RNA–Protein interactions for RNA: ENST00000515627.2

LINC01843-201, Transcript of long intergenic non-protein coding RNA 1843, humanhuman

TSL 1 (best) BASIC

Gene LINC01843, Length 1,107 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01843-201ENST00000515627 SOS2Q07890 1332 aaPredicted RBP15.17■□□□□ 0.02
LINC01843-201ENST00000515627 LRPPRCP42704 1394 aaKnown RBP15.17■□□□□ 0.02
LINC01843-201ENST00000515627 KNDC1Q76NI1 1749 aa15.17■□□□□ 0.02
LINC01843-201ENST00000515627 PLEKHH1Q9ULM0 1364 aa15.16■□□□□ 0.02
LINC01843-201ENST00000515627 TMEM132EQ6IEE7 984 aa15.16■□□□□ 0.02
LINC01843-201ENST00000515627 WAPLQ7Z5K2 1190 aa15.16■□□□□ 0.02
LINC01843-201ENST00000515627 NRXN1Q9ULB1 1477 aa15.15■□□□□ 0.02
LINC01843-201ENST00000515627 ABCC11Q96J66 1382 aa15.15■□□□□ 0.02
LINC01843-201ENST00000515627 RAB3GAP2Q9H2M9 1393 aa15.15■□□□□ 0.02
LINC01843-201ENST00000515627 STK26Q9P289 416 aa15.15■□□□□ 0.02
LINC01843-201ENST00000515627 AFF2P51816 1311 aa15.15■□□□□ 0.02
LINC01843-201ENST00000515627 YTHDC2Q9H6S0 1430 aaKnown RBP15.13■□□□□ 0.01
LINC01843-201ENST00000515627 MYOM2P54296 1465 aa15.13■□□□□ 0.01
LINC01843-201ENST00000515627 PXDNQ92626 1479 aa15.12■□□□□ 0.01
LINC01843-201ENST00000515627 COL22A1Q8NFW1 1626 aaPredicted RBP15.11■□□□□ 0.01
LINC01843-201ENST00000515627 RXRBP28702 533 aa15.11■□□□□ 0.01
LINC01843-201ENST00000515627 ESCO1Q5FWF5 840 aa15.11■□□□□ 0.01
LINC01843-201ENST00000515627 C8orf37Q96NL8 207 aa15.11■□□□□ 0.01
LINC01843-201ENST00000515627 C14orf93Q9H972 538 aaKnown RBP15.11■□□□□ 0.01
LINC01843-201ENST00000515627 ACIN1Q9UKV3 1341 aaKnown RBP15.11■□□□□ 0.01
LINC01843-201ENST00000515627 CDK12Q9NYV4 1490 aaPredicted RBP15.1■□□□□ 0.01
LINC01843-201ENST00000515627 FMN2Q9NZ56 1722 aa15.1■□□□□ 0.01
LINC01843-201ENST00000515627 ADAMTS2O95450 1211 aa15.1■□□□□ 0.01
LINC01843-201ENST00000515627 NUTM2FA1L443 756 aa15.09■□□□□ 0.01
LINC01843-201ENST00000515627 CFAP70Q5T0N1 1121 aa15.09■□□□□ 0.01
LINC01843-201ENST00000515627 POTEDQ86YR6 584 aa15.09■□□□□ 0.01
LINC01843-201ENST00000515627 FOXO3O43524 673 aa15.08■□□□□ 0
LINC01843-201ENST00000515627 XPCQ01831 940 aaPredicted RBP15.08■□□□□ 0
LINC01843-201ENST00000515627 NPHP3Q7Z494 1330 aa15.08■□□□□ 0
LINC01843-201ENST00000515627 UPF1Q92900 1129 aaKnown RBP eCLIP15.07■□□□□ 0
LINC01843-201ENST00000515627 SIRT1Q96EB6 747 aa15.07■□□□□ 0
LINC01843-201ENST00000515627 RGS12O14924 1447 aa15.07■□□□□ 0
LINC01843-201ENST00000515627 NGLY1Q96IV0 654 aa15.06■□□□□ 0
LINC01843-201ENST00000515627 QTRT2Q9H974 415 aaKnown RBP15.06■□□□□ 0
LINC01843-201ENST00000515627 ADGRB1O14514 1584 aa15.06■□□□□ 0
LINC01843-201ENST00000515627 RGPD8O14715 1765 aaPredicted RBP15.04■□□□□ -0
LINC01843-201ENST00000515627 DHX57Q6P158 1386 aaKnown RBP15.04■□□□□ -0
LINC01843-201ENST00000515627 RBM6P78332 1123 aaKnown RBP15.04■□□□□ -0
LINC01843-201ENST00000515627 KIF1AQ12756 1690 aa15.03■□□□□ -0
LINC01843-201ENST00000515627 DLC1Q96QB1 1528 aa15.03■□□□□ -0
LINC01843-201ENST00000515627 FNBP4Q8N3X1 1017 aaPredicted RBP15.03■□□□□ -0
LINC01843-201ENST00000515627 PRAM1Q96QH2 718 aa15.02■□□□□ -0
LINC01843-201ENST00000515627 USP21Q9UK80 565 aa15.02■□□□□ -0
LINC01843-201ENST00000515627 MARF1Q9Y4F3 1742 aaKnown RBP15.02□□□□□ -0.01
LINC01843-201ENST00000515627 SAFB2Q14151 953 aaKnown RBP eCLIP15.01□□□□□ -0.01
LINC01843-201ENST00000515627 USP32Q8NFA0 1604 aa15.01□□□□□ -0.01
LINC01843-201ENST00000515627 BCL9LQ86UU0 1499 aa15.01□□□□□ -0.01
LINC01843-201ENST00000515627 ATRNO75882 1429 aa15□□□□□ -0.01
LINC01843-201ENST00000515627 SPATA31A3Q5VYP0 1347 aa15□□□□□ -0.01
LINC01843-201ENST00000515627 ADGRB2O60241 1585 aa15□□□□□ -0.01
LINC01843-201ENST00000515627 HRCP23327 699 aa14.99□□□□□ -0.01
LINC01843-201ENST00000515627 KRT28Q7Z3Y7 464 aa14.98□□□□□ -0.01
LINC01843-201ENST00000515627 DCAF11Q8TEB1 546 aa14.98□□□□□ -0.01
LINC01843-201ENST00000515627 TRPC5Q9UL62 973 aaPredicted RBP14.98□□□□□ -0.01
LINC01843-201ENST00000515627 PHF8Q9UPP1 1060 aa14.98□□□□□ -0.01
LINC01843-201ENST00000515627 KDM2AQ9Y2K7 1162 aa14.98□□□□□ -0.01
LINC01843-201ENST00000515627 TNS3Q68CZ2 1445 aa14.96□□□□□ -0.01
LINC01843-201ENST00000515627 ANKARQ7Z5J8 1434 aa14.96□□□□□ -0.01
LINC01843-201ENST00000515627 POGKQ9P215 609 aa14.96□□□□□ -0.01
LINC01843-201ENST00000515627 TRAK1Q9UPV9 953 aa14.96□□□□□ -0.01
LINC01843-201ENST00000515627 SLIT2O94813 1529 aa14.95□□□□□ -0.02
LINC01843-201ENST00000515627 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.95□□□□□ -0.02
LINC01843-201ENST00000515627 PRR36Q9H6K5 1346 aa14.94□□□□□ -0.02
LINC01843-201ENST00000515627 HIRIP3Q9BW71 556 aaPredicted RBP14.94□□□□□ -0.02
LINC01843-201ENST00000515627 ABCA3Q99758 1704 aa14.94□□□□□ -0.02
LINC01843-201ENST00000515627 PMFBP1Q8TBY8 1022 aa14.93□□□□□ -0.02
LINC01843-201ENST00000515627 CABLES1Q8TDN4 633 aa14.93□□□□□ -0.02
LINC01843-201ENST00000515627 SBNO1A3KN83 1393 aa14.93□□□□□ -0.02
LINC01843-201ENST00000515627 MINK1Q8N4C8 1332 aaPredicted RBP14.92□□□□□ -0.02
LINC01843-201ENST00000515627 ARHGEF28Q8N1W1 1705 aaKnown RBP14.92□□□□□ -0.02
LINC01843-201ENST00000515627 TRPM3Q9HCF6 1732 aaPredicted RBP14.92□□□□□ -0.02
LINC01843-201ENST00000515627 GLI3P10071 1580 aa14.92□□□□□ -0.02
LINC01843-201ENST00000515627 TULP4Q9NRJ4 1543 aa14.92□□□□□ -0.02
LINC01843-201ENST00000515627 PSME1Q06323 249 aa14.91□□□□□ -0.02
LINC01843-201ENST00000515627 GJD4Q96KN9 370 aaPredicted RBP14.91□□□□□ -0.02
LINC01843-201ENST00000515627 STAC3Q96MF2 364 aa14.91□□□□□ -0.02
LINC01843-201ENST00000515627 ATAD2Q6PL18 1390 aa14.9□□□□□ -0.02
LINC01843-201ENST00000515627 UNC5CLQ8IV45 518 aa14.9□□□□□ -0.02
LINC01843-201ENST00000515627 RALGAPBQ86X10 1494 aa14.89□□□□□ -0.03
LINC01843-201ENST00000515627 WASLO00401 505 aaPredicted RBP14.89□□□□□ -0.03
LINC01843-201ENST00000515627 PLEKHG5O94827 1062 aa14.89□□□□□ -0.03
LINC01843-201ENST00000515627 PLCH1Q4KWH8 1693 aa14.89□□□□□ -0.03
LINC01843-201ENST00000515627 ALS2Q96Q42 1657 aa14.89□□□□□ -0.03
LINC01843-201ENST00000515627 ARHGEF10O15013 1369 aa14.88□□□□□ -0.03
LINC01843-201ENST00000515627 LMOD2Q6P5Q4 547 aa14.87□□□□□ -0.03
LINC01843-201ENST00000515627 ATP7BP35670 1465 aa14.87□□□□□ -0.03
LINC01843-201ENST00000515627 EIF3AQ14152 1382 aaKnown RBP14.86□□□□□ -0.03
LINC01843-201ENST00000515627 NWD2Q9ULI1 1742 aa14.86□□□□□ -0.03
LINC01843-201ENST00000515627 KIAA1210Q9ULL0 1709 aa14.86□□□□□ -0.03
LINC01843-201ENST00000515627 CRYBG1Q9Y4K1 1723 aa14.86□□□□□ -0.03
LINC01843-201ENST00000515627 FAM83GA6ND36 823 aa14.85□□□□□ -0.03
LINC01843-201ENST00000515627 HAP1P54257 671 aaPredicted RBP14.85□□□□□ -0.03
LINC01843-201ENST00000515627 VPS72Q15906 364 aa14.84□□□□□ -0.03
LINC01843-201ENST00000515627 BRWD3Q6RI45 1802 aa14.84□□□□□ -0.03
LINC01843-201ENST00000515627 GPRASP1Q5JY77 1395 aa14.84□□□□□ -0.03
LINC01843-201ENST00000515627 NRAPQ86VF7 1730 aa14.83□□□□□ -0.03
LINC01843-201ENST00000515627 NBPF1Q3BBV0 1214 aa14.83□□□□□ -0.04
LINC01843-201ENST00000515627 EP400Q96L91 3159 aa14.83□□□□□ -0.04
LINC01843-201ENST00000515627 TOPAZ1Q8N9V7 1692 aa14.82□□□□□ -0.04
LINC01843-201ENST00000515627 NUDT16Q96DE0 195 aaKnown RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms