RNA–Protein interactions for RNA: ENST00000515056.5

APBB3-221, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 2

Gene APBB3, Length 2,064 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-221ENST00000515056 CCDC184Q52MB2 194 aa19.85■□□□□ 0.77
APBB3-221ENST00000515056 MRS2Q9HD23 443 aa19.84■□□□□ 0.77
APBB3-221ENST00000515056 ERICH6BQ5W0A0 696 aa19.83■□□□□ 0.76
APBB3-221ENST00000515056 CHD2O14647 1828 aaKnown RBP19.82■□□□□ 0.76
APBB3-221ENST00000515056 ZBED9Q6R2W3 1325 aa19.81■□□□□ 0.76
APBB3-221ENST00000515056 WAPLQ7Z5K2 1190 aa19.81■□□□□ 0.76
APBB3-221ENST00000515056 SIRT1Q96EB6 747 aa19.81■□□□□ 0.76
APBB3-221ENST00000515056 ZNF335Q9H4Z2 1342 aaPredicted RBP19.81■□□□□ 0.76
APBB3-221ENST00000515056 ST20-MTHFSA0A0A6YYL1 179 aa19.8■□□□□ 0.76
APBB3-221ENST00000515056 PRAM1Q96QH2 718 aa19.79■□□□□ 0.76
APBB3-221ENST00000515056 ROBO2Q9HCK4 1378 aa19.79■□□□□ 0.76
APBB3-221ENST00000515056 TECPR2O15040 1411 aa19.79■□□□□ 0.76
APBB3-221ENST00000515056 POGKQ9P215 609 aa19.79■□□□□ 0.76
APBB3-221ENST00000515056 SAFB2Q14151 953 aaKnown RBP eCLIP19.77■□□□□ 0.76
APBB3-221ENST00000515056 PROSER2Q86WR7 435 aaPredicted RBP19.77■□□□□ 0.75
APBB3-221ENST00000515056 FAM9BQ8IZU0 186 aa19.76■□□□□ 0.75
APBB3-221ENST00000515056 RBM33Q96EV2 1170 aaKnown RBP19.76■□□□□ 0.75
APBB3-221ENST00000515056 CENPJQ9HC77 1338 aaPredicted RBP19.75■□□□□ 0.75
APBB3-221ENST00000515056 EIF3AQ14152 1382 aaKnown RBP19.75■□□□□ 0.75
APBB3-221ENST00000515056 PLEKHH1Q9ULM0 1364 aa19.75■□□□□ 0.75
APBB3-221ENST00000515056 KTN1Q86UP2 1357 aaKnown RBP19.75■□□□□ 0.75
APBB3-221ENST00000515056 FAM135BQ49AJ0 1406 aa19.75■□□□□ 0.75
APBB3-221ENST00000515056 DLC1Q96QB1 1528 aa19.75■□□□□ 0.75
APBB3-221ENST00000515056 XRN1Q8IZH2 1706 aaKnown RBP19.75■□□□□ 0.75
APBB3-221ENST00000515056 STRCP1A6NGW2 1772 aa19.74■□□□□ 0.75
APBB3-221ENST00000515056 PTCH1Q13635 1447 aa19.73■□□□□ 0.75
APBB3-221ENST00000515056 NWD1Q149M9 1564 aa19.73■□□□□ 0.75
APBB3-221ENST00000515056 KNDC1Q76NI1 1749 aa19.72■□□□□ 0.75
APBB3-221ENST00000515056 ARHGEF28Q8N1W1 1705 aaKnown RBP19.72■□□□□ 0.75
APBB3-221ENST00000515056 CPS1P31327 1500 aa19.72■□□□□ 0.75
APBB3-221ENST00000515056 TESK2Q96S53 571 aa19.72■□□□□ 0.75
APBB3-221ENST00000515056 NKTRP30414 1462 aaKnown RBP19.7■□□□□ 0.74
APBB3-221ENST00000515056 MINK1Q8N4C8 1332 aaPredicted RBP19.7■□□□□ 0.74
APBB3-221ENST00000515056 TMEM94Q12767 1356 aa19.68■□□□□ 0.74
APBB3-221ENST00000515056 SLC24A1O60721 1099 aa19.67■□□□□ 0.74
APBB3-221ENST00000515056 C14orf37Q86TY3 774 aa19.66■□□□□ 0.74
APBB3-221ENST00000515056 RALBP1Q15311 655 aa19.66■□□□□ 0.74
APBB3-221ENST00000515056 POLR3GLQ9BT43 218 aa19.66■□□□□ 0.74
APBB3-221ENST00000515056 LRRC7Q96NW7 1537 aa19.66■□□□□ 0.74
APBB3-221ENST00000515056 SBNO2Q9Y2G9 1366 aa19.65■□□□□ 0.74
APBB3-221ENST00000515056 LTBP4Q8N2S1 1624 aa19.65■□□□□ 0.74
APBB3-221ENST00000515056 DEKP35659 375 aaKnown RBP19.64■□□□□ 0.74
APBB3-221ENST00000515056 C19orf44Q9H6X5 657 aa19.64■□□□□ 0.74
APBB3-221ENST00000515056 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.64■□□□□ 0.74
APBB3-221ENST00000515056 SMG6Q86US8 1419 aaKnown RBP19.63■□□□□ 0.73
APBB3-221ENST00000515056 NCOA3Q9Y6Q9 1424 aa19.63■□□□□ 0.73
APBB3-221ENST00000515056 TMF1P82094 1093 aa19.63■□□□□ 0.73
APBB3-221ENST00000515056 QRICH2Q9H0J4 1663 aa19.63■□□□□ 0.73
APBB3-221ENST00000515056 PNISRQ8TF01 805 aaKnown RBP19.63■□□□□ 0.73
APBB3-221ENST00000515056 PPP4R2Q9NY27 417 aa19.63■□□□□ 0.73
APBB3-221ENST00000515056 BRD4O60885 1362 aaPredicted RBP19.62■□□□□ 0.73
APBB3-221ENST00000515056 WASLO00401 505 aaPredicted RBP19.62■□□□□ 0.73
APBB3-221ENST00000515056 CDK19Q9BWU1 502 aa19.62■□□□□ 0.73
APBB3-221ENST00000515056 EVC2Q86UK5 1308 aa19.61■□□□□ 0.73
APBB3-221ENST00000515056 MYBBP1AQ9BQG0 1328 aaKnown RBP19.6■□□□□ 0.73
APBB3-221ENST00000515056 ADGRL3Q9HAR2 1447 aa19.6■□□□□ 0.73
APBB3-221ENST00000515056 TMC1Q8TDI8 760 aa19.59■□□□□ 0.73
APBB3-221ENST00000515056 CABP2Q9NPB3 220 aa19.59■□□□□ 0.73
APBB3-221ENST00000515056 DISP3Q9P2K9 1392 aa19.59■□□□□ 0.73
APBB3-221ENST00000515056 SRPK2P78362 688 aaKnown RBP19.58■□□□□ 0.73
APBB3-221ENST00000515056 XIRP1Q702N8 1843 aaKnown RBP19.58■□□□□ 0.72
APBB3-221ENST00000515056 NUTM2FA1L443 756 aa19.57■□□□□ 0.72
APBB3-221ENST00000515056 MSH6P52701 1360 aa19.57■□□□□ 0.72
APBB3-221ENST00000515056 ATF3P18847 181 aa19.56■□□□□ 0.72
APBB3-221ENST00000515056 CDCA8Q53HL2 280 aa19.56■□□□□ 0.72
APBB3-221ENST00000515056 NALCNQ8IZF0 1738 aa19.56■□□□□ 0.72
APBB3-221ENST00000515056 NUDCQ9Y266 331 aa19.56■□□□□ 0.72
APBB3-221ENST00000515056 TULP4Q9NRJ4 1543 aa19.55■□□□□ 0.72
APBB3-221ENST00000515056 PUS7Q96PZ0 661 aaKnown RBP19.55■□□□□ 0.72
APBB3-221ENST00000515056 CADPS2Q86UW7 1296 aa19.55■□□□□ 0.72
APBB3-221ENST00000515056 ADGRB2O60241 1585 aa19.54■□□□□ 0.72
APBB3-221ENST00000515056 PARD3Q8TEW0 1356 aa19.54■□□□□ 0.72
APBB3-221ENST00000515056 RNF123Q5XPI4 1314 aa19.54■□□□□ 0.72
APBB3-221ENST00000515056 IRX6P78412 446 aaPredicted RBP19.53■□□□□ 0.72
APBB3-221ENST00000515056 NUDT16Q96DE0 195 aaKnown RBP19.53■□□□□ 0.72
APBB3-221ENST00000515056 PER1O15534 1290 aaPredicted RBP19.52■□□□□ 0.72
APBB3-221ENST00000515056 CERKQ8TCT0 537 aa19.52■□□□□ 0.71
APBB3-221ENST00000515056 PRR36Q9H6K5 1346 aa19.51■□□□□ 0.71
APBB3-221ENST00000515056 CCDC61Q9Y6R9 512 aa19.51■□□□□ 0.71
APBB3-221ENST00000515056 DCCP43146 1447 aa19.51■□□□□ 0.71
APBB3-221ENST00000515056 INSRP06213 1382 aa19.5■□□□□ 0.71
APBB3-221ENST00000515056 NLRP13Q86W25 1043 aa19.5■□□□□ 0.71
APBB3-221ENST00000515056 CDC42BPGQ6DT37 1551 aa19.5■□□□□ 0.71
APBB3-221ENST00000515056 ANO8Q9HCE9 1232 aaPredicted RBP19.49■□□□□ 0.71
APBB3-221ENST00000515056 SLAIN2Q9P270 581 aa19.49■□□□□ 0.71
APBB3-221ENST00000515056 SLC12A5Q9H2X9 1139 aa19.48■□□□□ 0.71
APBB3-221ENST00000515056 CABP1Q9NZU7 370 aa19.48■□□□□ 0.71
APBB3-221ENST00000515056 ATAD2Q6PL18 1390 aa19.47■□□□□ 0.71
APBB3-221ENST00000515056 FMN2Q9NZ56 1722 aa19.46■□□□□ 0.71
APBB3-221ENST00000515056 CNGB1Q14028 1251 aaPredicted RBP19.46■□□□□ 0.71
APBB3-221ENST00000515056 ESCO1Q5FWF5 840 aa19.46■□□□□ 0.71
APBB3-221ENST00000515056 ORAI2Q96SN7 254 aa19.46■□□□□ 0.71
APBB3-221ENST00000515056 MST1RQ04912 1400 aa19.45■□□□□ 0.7
APBB3-221ENST00000515056 ANKARQ7Z5J8 1434 aa19.45■□□□□ 0.7
APBB3-221ENST00000515056 ATP7BP35670 1465 aa19.45■□□□□ 0.7
APBB3-221ENST00000515056 RGPD8O14715 1765 aaPredicted RBP19.45■□□□□ 0.7
APBB3-221ENST00000515056 C1orf167Q5SNV9 1468 aa19.45■□□□□ 0.7
APBB3-221ENST00000515056 PMFBP1Q8TBY8 1022 aa19.44■□□□□ 0.7
APBB3-221ENST00000515056 TOM1O60784 492 aa19.44■□□□□ 0.7
APBB3-221ENST00000515056 USP32Q8NFA0 1604 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms