000515833.2

MATR3-226, Transcript of matrin 3, humanhuman

TSL 5

Gene MATR3, Length 1,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-226ENST00000515833 NFX1Q12986 1120 aaKnown RBP8.94□□□□□ -0.98
MATR3-226ENST00000515833 SMPD1P17405 629 aa8.93□□□□□ -0.98
MATR3-226ENST00000515833 MSS51Q4VC12 460 aa8.93□□□□□ -0.98
MATR3-226ENST00000515833 SULF1Q8IWU6 871 aa8.93□□□□□ -0.98
MATR3-226ENST00000515833 WNT7AO00755 349 aa8.92□□□□□ -0.98
MATR3-226ENST00000515833 SMYD5Q6GMV2 418 aa8.92□□□□□ -0.98
MATR3-226ENST00000515833 SNIP1Q8TAD8 396 aaKnown RBP8.91□□□□□ -0.98
MATR3-226ENST00000515833 TRIM32Q13049 653 aa8.9□□□□□ -0.98
MATR3-226ENST00000515833 ATP13A2Q9NQ11 1180 aa8.9□□□□□ -0.98
MATR3-226ENST00000515833 J3QL48 77 aa8.89□□□□□ -0.99
MATR3-226ENST00000515833 SNRPBP14678 240 aaKnown RBP8.89□□□□□ -0.99
MATR3-226ENST00000515833 GRIPAP1Q4V328 841 aa8.89□□□□□ -0.99
MATR3-226ENST00000515833 MRGPRX2Q96LB1 330 aa8.89□□□□□ -0.99
MATR3-226ENST00000515833 WIPF1O43516 503 aa8.88□□□□□ -0.99
MATR3-226ENST00000515833 MMP16P51512 607 aa8.87□□□□□ -0.99
MATR3-226ENST00000515833 Q3C1V9 767 aa8.87□□□□□ -0.99
MATR3-226ENST00000515833 LCE2CQ5TA81 110 aa8.87□□□□□ -0.99
MATR3-226ENST00000515833 STK17AQ9UEE5 414 aa8.87□□□□□ -0.99
MATR3-226ENST00000515833 TERTO14746 1132 aaKnown RBP8.85□□□□□ -0.99
MATR3-226ENST00000515833 HPS1Q92902 700 aa8.85□□□□□ -0.99
MATR3-226ENST00000515833 INSM1Q01101 510 aaPredicted RBP8.84□□□□□ -0.99
MATR3-226ENST00000515833 TRIM47Q96LD4 638 aa8.84□□□□□ -0.99
MATR3-226ENST00000515833 USB1Q9BQ65 265 aaKnown RBP8.84□□□□□ -0.99
MATR3-226ENST00000515833 DXOO77932 396 aaKnown RBP8.83□□□□□ -1
MATR3-226ENST00000515833 CCDC24Q8N4L8 307 aa8.83□□□□□ -1
MATR3-226ENST00000515833 SENP2Q9HC62 589 aa8.83□□□□□ -1
MATR3-226ENST00000515833 CD46P15529 392 aa8.82□□□□□ -1
MATR3-226ENST00000515833 RC3H1Q5TC82 1133 aaKnown RBP8.82□□□□□ -1
MATR3-226ENST00000515833 SKOR1P84550 965 aa8.81□□□□□ -1
MATR3-226ENST00000515833 GPIHBP1Q8IV16 184 aa8.81□□□□□ -1
MATR3-226ENST00000515833 HLA-CQ95604 372 aa8.81□□□□□ -1
MATR3-226ENST00000515833 REPIN1Q9BWE0 567 aaKnown RBP8.81□□□□□ -1
MATR3-226ENST00000515833 KDM4AO75164 1064 aa8.8□□□□□ -1
MATR3-226ENST00000515833 WNT7BP56706 349 aa8.78□□□□□ -1
MATR3-226ENST00000515833 KIFC2Q96AC6 838 aa8.78□□□□□ -1
MATR3-226ENST00000515833 ALDH1A1P00352 501 aa8.76□□□□□ -1.01
MATR3-226ENST00000515833 USP46P62068 366 aa8.75□□□□□ -1.01
MATR3-226ENST00000515833 MDM2Q00987 491 aaPredicted RBP8.75□□□□□ -1.01
MATR3-226ENST00000515833 GUCA2AQ02747 115 aa8.74□□□□□ -1.01
MATR3-226ENST00000515833 SYMPKQ92797 1274 aaKnown RBP8.74□□□□□ -1.01
MATR3-226ENST00000515833 HOXA2O43364 376 aa8.73□□□□□ -1.01
MATR3-226ENST00000515833 JUNDP17535 347 aa8.72□□□□□ -1.01
MATR3-226ENST00000515833 PLCB2Q00722 1185 aa8.72□□□□□ -1.01
MATR3-226ENST00000515833 MAP2K5Q13163 448 aa8.72□□□□□ -1.01
MATR3-226ENST00000515833 PTCRAQ6ISU1 281 aaPredicted RBP8.72□□□□□ -1.01
MATR3-226ENST00000515833 SLC16A10Q8TF71 515 aa8.72□□□□□ -1.01
MATR3-226ENST00000515833 IRF6O14896 467 aa8.71□□□□□ -1.02
MATR3-226ENST00000515833 SIAH2O43255 324 aa8.71□□□□□ -1.02
MATR3-226ENST00000515833 NXF1Q9UBU9 619 aaKnown RBP8.71□□□□□ -1.02
MATR3-226ENST00000515833 BMP1P13497 986 aa8.7□□□□□ -1.02
MATR3-226ENST00000515833 TRIM46Q7Z4K8 759 aa8.7□□□□□ -1.02
MATR3-226ENST00000515833 EHBP1Q8NDI1 1231 aa8.7□□□□□ -1.02
MATR3-226ENST00000515833 CAPN5O15484 640 aaPredicted RBP8.69□□□□□ -1.02
MATR3-226ENST00000515833 GMPRP36959 345 aa8.69□□□□□ -1.02
MATR3-226ENST00000515833 NUDT12Q9BQG2 462 aa8.69□□□□□ -1.02
MATR3-226ENST00000515833 WASF2Q9Y6W5 498 aa8.67□□□□□ -1.02
MATR3-226ENST00000515833 MINK1Q8N4C8 1332 aaPredicted RBP8.66□□□□□ -1.02
MATR3-226ENST00000515833 LORP23490 312 aaPredicted RBP8.66□□□□□ -1.02
MATR3-226ENST00000515833 VEGFBP49765 207 aa8.66□□□□□ -1.02
MATR3-226ENST00000515833 RETREG3Q86VR2 466 aa8.66□□□□□ -1.02
MATR3-226ENST00000515833 FAM181BA6NEQ2 426 aa8.65□□□□□ -1.02
MATR3-226ENST00000515833 SH3BP2P78314 561 aa8.65□□□□□ -1.02
MATR3-226ENST00000515833 HAP1P54257 671 aaPredicted RBP8.64□□□□□ -1.03
MATR3-226ENST00000515833 NUTM1Q86Y26 1132 aa8.64□□□□□ -1.03
MATR3-226ENST00000515833 ZSCAN1Q8NBB4 408 aa8.64□□□□□ -1.03
MATR3-226ENST00000515833 IRF7Q92985 503 aa8.64□□□□□ -1.03
MATR3-226ENST00000515833 FAM217BQ9NTX9 383 aaPredicted RBP8.64□□□□□ -1.03
MATR3-226ENST00000515833 NPAS3Q8IXF0 933 aa8.63□□□□□ -1.03
MATR3-226ENST00000515833 CCDC102AQ96A19 550 aa8.63□□□□□ -1.03
MATR3-226ENST00000515833 GPCPD1Q9NPB8 672 aa8.63□□□□□ -1.03
MATR3-226ENST00000515833 PCDHGC3Q9UN70 934 aa8.63□□□□□ -1.03
MATR3-226ENST00000515833 H3BM21 787 aa8.62□□□□□ -1.03
MATR3-226ENST00000515833 FDX1P10109 184 aa8.62□□□□□ -1.03
MATR3-226ENST00000515833 ERBB4Q15303 1308 aa8.61□□□□□ -1.03
MATR3-226ENST00000515833 C6orf229H3BNL8 230 aa8.61□□□□□ -1.03
MATR3-226ENST00000515833 CCNYL3P0C7X3 344 aa8.61□□□□□ -1.03
MATR3-226ENST00000515833 MS4A1P11836 297 aa8.61□□□□□ -1.03
MATR3-226ENST00000515833 CLCN1P35523 988 aa8.61□□□□□ -1.03
MATR3-226ENST00000515833 LINC01559Q495D7 138 aa8.61□□□□□ -1.03
MATR3-226ENST00000515833 ZFP42Q96MM3 310 aa8.61□□□□□ -1.03
MATR3-226ENST00000515833 BAP1Q92560 729 aa8.59□□□□□ -1.03
MATR3-226ENST00000515833 UNC93B1Q9H1C4 597 aa8.59□□□□□ -1.03
MATR3-226ENST00000515833 TLL2Q9Y6L7 1015 aa8.59□□□□□ -1.03
MATR3-226ENST00000515833 KRI1Q8N9T8 703 aaKnown RBP8.58□□□□□ -1.04
MATR3-226ENST00000515833 EVA1BQ9NVM1 165 aa8.58□□□□□ -1.04
MATR3-226ENST00000515833 PTPRNQ16849 979 aa8.57□□□□□ -1.04
MATR3-226ENST00000515833 KDM2AQ9Y2K7 1162 aa8.57□□□□□ -1.04
MATR3-226ENST00000515833 NDUFV2P19404 249 aa8.56□□□□□ -1.04
MATR3-226ENST00000515833 KCNH2Q12809 1159 aa8.56□□□□□ -1.04
MATR3-226ENST00000515833 TULP1O00294 542 aaPredicted RBP8.55□□□□□ -1.04
MATR3-226ENST00000515833 NNTQ13423 1086 aa8.55□□□□□ -1.04
MATR3-226ENST00000515833 MRPL14Q6P1L8 145 aaKnown RBP8.55□□□□□ -1.04
MATR3-226ENST00000515833 BCANQ96GW7 911 aa8.55□□□□□ -1.04
MATR3-226ENST00000515833 PLEKHG3A1L390 1219 aa8.54□□□□□ -1.04
MATR3-226ENST00000515833 SOBPA7XYQ1 873 aa8.54□□□□□ -1.04
MATR3-226ENST00000515833 VARSP26640 1264 aaKnown RBP8.54□□□□□ -1.04
MATR3-226ENST00000515833 SSTR3P32745 418 aaPredicted RBP8.54□□□□□ -1.04
MATR3-226ENST00000515833 ZNF511Q8NB15 262 aa8.54□□□□□ -1.04
MATR3-226ENST00000515833 PRR7Q8TB68 274 aa8.54□□□□□ -1.04
MATR3-226ENST00000515833 SPIRE2Q8WWL2 714 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms