RNA–Protein interactions for RNA: ENST00000515533.1

CDC42SE2-212, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-212ENST00000515533 PTPN23Q9H3S7 1636 aa13.98□□□□□ -0.17
CDC42SE2-212ENST00000515533 VWDEQ8N2E2 1590 aa13.98□□□□□ -0.17
CDC42SE2-212ENST00000515533 ERVK-7P63135 1459 aa13.98□□□□□ -0.17
CDC42SE2-212ENST00000515533 NPHP4O75161 1426 aaPredicted RBP13.98□□□□□ -0.17
CDC42SE2-212ENST00000515533 SOCS7O14512 581 aa13.97□□□□□ -0.17
CDC42SE2-212ENST00000515533 TOM1O60784 492 aa13.97□□□□□ -0.17
CDC42SE2-212ENST00000515533 STRCP1A6NGW2 1772 aa13.96□□□□□ -0.17
CDC42SE2-212ENST00000515533 PRDM15P57071 1507 aaPredicted RBP13.96□□□□□ -0.17
CDC42SE2-212ENST00000515533 POTEB3A0JP26 581 aa13.96□□□□□ -0.17
CDC42SE2-212ENST00000515533 POTEBQ6S5H4 581 aa13.96□□□□□ -0.17
CDC42SE2-212ENST00000515533 SYNMO15061 1565 aa13.96□□□□□ -0.18
CDC42SE2-212ENST00000515533 HS3ST6Q96QI5 342 aa13.95□□□□□ -0.18
CDC42SE2-212ENST00000515533 PIP4K2BP78356 416 aa13.94□□□□□ -0.18
CDC42SE2-212ENST00000515533 ERBINQ96RT1 1412 aa13.94□□□□□ -0.18
CDC42SE2-212ENST00000515533 BOLA1Q9Y3E2 137 aa13.94□□□□□ -0.18
CDC42SE2-212ENST00000515533 KIF15Q9NS87 1388 aa13.94□□□□□ -0.18
CDC42SE2-212ENST00000515533 FAM205CA6NFA0 338 aa13.93□□□□□ -0.18
CDC42SE2-212ENST00000515533 AMER1Q5JTC6 1135 aaPredicted RBP13.93□□□□□ -0.18
CDC42SE2-212ENST00000515533 KRTAP3-3Q9BYR6 98 aa13.92□□□□□ -0.18
CDC42SE2-212ENST00000515533 KRTAP3-2Q9BYR7 98 aa13.92□□□□□ -0.18
CDC42SE2-212ENST00000515533 PIK3C2BO00750 1634 aa13.91□□□□□ -0.18
CDC42SE2-212ENST00000515533 G3V3G9 751 aa13.91□□□□□ -0.18
CDC42SE2-212ENST00000515533 ABCC5O15440 1437 aa13.9□□□□□ -0.18
CDC42SE2-212ENST00000515533 DAPK1P53355 1430 aa13.9□□□□□ -0.18
CDC42SE2-212ENST00000515533 HSPA1LP34931 641 aa13.9□□□□□ -0.18
CDC42SE2-212ENST00000515533 RRP7BPQ9NSQ0 103 aa13.9□□□□□ -0.18
CDC42SE2-212ENST00000515533 SCAF11Q99590 1463 aaKnown RBP13.9□□□□□ -0.18
CDC42SE2-212ENST00000515533 MED1Q15648 1581 aaPredicted RBP13.9□□□□□ -0.18
CDC42SE2-212ENST00000515533 KDM5AP29375 1690 aaKnown RBP13.9□□□□□ -0.18
CDC42SE2-212ENST00000515533 ARHGAP31Q2M1Z3 1444 aa13.9□□□□□ -0.19
CDC42SE2-212ENST00000515533 KANK1Q14678 1352 aa13.89□□□□□ -0.19
CDC42SE2-212ENST00000515533 XIRP1Q702N8 1843 aaKnown RBP13.89□□□□□ -0.19
CDC42SE2-212ENST00000515533 FGD6Q6ZV73 1430 aa13.89□□□□□ -0.19
CDC42SE2-212ENST00000515533 HOXB3P14651 431 aaPredicted RBP13.88□□□□□ -0.19
CDC42SE2-212ENST00000515533 SLIT1O75093 1534 aa13.88□□□□□ -0.19
CDC42SE2-212ENST00000515533 LRRC7Q96NW7 1537 aa13.88□□□□□ -0.19
CDC42SE2-212ENST00000515533 ALKQ9UM73 1620 aa13.87□□□□□ -0.19
CDC42SE2-212ENST00000515533 ARHGAP23Q9P227 1491 aa13.87□□□□□ -0.19
CDC42SE2-212ENST00000515533 ANKRD30AQ9BXX3 1397 aa13.86□□□□□ -0.19
CDC42SE2-212ENST00000515533 TXNDC2Q86VQ3 553 aa13.85□□□□□ -0.19
CDC42SE2-212ENST00000515533 EID1Q9Y6B2 187 aa13.85□□□□□ -0.19
CDC42SE2-212ENST00000515533 MYO5BQ9ULV0 1848 aa13.85□□□□□ -0.19
CDC42SE2-212ENST00000515533 EFCAB6Q5THR3 1501 aa13.84□□□□□ -0.19
CDC42SE2-212ENST00000515533 LMTK2Q8IWU2 1503 aa13.84□□□□□ -0.19
CDC42SE2-212ENST00000515533 CHIC2Q9UKJ5 165 aa13.83□□□□□ -0.2
CDC42SE2-212ENST00000515533 LTKP29376 864 aa13.82□□□□□ -0.2
CDC42SE2-212ENST00000515533 TMEM2Q9UHN6 1383 aa13.81□□□□□ -0.2
CDC42SE2-212ENST00000515533 GCC2Q8IWJ2 1684 aa13.8□□□□□ -0.2
CDC42SE2-212ENST00000515533 EFCAB3Q8N7B9 438 aa13.8□□□□□ -0.2
CDC42SE2-212ENST00000515533 ADGRL2O95490 1459 aa13.8□□□□□ -0.2
CDC42SE2-212ENST00000515533 ADGRB3O60242 1522 aa13.8□□□□□ -0.2
CDC42SE2-212ENST00000515533 HOXB1P14653 301 aaPredicted RBP13.79□□□□□ -0.2
CDC42SE2-212ENST00000515533 ZNF710Q8N1W2 664 aa13.79□□□□□ -0.2
CDC42SE2-212ENST00000515533 TET3O43151 1660 aa13.79□□□□□ -0.2
CDC42SE2-212ENST00000515533 IDI1Q13907 227 aa13.77□□□□□ -0.21
CDC42SE2-212ENST00000515533 FAM50AQ14320 339 aaKnown RBP13.77□□□□□ -0.21
CDC42SE2-212ENST00000515533 DOK7Q18PE1 504 aa13.77□□□□□ -0.21
CDC42SE2-212ENST00000515533 RPRD2Q5VT52 1461 aaKnown RBP13.76□□□□□ -0.21
CDC42SE2-212ENST00000515533 NOS1P29475 1434 aa13.76□□□□□ -0.21
CDC42SE2-212ENST00000515533 ANKRD50Q9ULJ7 1429 aa13.75□□□□□ -0.21
CDC42SE2-212ENST00000515533 CHD2O14647 1828 aaKnown RBP13.75□□□□□ -0.21
CDC42SE2-212ENST00000515533 SLC52A1Q9NWF4 448 aa13.74□□□□□ -0.21
CDC42SE2-212ENST00000515533 ROBO1Q9Y6N7 1651 aa13.74□□□□□ -0.21
CDC42SE2-212ENST00000515533 UNC13BO14795 1591 aa13.74□□□□□ -0.21
CDC42SE2-212ENST00000515533 BCANQ96GW7 911 aa13.73□□□□□ -0.21
CDC42SE2-212ENST00000515533 NWD1Q149M9 1564 aa13.73□□□□□ -0.21
CDC42SE2-212ENST00000515533 TMEM94Q12767 1356 aa13.72□□□□□ -0.21
CDC42SE2-212ENST00000515533 SLC26A8Q96RN1 970 aa13.72□□□□□ -0.21
CDC42SE2-212ENST00000515533 NKTRP30414 1462 aaKnown RBP13.72□□□□□ -0.21
CDC42SE2-212ENST00000515533 E9PCH4 1651 aa13.72□□□□□ -0.21
CDC42SE2-212ENST00000515533 TMEM131LA2VDJ0 1609 aa13.72□□□□□ -0.21
CDC42SE2-212ENST00000515533 ERBB3P21860 1342 aa13.71□□□□□ -0.21
CDC42SE2-212ENST00000515533 KCNA6P17658 529 aa13.71□□□□□ -0.21
CDC42SE2-212ENST00000515533 PROSER2Q86WR7 435 aaPredicted RBP13.7□□□□□ -0.22
CDC42SE2-212ENST00000515533 MICALL2Q8IY33 904 aa13.7□□□□□ -0.22
CDC42SE2-212ENST00000515533 FAM135BQ49AJ0 1406 aa13.7□□□□□ -0.22
CDC42SE2-212ENST00000515533 IQGAP3Q86VI3 1631 aa13.69□□□□□ -0.22
CDC42SE2-212ENST00000515533 RIMBP2O15034 1052 aa13.69□□□□□ -0.22
CDC42SE2-212ENST00000515533 PHLPP1O60346 1717 aa13.68□□□□□ -0.22
CDC42SE2-212ENST00000515533 PPP1R15AO75807 674 aaPredicted RBP13.68□□□□□ -0.22
CDC42SE2-212ENST00000515533 HDGFP51858 240 aaKnown RBP13.68□□□□□ -0.22
CDC42SE2-212ENST00000515533 TMEM92Q6UXU6 159 aa13.68□□□□□ -0.22
CDC42SE2-212ENST00000515533 ZFYVE9O95405 1425 aa13.67□□□□□ -0.22
CDC42SE2-212ENST00000515533 MSH6P52701 1360 aa13.67□□□□□ -0.22
CDC42SE2-212ENST00000515533 RIMS2Q9UQ26 1411 aa13.66□□□□□ -0.22
CDC42SE2-212ENST00000515533 RBM33Q96EV2 1170 aaKnown RBP13.66□□□□□ -0.22
CDC42SE2-212ENST00000515533 PLEKHG1Q9ULL1 1385 aa13.66□□□□□ -0.22
CDC42SE2-212ENST00000515533 CHGAP10645 457 aaKnown RBP13.65□□□□□ -0.22
CDC42SE2-212ENST00000515533 SPHKAPQ2M3C7 1700 aa13.64□□□□□ -0.23
CDC42SE2-212ENST00000515533 DIP2AQ14689 1571 aa13.64□□□□□ -0.23
CDC42SE2-212ENST00000515533 ROCK1Q13464 1354 aa13.64□□□□□ -0.23
CDC42SE2-212ENST00000515533 RIOK3O14730 519 aaKnown RBP13.64□□□□□ -0.23
CDC42SE2-212ENST00000515533 SOX12O15370 315 aa13.64□□□□□ -0.23
CDC42SE2-212ENST00000515533 RNF25Q96BH1 459 aaPredicted RBP13.64□□□□□ -0.23
CDC42SE2-212ENST00000515533 VARS2Q5ST30 1063 aaKnown RBP13.63□□□□□ -0.23
CDC42SE2-212ENST00000515533 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.63□□□□□ -0.23
CDC42SE2-212ENST00000515533 MS4A4AQ96JQ5 239 aa13.63□□□□□ -0.23
CDC42SE2-212ENST00000515533 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.62□□□□□ -0.23
CDC42SE2-212ENST00000515533 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.61□□□□□ -0.23
CDC42SE2-212ENST00000515533 ZFP91Q96JP5 570 aaPredicted RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms