RNA–Protein interactions for RNA: ENST00000515708.5

TSPAN17-209, Transcript of tetraspanin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN17, Length 2,361 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-209ENST00000515708 LMTK2Q8IWU2 1503 aa21.7■■□□□ 1.06
TSPAN17-209ENST00000515708 MORC1Q86VD1 984 aa21.69■■□□□ 1.06
TSPAN17-209ENST00000515708 KIDINS220Q9ULH0 1771 aa21.68■■□□□ 1.06
TSPAN17-209ENST00000515708 ZC3H13Q5T200 1668 aaKnown RBP21.68■■□□□ 1.06
TSPAN17-209ENST00000515708 RUNDC1Q96C34 613 aa21.67■■□□□ 1.06
TSPAN17-209ENST00000515708 IQSEC2Q5JU85 1478 aa21.67■■□□□ 1.06
TSPAN17-209ENST00000515708 MAPK8IP3Q9UPT6 1336 aa21.67■■□□□ 1.06
TSPAN17-209ENST00000515708 QRICH2Q9H0J4 1663 aa21.66■■□□□ 1.06
TSPAN17-209ENST00000515708 SLC12A5Q9H2X9 1139 aa21.66■■□□□ 1.06
TSPAN17-209ENST00000515708 TRAK1Q9UPV9 953 aa21.66■■□□□ 1.06
TSPAN17-209ENST00000515708 USP19O94966 1318 aa21.66■■□□□ 1.06
TSPAN17-209ENST00000515708 TNNT2P45379 298 aaPredicted RBP21.66■■□□□ 1.06
TSPAN17-209ENST00000515708 NEUROD2Q15784 382 aa21.66■■□□□ 1.06
TSPAN17-209ENST00000515708 PHF23Q9BUL5 403 aaPredicted RBP21.65■■□□□ 1.06
TSPAN17-209ENST00000515708 RRP7AQ9Y3A4 280 aaKnown RBP21.65■■□□□ 1.06
TSPAN17-209ENST00000515708 TCP11L2Q8N4U5 519 aa21.65■■□□□ 1.06
TSPAN17-209ENST00000515708 FRAT1Q92837 279 aaPredicted RBP21.65■■□□□ 1.06
TSPAN17-209ENST00000515708 RARSP54136 660 aaKnown RBP21.64■■□□□ 1.05
TSPAN17-209ENST00000515708 ADGRB1O14514 1584 aa21.64■■□□□ 1.05
TSPAN17-209ENST00000515708 CHGAP10645 457 aaKnown RBP21.63■■□□□ 1.05
TSPAN17-209ENST00000515708 C14orf93Q9H972 538 aaKnown RBP21.63■■□□□ 1.05
TSPAN17-209ENST00000515708 PPLO60437 1756 aa21.63■■□□□ 1.05
TSPAN17-209ENST00000515708 USP32Q8NFA0 1604 aa21.63■■□□□ 1.05
TSPAN17-209ENST00000515708 FRAT2O75474 233 aaPredicted RBP21.61■■□□□ 1.05
TSPAN17-209ENST00000515708 AAMPQ13685 434 aa21.61■■□□□ 1.05
TSPAN17-209ENST00000515708 WDR63Q8IWG1 891 aa21.61■■□□□ 1.05
TSPAN17-209ENST00000515708 ZNF518AQ6AHZ1 1483 aa21.61■■□□□ 1.05
TSPAN17-209ENST00000515708 SEC24BO95487 1268 aa21.6■■□□□ 1.05
TSPAN17-209ENST00000515708 CYB5RLQ6IPT4 315 aa21.6■■□□□ 1.05
TSPAN17-209ENST00000515708 NPATQ14207 1427 aa21.6■■□□□ 1.05
TSPAN17-209ENST00000515708 CD109Q6YHK3 1445 aa21.6■■□□□ 1.05
TSPAN17-209ENST00000515708 MTHFSP49914 203 aa21.59■■□□□ 1.05
TSPAN17-209ENST00000515708 PMFBP1Q8TBY8 1022 aa21.59■■□□□ 1.05
TSPAN17-209ENST00000515708 RTN4Q9NQC3 1192 aaKnown RBP21.59■■□□□ 1.05
TSPAN17-209ENST00000515708 RLBP1P12271 317 aa21.58■■□□□ 1.05
TSPAN17-209ENST00000515708 CCDC27Q2M243 656 aa21.58■■□□□ 1.05
TSPAN17-209ENST00000515708 TMEM132EQ6IEE7 984 aa21.58■■□□□ 1.05
TSPAN17-209ENST00000515708 CFAP65Q6ZU64 1925 aaKnown RBP21.58■■□□□ 1.04
TSPAN17-209ENST00000515708 UBE2Q2Q8WVN8 375 aa21.57■■□□□ 1.04
TSPAN17-209ENST00000515708 NLRP1Q9C000 1473 aa21.57■■□□□ 1.04
TSPAN17-209ENST00000515708 CFAP53Q96M91 514 aa21.56■■□□□ 1.04
TSPAN17-209ENST00000515708 PCDHB15Q9Y5E8 787 aa21.56■■□□□ 1.04
TSPAN17-209ENST00000515708 TNNQ9UQP3 1299 aa21.56■■□□□ 1.04
TSPAN17-209ENST00000515708 BRPF3Q9ULD4 1205 aa21.55■■□□□ 1.04
TSPAN17-209ENST00000515708 BCL2L13Q9BXK5 485 aa21.55■■□□□ 1.04
TSPAN17-209ENST00000515708 ZMYM3Q14202 1370 aa21.54■■□□□ 1.04
TSPAN17-209ENST00000515708 RPGRIP1LQ68CZ1 1315 aa21.54■■□□□ 1.04
TSPAN17-209ENST00000515708 FRMPD1Q5SYB0 1578 aa21.53■■□□□ 1.04
TSPAN17-209ENST00000515708 NCBP3Q53F19 620 aaKnown RBP21.52■■□□□ 1.04
TSPAN17-209ENST00000515708 BECN1Q14457 450 aa21.52■■□□□ 1.04
TSPAN17-209ENST00000515708 MYH16Q9H6N6 1097 aa21.52■■□□□ 1.04
TSPAN17-209ENST00000515708 GLI2P10070 1586 aa21.52■■□□□ 1.03
TSPAN17-209ENST00000515708 PUS7Q96PZ0 661 aaKnown RBP21.51■■□□□ 1.03
TSPAN17-209ENST00000515708 NSD2O96028 1365 aa21.51■■□□□ 1.03
TSPAN17-209ENST00000515708 ANKRD36BQ8N2N9 1353 aa21.51■■□□□ 1.03
TSPAN17-209ENST00000515708 GGT6Q6P531 493 aa21.51■■□□□ 1.03
TSPAN17-209ENST00000515708 TULP4Q9NRJ4 1543 aa21.5■■□□□ 1.03
TSPAN17-209ENST00000515708 PDZRN3Q9UPQ7 1066 aa21.5■■□□□ 1.03
TSPAN17-209ENST00000515708 EVC2Q86UK5 1308 aa21.5■■□□□ 1.03
TSPAN17-209ENST00000515708 HECW2Q9P2P5 1572 aa21.5■■□□□ 1.03
TSPAN17-209ENST00000515708 ARHGEF28Q8N1W1 1705 aaKnown RBP21.49■■□□□ 1.03
TSPAN17-209ENST00000515708 ADGRB2O60241 1585 aa21.49■■□□□ 1.03
TSPAN17-209ENST00000515708 U2AF1L5P0DN76 240 aaPredicted RBP21.48■■□□□ 1.03
TSPAN17-209ENST00000515708 U2AF1Q01081 240 aaKnown RBP eCLIP21.48■■□□□ 1.03
TSPAN17-209ENST00000515708 RWDD1Q9H446 243 aaPredicted RBP21.48■■□□□ 1.03
TSPAN17-209ENST00000515708 POGZQ7Z3K3 1410 aa21.48■■□□□ 1.03
TSPAN17-209ENST00000515708 ABCC3O15438 1527 aa21.47■■□□□ 1.03
TSPAN17-209ENST00000515708 MLH3Q9UHC1 1453 aa21.47■■□□□ 1.03
TSPAN17-209ENST00000515708 MVPQ14764 893 aaKnown RBP21.47■■□□□ 1.03
TSPAN17-209ENST00000515708 UPF2Q9HAU5 1272 aaKnown RBP21.46■■□□□ 1.03
TSPAN17-209ENST00000515708 RAPGEF3O95398 923 aa21.46■■□□□ 1.03
TSPAN17-209ENST00000515708 TBC1D32Q96NH3 1257 aa21.46■■□□□ 1.03
TSPAN17-209ENST00000515708 CAMSAP1Q5T5Y3 1602 aa21.44■■□□□ 1.02
TSPAN17-209ENST00000515708 ZKSCAN2Q63HK3 967 aa21.44■■□□□ 1.02
TSPAN17-209ENST00000515708 SLKQ9H2G2 1235 aaPredicted RBP21.44■■□□□ 1.02
TSPAN17-209ENST00000515708 RIMBP3CA6NJZ7 1639 aa21.44■■□□□ 1.02
TSPAN17-209ENST00000515708 RIMBP3BA6NNM3 1639 aa21.44■■□□□ 1.02
TSPAN17-209ENST00000515708 RIMBP3Q9UFD9 1639 aa21.44■■□□□ 1.02
TSPAN17-209ENST00000515708 SIGLEC1Q9BZZ2 1709 aa21.43■■□□□ 1.02
TSPAN17-209ENST00000515708 NUTM2DQ5VT03 806 aaPredicted RBP21.43■■□□□ 1.02
TSPAN17-209ENST00000515708 NEXMIFQ5QGS0 1516 aa21.43■■□□□ 1.02
TSPAN17-209ENST00000515708 CT47B1P0C2W7 299 aaPredicted RBP21.43■■□□□ 1.02
TSPAN17-209ENST00000515708 CABP2Q9NPB3 220 aa21.43■■□□□ 1.02
TSPAN17-209ENST00000515708 CFAP74Q9C0B2 1584 aa21.43■■□□□ 1.02
TSPAN17-209ENST00000515708 PIK3C2BO00750 1634 aa21.42■■□□□ 1.02
TSPAN17-209ENST00000515708 VGFO15240 615 aaPredicted RBP21.42■■□□□ 1.02
TSPAN17-209ENST00000515708 FTSJ3Q8IY81 847 aaKnown RBP21.42■■□□□ 1.02
TSPAN17-209ENST00000515708 DZIP1LQ8IYY4 767 aaKnown RBP21.42■■□□□ 1.02
TSPAN17-209ENST00000515708 ANTXR1Q9H6X2 564 aa21.42■■□□□ 1.02
TSPAN17-209ENST00000515708 TSR2Q969E8 191 aaKnown RBP21.41■■□□□ 1.02
TSPAN17-209ENST00000515708 ABCC11Q96J66 1382 aa21.41■■□□□ 1.02
TSPAN17-209ENST00000515708 A0A1W2PP64 1363 aa21.39■■□□□ 1.01
TSPAN17-209ENST00000515708 PLEKHF1Q96S99 279 aa21.39■■□□□ 1.01
TSPAN17-209ENST00000515708 TBC1D2Q9BYX2 928 aa21.39■■□□□ 1.01
TSPAN17-209ENST00000515708 SMC4Q9NTJ3 1288 aa21.38■■□□□ 1.01
TSPAN17-209ENST00000515708 POGKQ9P215 609 aa21.38■■□□□ 1.01
TSPAN17-209ENST00000515708 EXOSC9Q06265 439 aaKnown RBP21.37■■□□□ 1.01
TSPAN17-209ENST00000515708 SAFB2Q14151 953 aaKnown RBP eCLIP21.37■■□□□ 1.01
TSPAN17-209ENST00000515708 TMPOP42166 694 aaKnown RBP21.37■■□□□ 1.01
TSPAN17-209ENST00000515708 COL3A1P02461 1466 aaPredicted RBP21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms