RNA–Protein interactions for RNA: ENST00000515508.6

SPOP-220, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-220ENST00000515508 RGS12O14924 1447 aa27.58■■■□□ 2.01
SPOP-220ENST00000515508 ADGRF5Q8IZF2 1346 aa27.58■■■□□ 2.01
SPOP-220ENST00000515508 ANKRD30BQ9BXX2 1392 aa27.57■■■□□ 2
SPOP-220ENST00000515508 PIK3C2GO75747 1445 aa27.55■■■□□ 2
SPOP-220ENST00000515508 RBM6P78332 1123 aaKnown RBP27.54■■■□□ 2
SPOP-220ENST00000515508 PXDNQ92626 1479 aa27.54■■■□□ 2
SPOP-220ENST00000515508 LRPPRCP42704 1394 aaKnown RBP27.53■■■□□ 2
SPOP-220ENST00000515508 QTRT2Q9H974 415 aaKnown RBP27.53■■■□□ 2
SPOP-220ENST00000515508 ADAMTS2O95450 1211 aa27.52■■■□□ 2
SPOP-220ENST00000515508 MPHOSPH9Q99550 1183 aa27.52■■■□□ 2
SPOP-220ENST00000515508 MYOM2P54296 1465 aa27.51■■■□□ 2
SPOP-220ENST00000515508 NPHP3Q7Z494 1330 aa27.51■■□□□ 1.99
SPOP-220ENST00000515508 NGLY1Q96IV0 654 aa27.51■■□□□ 1.99
SPOP-220ENST00000515508 ABCC11Q96J66 1382 aa27.5■■□□□ 1.99
SPOP-220ENST00000515508 RGL3Q3MIN7 710 aa27.5■■□□□ 1.99
SPOP-220ENST00000515508 FMN2Q9NZ56 1722 aa27.5■■□□□ 1.99
SPOP-220ENST00000515508 MARF1Q9Y4F3 1742 aaKnown RBP27.5■■□□□ 1.99
SPOP-220ENST00000515508 ESCO1Q5FWF5 840 aa27.48■■□□□ 1.99
SPOP-220ENST00000515508 FNBP4Q8N3X1 1017 aaPredicted RBP27.45■■□□□ 1.98
SPOP-220ENST00000515508 KIF1AQ12756 1690 aa27.45■■□□□ 1.98
SPOP-220ENST00000515508 PLEKHH1Q9ULM0 1364 aa27.45■■□□□ 1.98
SPOP-220ENST00000515508 YTHDC2Q9H6S0 1430 aaKnown RBP27.44■■□□□ 1.98
SPOP-220ENST00000515508 WAPLQ7Z5K2 1190 aa27.44■■□□□ 1.98
SPOP-220ENST00000515508 STK26Q9P289 416 aa27.44■■□□□ 1.98
SPOP-220ENST00000515508 NRXN1Q9ULB1 1477 aa27.44■■□□□ 1.98
SPOP-220ENST00000515508 ATRNO75882 1429 aa27.43■■□□□ 1.98
SPOP-220ENST00000515508 USP21Q9UK80 565 aa27.43■■□□□ 1.98
SPOP-220ENST00000515508 ACIN1Q9UKV3 1341 aaKnown RBP27.41■■□□□ 1.98
SPOP-220ENST00000515508 TMEM132EQ6IEE7 984 aa27.41■■□□□ 1.98
SPOP-220ENST00000515508 TRPC5Q9UL62 973 aaPredicted RBP27.41■■□□□ 1.98
SPOP-220ENST00000515508 FOXO3O43524 673 aa27.4■■□□□ 1.98
SPOP-220ENST00000515508 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.38■■□□□ 1.97
SPOP-220ENST00000515508 BCL9LQ86UU0 1499 aa27.38■■□□□ 1.97
SPOP-220ENST00000515508 XPCQ01831 940 aaPredicted RBP27.37■■□□□ 1.97
SPOP-220ENST00000515508 NUTM2FA1L443 756 aa27.36■■□□□ 1.97
SPOP-220ENST00000515508 SIRT1Q96EB6 747 aa27.36■■□□□ 1.97
SPOP-220ENST00000515508 ATAD2Q6PL18 1390 aa27.35■■□□□ 1.97
SPOP-220ENST00000515508 C14orf93Q9H972 538 aaKnown RBP27.35■■□□□ 1.97
SPOP-220ENST00000515508 EP400Q96L91 3159 aa27.35■■□□□ 1.97
SPOP-220ENST00000515508 RGPD8O14715 1765 aaPredicted RBP27.34■■□□□ 1.97
SPOP-220ENST00000515508 USP32Q8NFA0 1604 aa27.31■■□□□ 1.96
SPOP-220ENST00000515508 SPATA31A3Q5VYP0 1347 aa27.31■■□□□ 1.96
SPOP-220ENST00000515508 DLC1Q96QB1 1528 aa27.3■■□□□ 1.96
SPOP-220ENST00000515508 DHX57Q6P158 1386 aaKnown RBP27.29■■□□□ 1.96
SPOP-220ENST00000515508 SLIT2O94813 1529 aa27.28■■□□□ 1.96
SPOP-220ENST00000515508 CFAP70Q5T0N1 1121 aa27.28■■□□□ 1.96
SPOP-220ENST00000515508 ADGRB2O60241 1585 aa27.27■■□□□ 1.96
SPOP-220ENST00000515508 TNS3Q68CZ2 1445 aa27.26■■□□□ 1.95
SPOP-220ENST00000515508 RAB3GAP2Q9H2M9 1393 aa27.26■■□□□ 1.95
SPOP-220ENST00000515508 ABCA3Q99758 1704 aa27.26■■□□□ 1.95
SPOP-220ENST00000515508 ADGRB1O14514 1584 aa27.26■■□□□ 1.95
SPOP-220ENST00000515508 GLI3P10071 1580 aa27.24■■□□□ 1.95
SPOP-220ENST00000515508 KRT28Q7Z3Y7 464 aa27.23■■□□□ 1.95
SPOP-220ENST00000515508 GJD4Q96KN9 370 aaPredicted RBP27.23■■□□□ 1.95
SPOP-220ENST00000515508 PHF8Q9UPP1 1060 aa27.23■■□□□ 1.95
SPOP-220ENST00000515508 ANKARQ7Z5J8 1434 aa27.22■■□□□ 1.95
SPOP-220ENST00000515508 PRAM1Q96QH2 718 aa27.21■■□□□ 1.95
SPOP-220ENST00000515508 PLCH1Q4KWH8 1693 aa27.21■■□□□ 1.95
SPOP-220ENST00000515508 RALGAPBQ86X10 1494 aa27.2■■□□□ 1.95
SPOP-220ENST00000515508 UNC5CLQ8IV45 518 aa27.2■■□□□ 1.94
SPOP-220ENST00000515508 NWD2Q9ULI1 1742 aa27.2■■□□□ 1.94
SPOP-220ENST00000515508 SBNO1A3KN83 1393 aa27.2■■□□□ 1.94
SPOP-220ENST00000515508 SRCAPQ6ZRS2 3230 aa27.19■■□□□ 1.94
SPOP-220ENST00000515508 PSME1Q06323 249 aa27.17■■□□□ 1.94
SPOP-220ENST00000515508 SAFB2Q14151 953 aaKnown RBP eCLIP27.16■■□□□ 1.94
SPOP-220ENST00000515508 TRPM3Q9HCF6 1732 aaPredicted RBP27.16■■□□□ 1.94
SPOP-220ENST00000515508 ARHGEF10O15013 1369 aa27.15■■□□□ 1.94
SPOP-220ENST00000515508 BRWD3Q6RI45 1802 aa27.14■■□□□ 1.94
SPOP-220ENST00000515508 CCDC125Q86Z20 511 aa27.13■■□□□ 1.93
SPOP-220ENST00000515508 POGKQ9P215 609 aa27.13■■□□□ 1.93
SPOP-220ENST00000515508 ALS2Q96Q42 1657 aa27.11■■□□□ 1.93
SPOP-220ENST00000515508 TULP4Q9NRJ4 1543 aa27.11■■□□□ 1.93
SPOP-220ENST00000515508 HAP1P54257 671 aaPredicted RBP27.1■■□□□ 1.93
SPOP-220ENST00000515508 CABLES1Q8TDN4 633 aa27.1■■□□□ 1.93
SPOP-220ENST00000515508 EIF3AQ14152 1382 aaKnown RBP27.09■■□□□ 1.93
SPOP-220ENST00000515508 NRAPQ86VF7 1730 aa27.08■■□□□ 1.93
SPOP-220ENST00000515508 VPS72Q15906 364 aa27.07■■□□□ 1.92
SPOP-220ENST00000515508 PMFBP1Q8TBY8 1022 aa27.07■■□□□ 1.92
SPOP-220ENST00000515508 TRAK1Q9UPV9 953 aa27.07■■□□□ 1.92
SPOP-220ENST00000515508 ARHGEF28Q8N1W1 1705 aaKnown RBP27.07■■□□□ 1.92
SPOP-220ENST00000515508 STAC3Q96MF2 364 aa27.06■■□□□ 1.92
SPOP-220ENST00000515508 CRYBG1Q9Y4K1 1723 aa27.06■■□□□ 1.92
SPOP-220ENST00000515508 BLMP54132 1417 aaPredicted RBP27.06■■□□□ 1.92
SPOP-220ENST00000515508 PRR36Q9H6K5 1346 aa27.05■■□□□ 1.92
SPOP-220ENST00000515508 LMOD2Q6P5Q4 547 aa27.04■■□□□ 1.92
SPOP-220ENST00000515508 DCAF11Q8TEB1 546 aa27.04■■□□□ 1.92
SPOP-220ENST00000515508 HIRIP3Q9BW71 556 aaPredicted RBP27.04■■□□□ 1.92
SPOP-220ENST00000515508 ITSN1Q15811 1721 aa27.03■■□□□ 1.92
SPOP-220ENST00000515508 COL14A1Q05707 1796 aaKnown RBP27.02■■□□□ 1.92
SPOP-220ENST00000515508 MINK1Q8N4C8 1332 aaPredicted RBP27.02■■□□□ 1.92
SPOP-220ENST00000515508 ZRANB1Q9UGI0 708 aa27.02■■□□□ 1.92
SPOP-220ENST00000515508 GPRASP1Q5JY77 1395 aa27.01■■□□□ 1.91
SPOP-220ENST00000515508 ONECUT3O60422 494 aaPredicted RBP27.01■■□□□ 1.91
SPOP-220ENST00000515508 HRCP23327 699 aa27.01■■□□□ 1.91
SPOP-220ENST00000515508 KDM2AQ9Y2K7 1162 aa27.01■■□□□ 1.91
SPOP-220ENST00000515508 WASLO00401 505 aaPredicted RBP27■■□□□ 1.91
SPOP-220ENST00000515508 SEPT12Q8IYM1 358 aa27■■□□□ 1.91
SPOP-220ENST00000515508 FAM83GA6ND36 823 aa26.99■■□□□ 1.91
SPOP-220ENST00000515508 PLEKHG5O94827 1062 aa26.99■■□□□ 1.91
SPOP-220ENST00000515508 ATP7BP35670 1465 aa26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms