RNA–Protein interactions for RNA: ENST00000515550.1

N4BP2-204, Transcript of NEDD4 binding protein 2, humanhuman

TSL 3

Gene N4BP2, Length 724 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
N4BP2-204ENST00000515550 STK17AQ9UEE5 414 aa11.7□□□□□ -0.54
N4BP2-204ENST00000515550 INSM1Q01101 510 aaPredicted RBP11.69□□□□□ -0.54
N4BP2-204ENST00000515550 BRICD5Q6PL45 260 aa11.69□□□□□ -0.54
N4BP2-204ENST00000515550 PRDM9Q9NQV7 894 aa11.69□□□□□ -0.54
N4BP2-204ENST00000515550 NACADO15069 1562 aa11.68□□□□□ -0.54
N4BP2-204ENST00000515550 WNT7AO00755 349 aa11.68□□□□□ -0.54
N4BP2-204ENST00000515550 WIPF1O43516 503 aa11.68□□□□□ -0.54
N4BP2-204ENST00000515550 NFX1Q12986 1120 aaKnown RBP11.68□□□□□ -0.54
N4BP2-204ENST00000515550 SNIP1Q8TAD8 396 aaKnown RBP11.67□□□□□ -0.54
N4BP2-204ENST00000515550 BICRAQ9NZM4 1560 aa11.66□□□□□ -0.54
N4BP2-204ENST00000515550 RBM26Q5T8P6 1007 aaKnown RBP11.65□□□□□ -0.54
N4BP2-204ENST00000515550 TESPA1A2RU30 521 aaPredicted RBP11.64□□□□□ -0.55
N4BP2-204ENST00000515550 FECHP22830 423 aa11.64□□□□□ -0.55
N4BP2-204ENST00000515550 TRIM32Q13049 653 aa11.64□□□□□ -0.55
N4BP2-204ENST00000515550 Q3C1V9 767 aa11.64□□□□□ -0.55
N4BP2-204ENST00000515550 SENP2Q9HC62 589 aa11.64□□□□□ -0.55
N4BP2-204ENST00000515550 CUX2O14529 1486 aa11.63□□□□□ -0.55
N4BP2-204ENST00000515550 REPIN1Q9BWE0 567 aaKnown RBP11.63□□□□□ -0.55
N4BP2-204ENST00000515550 ATP13A2Q9NQ11 1180 aa11.63□□□□□ -0.55
N4BP2-204ENST00000515550 SMPD1P17405 629 aa11.62□□□□□ -0.55
N4BP2-204ENST00000515550 RNF19BQ6ZMZ0 732 aa11.62□□□□□ -0.55
N4BP2-204ENST00000515550 GPR37O15354 613 aa11.61□□□□□ -0.55
N4BP2-204ENST00000515550 MMP16P51512 607 aa11.6□□□□□ -0.55
N4BP2-204ENST00000515550 NLRP7Q8WX94 980 aa11.6□□□□□ -0.55
N4BP2-204ENST00000515550 TRIM47Q96LD4 638 aa11.6□□□□□ -0.55
N4BP2-204ENST00000515550 UNC13AQ9UPW8 1703 aa11.6□□□□□ -0.55
N4BP2-204ENST00000515550 MRGPRX2Q96LB1 330 aa11.59□□□□□ -0.55
N4BP2-204ENST00000515550 KIFC2Q96AC6 838 aa11.58□□□□□ -0.56
N4BP2-204ENST00000515550 TERTO14746 1132 aaKnown RBP11.57□□□□□ -0.56
N4BP2-204ENST00000515550 J3QL48 77 aa11.55□□□□□ -0.56
N4BP2-204ENST00000515550 SNRPBP14678 240 aaKnown RBP11.55□□□□□ -0.56
N4BP2-204ENST00000515550 PHOX2BQ99453 314 aa11.55□□□□□ -0.56
N4BP2-204ENST00000515550 DXOO77932 396 aaKnown RBP11.54□□□□□ -0.56
N4BP2-204ENST00000515550 USB1Q9BQ65 265 aaKnown RBP11.54□□□□□ -0.56
N4BP2-204ENST00000515550 WNT7BP56706 349 aa11.51□□□□□ -0.57
N4BP2-204ENST00000515550 HPS1Q92902 700 aa11.51□□□□□ -0.57
N4BP2-204ENST00000515550 CD46P15529 392 aa11.5□□□□□ -0.57
N4BP2-204ENST00000515550 KDM4AO75164 1064 aa11.49□□□□□ -0.57
N4BP2-204ENST00000515550 GPIHBP1Q8IV16 184 aa11.49□□□□□ -0.57
N4BP2-204ENST00000515550 EIF4G1Q04637 1599 aaKnown RBP11.49□□□□□ -0.57
N4BP2-204ENST00000515550 FAM181BA6NEQ2 426 aa11.48□□□□□ -0.57
N4BP2-204ENST00000515550 USP46P62068 366 aa11.48□□□□□ -0.57
N4BP2-204ENST00000515550 RC3H1Q5TC82 1133 aaKnown RBP11.48□□□□□ -0.57
N4BP2-204ENST00000515550 SLC16A10Q8TF71 515 aa11.48□□□□□ -0.57
N4BP2-204ENST00000515550 LCE2CQ5TA81 110 aa11.47□□□□□ -0.57
N4BP2-204ENST00000515550 CCDC24Q8N4L8 307 aa11.47□□□□□ -0.57
N4BP2-204ENST00000515550 SKOR1P84550 965 aa11.43□□□□□ -0.58
N4BP2-204ENST00000515550 ERCC6Q03468 1493 aa11.43□□□□□ -0.58
N4BP2-204ENST00000515550 ALDH1A1P00352 501 aa11.42□□□□□ -0.58
N4BP2-204ENST00000515550 NPAS3Q8IXF0 933 aa11.41□□□□□ -0.58
N4BP2-204ENST00000515550 NXF1Q9UBU9 619 aaKnown RBP11.41□□□□□ -0.58
N4BP2-204ENST00000515550 JUNDP17535 347 aa11.4□□□□□ -0.58
N4BP2-204ENST00000515550 MAP2K5Q13163 448 aa11.4□□□□□ -0.58
N4BP2-204ENST00000515550 SHROOM4Q9ULL8 1493 aa11.39□□□□□ -0.59
N4BP2-204ENST00000515550 HOXA2O43364 376 aa11.39□□□□□ -0.59
N4BP2-204ENST00000515550 IRF7Q92985 503 aa11.38□□□□□ -0.59
N4BP2-204ENST00000515550 EHBP1Q8NDI1 1231 aa11.37□□□□□ -0.59
N4BP2-204ENST00000515550 HLA-CQ95604 372 aa11.36□□□□□ -0.59
N4BP2-204ENST00000515550 WASF2Q9Y6W5 498 aa11.36□□□□□ -0.59
N4BP2-204ENST00000515550 CAPN5O15484 640 aaPredicted RBP11.35□□□□□ -0.59
N4BP2-204ENST00000515550 NUDT12Q9BQG2 462 aa11.35□□□□□ -0.59
N4BP2-204ENST00000515550 SIAH2O43255 324 aa11.34□□□□□ -0.59
N4BP2-204ENST00000515550 MDM2Q00987 491 aaPredicted RBP11.34□□□□□ -0.59
N4BP2-204ENST00000515550 RETREG3Q86VR2 466 aa11.34□□□□□ -0.59
N4BP2-204ENST00000515550 ZSCAN1Q8NBB4 408 aa11.34□□□□□ -0.59
N4BP2-204ENST00000515550 IRF6O14896 467 aa11.32□□□□□ -0.6
N4BP2-204ENST00000515550 BMP1P13497 986 aa11.32□□□□□ -0.6
N4BP2-204ENST00000515550 GMPRP36959 345 aa11.32□□□□□ -0.6
N4BP2-204ENST00000515550 TRIM46Q7Z4K8 759 aa11.32□□□□□ -0.6
N4BP2-204ENST00000515550 GUCA2AQ02747 115 aa11.3□□□□□ -0.6
N4BP2-204ENST00000515550 H3BM21 787 aa11.29□□□□□ -0.6
N4BP2-204ENST00000515550 MINK1Q8N4C8 1332 aaPredicted RBP11.29□□□□□ -0.6
N4BP2-204ENST00000515550 TULP1O00294 542 aaPredicted RBP11.28□□□□□ -0.6
N4BP2-204ENST00000515550 NUTM1Q86Y26 1132 aa11.28□□□□□ -0.6
N4BP2-204ENST00000515550 CCNYL3P0C7X3 344 aa11.27□□□□□ -0.61
N4BP2-204ENST00000515550 CLCN1P35523 988 aa11.27□□□□□ -0.61
N4BP2-204ENST00000515550 PTCRAQ6ISU1 281 aaPredicted RBP11.27□□□□□ -0.61
N4BP2-204ENST00000515550 SYMPKQ92797 1274 aaKnown RBP11.27□□□□□ -0.61
N4BP2-204ENST00000515550 GPCPD1Q9NPB8 672 aa11.27□□□□□ -0.61
N4BP2-204ENST00000515550 MS4A1P11836 297 aa11.26□□□□□ -0.61
N4BP2-204ENST00000515550 SH3BP2P78314 561 aa11.25□□□□□ -0.61
N4BP2-204ENST00000515550 FAM217BQ9NTX9 383 aaPredicted RBP11.25□□□□□ -0.61
N4BP2-204ENST00000515550 PLEKHG3A1L390 1219 aa11.24□□□□□ -0.61
N4BP2-204ENST00000515550 LORP23490 312 aaPredicted RBP11.24□□□□□ -0.61
N4BP2-204ENST00000515550 FDX1P10109 184 aa11.23□□□□□ -0.61
N4BP2-204ENST00000515550 VEGFBP49765 207 aa11.23□□□□□ -0.61
N4BP2-204ENST00000515550 PTPRNQ16849 979 aa11.23□□□□□ -0.61
N4BP2-204ENST00000515550 ZFP42Q96MM3 310 aa11.23□□□□□ -0.61
N4BP2-204ENST00000515550 C6orf229H3BNL8 230 aa11.22□□□□□ -0.61
N4BP2-204ENST00000515550 PLCB2Q00722 1185 aa11.22□□□□□ -0.61
N4BP2-204ENST00000515550 CCDC102AQ96A19 550 aa11.22□□□□□ -0.61
N4BP2-204ENST00000515550 MPNDQ8N594 471 aa11.21□□□□□ -0.61
N4BP2-204ENST00000515550 KRI1Q8N9T8 703 aaKnown RBP11.21□□□□□ -0.61
N4BP2-204ENST00000515550 UNC93B1Q9H1C4 597 aa11.21□□□□□ -0.61
N4BP2-204ENST00000515550 ERBB4Q15303 1308 aa11.2□□□□□ -0.62
N4BP2-204ENST00000515550 SCARF1Q14162 830 aa11.2□□□□□ -0.62
N4BP2-204ENST00000515550 VARSP26640 1264 aaKnown RBP11.19□□□□□ -0.62
N4BP2-204ENST00000515550 EVA1BQ9NVM1 165 aa11.19□□□□□ -0.62
N4BP2-204ENST00000515550 TLL2Q9Y6L7 1015 aa11.19□□□□□ -0.62
N4BP2-204ENST00000515550 NNTQ13423 1086 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms