RNA–Protein interactions for RNA: ENST00000515675.1

AFP-207, Transcript of alpha fetoprotein, humanhuman

TSL 1 (best)

Gene AFP, Length 317 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-207ENST00000515675 RIC3Q7Z5B4 369 aa8.58□□□□□ -1.04
AFP-207ENST00000515675 IL27Q8NEV9 243 aa8.58□□□□□ -1.04
AFP-207ENST00000515675 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.58□□□□□ -1.04
AFP-207ENST00000515675 LIMD1Q9UGP4 676 aa8.58□□□□□ -1.04
AFP-207ENST00000515675 SPTLC1O15269 473 aa8.57□□□□□ -1.04
AFP-207ENST00000515675 Q3C1V9 767 aa8.57□□□□□ -1.04
AFP-207ENST00000515675 SLC6A16Q9GZN6 736 aa8.57□□□□□ -1.04
AFP-207ENST00000515675 PRDM9Q9NQV7 894 aa8.57□□□□□ -1.04
AFP-207ENST00000515675 RNF223E7ERA6 249 aa8.56□□□□□ -1.04
AFP-207ENST00000515675 DDRGK1Q96HY6 314 aa8.56□□□□□ -1.04
AFP-207ENST00000515675 USB1Q9BQ65 265 aaKnown RBP8.56□□□□□ -1.04
AFP-207ENST00000515675 POLR3EQ9NVU0 708 aa8.56□□□□□ -1.04
AFP-207ENST00000515675 C6orf229H3BNL8 230 aa8.54□□□□□ -1.04
AFP-207ENST00000515675 GJA5P36382 358 aa8.54□□□□□ -1.04
AFP-207ENST00000515675 CSPP1Q1MSJ5 1256 aa8.54□□□□□ -1.04
AFP-207ENST00000515675 QPCTQ16769 361 aa8.53□□□□□ -1.04
AFP-207ENST00000515675 MSS51Q4VC12 460 aa8.53□□□□□ -1.04
AFP-207ENST00000515675 RSPH6AQ9H0K4 717 aa8.53□□□□□ -1.04
AFP-207ENST00000515675 HRCP23327 699 aa8.52□□□□□ -1.05
AFP-207ENST00000515675 GGCXP38435 758 aa8.52□□□□□ -1.05
AFP-207ENST00000515675 CLK2P49760 499 aaKnown RBP8.52□□□□□ -1.05
AFP-207ENST00000515675 FBXO31Q5XUX0 539 aaPredicted RBP8.52□□□□□ -1.05
AFP-207ENST00000515675 RETREG3Q86VR2 466 aa8.52□□□□□ -1.05
AFP-207ENST00000515675 PROCA1Q8NCQ7 364 aaPredicted RBP8.52□□□□□ -1.05
AFP-207ENST00000515675 CABLES1Q8TDN4 633 aa8.52□□□□□ -1.05
AFP-207ENST00000515675 MTMR2Q13614 643 aa8.51□□□□□ -1.05
AFP-207ENST00000515675 SKIV2LQ15477 1246 aaKnown RBP8.51□□□□□ -1.05
AFP-207ENST00000515675 PLA2G2CQ5R387 149 aa8.51□□□□□ -1.05
AFP-207ENST00000515675 EMID1Q96A84 441 aaPredicted RBP8.51□□□□□ -1.05
AFP-207ENST00000515675 MMP16P51512 607 aa8.5□□□□□ -1.05
AFP-207ENST00000515675 SH3D19Q5HYK7 790 aa8.5□□□□□ -1.05
AFP-207ENST00000515675 ANKLE1Q8NAG6 615 aa8.5□□□□□ -1.05
AFP-207ENST00000515675 LILRB3O75022 631 aa8.49□□□□□ -1.05
AFP-207ENST00000515675 TUSC1Q2TAM9 212 aa8.49□□□□□ -1.05
AFP-207ENST00000515675 PRR7Q8TB68 274 aa8.49□□□□□ -1.05
AFP-207ENST00000515675 FCF1Q9Y324 198 aaKnown RBP8.49□□□□□ -1.05
AFP-207ENST00000515675 CFAP99D6REC4 459 aa8.48□□□□□ -1.05
AFP-207ENST00000515675 DXOO77932 396 aaKnown RBP8.48□□□□□ -1.05
AFP-207ENST00000515675 RTL5Q5HYW3 569 aaPredicted RBP8.48□□□□□ -1.05
AFP-207ENST00000515675 PRPF38BQ5VTL8 546 aaKnown RBP8.48□□□□□ -1.05
AFP-207ENST00000515675 PRKD2Q9BZL6 878 aa8.48□□□□□ -1.05
AFP-207ENST00000515675 ZBTB3Q9H5J0 574 aa8.48□□□□□ -1.05
AFP-207ENST00000515675 LIAT1Q6ZQX7 453 aa8.47□□□□□ -1.05
AFP-207ENST00000515675 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.47□□□□□ -1.05
AFP-207ENST00000515675 SPDYE5A6NIY4 337 aa8.46□□□□□ -1.06
AFP-207ENST00000515675 NUTM2BA6NNL0 878 aaPredicted RBP8.46□□□□□ -1.06
AFP-207ENST00000515675 NUTM2EB1AL46 878 aaPredicted RBP8.46□□□□□ -1.06
AFP-207ENST00000515675 RGS20O76081 388 aa8.46□□□□□ -1.06
AFP-207ENST00000515675 JUNDP17535 347 aa8.46□□□□□ -1.06
AFP-207ENST00000515675 NUTM2DQ5VT03 806 aaPredicted RBP8.46□□□□□ -1.06
AFP-207ENST00000515675 NUTM2AQ8IVF1 878 aaPredicted RBP8.46□□□□□ -1.06
AFP-207ENST00000515675 ATP1B4Q9UN42 357 aaPredicted RBP8.45□□□□□ -1.06
AFP-207ENST00000515675 GOPCQ9HD26 462 aa8.44□□□□□ -1.06
AFP-207ENST00000515675 SLC19A1P41440 591 aa8.43□□□□□ -1.06
AFP-207ENST00000515675 DESI1Q6ICB0 168 aa8.42□□□□□ -1.06
AFP-207ENST00000515675 CCDC24Q8N4L8 307 aa8.42□□□□□ -1.06
AFP-207ENST00000515675 V9GY48 417 aaPredicted RBP8.42□□□□□ -1.06
AFP-207ENST00000515675 PER1O15534 1290 aaPredicted RBP8.41□□□□□ -1.06
AFP-207ENST00000515675 PPP2R2DQ66LE6 453 aa8.41□□□□□ -1.06
AFP-207ENST00000515675 PTCRAQ6ISU1 281 aaPredicted RBP8.41□□□□□ -1.06
AFP-207ENST00000515675 LYPD8Q6UX82 237 aa8.41□□□□□ -1.06
AFP-207ENST00000515675 TSC1Q92574 1164 aa8.41□□□□□ -1.06
AFP-207ENST00000515675 PCMTD1Q96MG8 357 aaPredicted RBP8.41□□□□□ -1.06
AFP-207ENST00000515675 NUDT12Q9BQG2 462 aa8.41□□□□□ -1.06
AFP-207ENST00000515675 SPRYD7Q5W111 196 aa8.4□□□□□ -1.06
AFP-207ENST00000515675 CTDSPL2Q05D32 466 aa8.39□□□□□ -1.07
AFP-207ENST00000515675 PTPRNQ16849 979 aa8.39□□□□□ -1.07
AFP-207ENST00000515675 EVA1BQ9NVM1 165 aa8.39□□□□□ -1.07
AFP-207ENST00000515675 CCNYL3P0C7X3 344 aa8.38□□□□□ -1.07
AFP-207ENST00000515675 RPIAP49247 311 aa8.37□□□□□ -1.07
AFP-207ENST00000515675 ZBTB24O43167 697 aaPredicted RBP8.36□□□□□ -1.07
AFP-207ENST00000515675 RFC5P40937 340 aa8.36□□□□□ -1.07
AFP-207ENST00000515675 KCNH2Q12809 1159 aa8.36□□□□□ -1.07
AFP-207ENST00000515675 ZNF598Q86UK7 904 aaKnown RBP8.36□□□□□ -1.07
AFP-207ENST00000515675 AP1G2O75843 785 aa8.35□□□□□ -1.07
AFP-207ENST00000515675 CD2BP2O95400 341 aaKnown RBP8.35□□□□□ -1.07
AFP-207ENST00000515675 F12P00748 615 aaPredicted RBP8.35□□□□□ -1.07
AFP-207ENST00000515675 ZNF697Q5TEC3 545 aa8.35□□□□□ -1.07
AFP-207ENST00000515675 MAP10Q9P2G4 905 aa8.35□□□□□ -1.07
AFP-207ENST00000515675 TRIM32Q13049 653 aa8.34□□□□□ -1.07
AFP-207ENST00000515675 TRIM67Q6ZTA4 783 aa8.34□□□□□ -1.07
AFP-207ENST00000515675 HELBQ8NG08 1087 aaPredicted RBP8.34□□□□□ -1.07
AFP-207ENST00000515675 LRRN4Q8WUT4 740 aa8.34□□□□□ -1.07
AFP-207ENST00000515675 CTHP32929 405 aa8.33□□□□□ -1.08
AFP-207ENST00000515675 UNC93B1Q9H1C4 597 aa8.33□□□□□ -1.08
AFP-207ENST00000515675 SKOR1P84550 965 aa8.32□□□□□ -1.08
AFP-207ENST00000515675 PKD2L1Q9P0L9 805 aa8.32□□□□□ -1.08
AFP-207ENST00000515675 GDF9O60383 454 aa8.31□□□□□ -1.08
AFP-207ENST00000515675 BAP1Q92560 729 aa8.31□□□□□ -1.08
AFP-207ENST00000515675 FOXC1Q12948 553 aa8.3□□□□□ -1.08
AFP-207ENST00000515675 TNFRSF10AO00220 468 aa8.29□□□□□ -1.08
AFP-207ENST00000515675 GFRA3O60609 400 aa8.29□□□□□ -1.08
AFP-207ENST00000515675 USP17L8P0C7I0 530 aa8.29□□□□□ -1.08
AFP-207ENST00000515675 SH3BP2P78314 561 aa8.29□□□□□ -1.08
AFP-207ENST00000515675 LINC01559Q495D7 138 aa8.29□□□□□ -1.08
AFP-207ENST00000515675 EPS8L1Q8TE68 723 aa8.29□□□□□ -1.08
AFP-207ENST00000515675 IRX2Q9BZI1 471 aaPredicted RBP8.29□□□□□ -1.08
AFP-207ENST00000515675 HMX1Q9NP08 348 aaPredicted RBP8.29□□□□□ -1.08
AFP-207ENST00000515675 PDZRN3Q9UPQ7 1066 aa8.29□□□□□ -1.08
AFP-207ENST00000515675 NR6A1Q15406 480 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms