RNA–Protein interactions for RNA: ENST00000514951.5

SMN1-209, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 2 BASIC

Gene SMN1, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-209ENST00000514951 SIRT1Q96EB6 747 aa27.35■■□□□ 1.97
SMN1-209ENST00000514951 TRAK1Q9UPV9 953 aa27.35■■□□□ 1.97
SMN1-209ENST00000514951 WAPLQ7Z5K2 1190 aa27.34■■□□□ 1.97
SMN1-209ENST00000514951 C14orf37Q86TY3 774 aa27.34■■□□□ 1.97
SMN1-209ENST00000514951 PHF23Q9BUL5 403 aaPredicted RBP27.34■■□□□ 1.97
SMN1-209ENST00000514951 ROBO1Q9Y6N7 1651 aa27.33■■□□□ 1.97
SMN1-209ENST00000514951 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.33■■□□□ 1.96
SMN1-209ENST00000514951 ADGRL3Q9HAR2 1447 aa27.31■■□□□ 1.96
SMN1-209ENST00000514951 SOCS7O14512 581 aa27.3■■□□□ 1.96
SMN1-209ENST00000514951 PRAM1Q96QH2 718 aa27.3■■□□□ 1.96
SMN1-209ENST00000514951 C19orf44Q9H6X5 657 aa27.27■■□□□ 1.96
SMN1-209ENST00000514951 CARD11Q9BXL7 1154 aa27.25■■□□□ 1.95
SMN1-209ENST00000514951 SAFB2Q14151 953 aaKnown RBP eCLIP27.24■■□□□ 1.95
SMN1-209ENST00000514951 POGKQ9P215 609 aa27.24■■□□□ 1.95
SMN1-209ENST00000514951 DCCP43146 1447 aa27.24■■□□□ 1.95
SMN1-209ENST00000514951 SLAIN2Q9P270 581 aa27.23■■□□□ 1.95
SMN1-209ENST00000514951 CDC42BPGQ6DT37 1551 aa27.22■■□□□ 1.95
SMN1-209ENST00000514951 ADGRB2O60241 1585 aa27.2■■□□□ 1.95
SMN1-209ENST00000514951 QRICH2Q9H0J4 1663 aa27.2■■□□□ 1.94
SMN1-209ENST00000514951 ATF3P18847 181 aa27.18■■□□□ 1.94
SMN1-209ENST00000514951 PHLPP1O60346 1717 aa27.18■■□□□ 1.94
SMN1-209ENST00000514951 CADPS2Q86UW7 1296 aa27.17■■□□□ 1.94
SMN1-209ENST00000514951 CENPJQ9HC77 1338 aaPredicted RBP27.17■■□□□ 1.94
SMN1-209ENST00000514951 EIF3AQ14152 1382 aaKnown RBP27.16■■□□□ 1.94
SMN1-209ENST00000514951 MINK1Q8N4C8 1332 aaPredicted RBP27.16■■□□□ 1.94
SMN1-209ENST00000514951 FMN2Q9NZ56 1722 aa27.15■■□□□ 1.94
SMN1-209ENST00000514951 MST1RQ04912 1400 aa27.15■■□□□ 1.94
SMN1-209ENST00000514951 HIRIP3Q9BW71 556 aaPredicted RBP27.14■■□□□ 1.93
SMN1-209ENST00000514951 USP47Q96K76 1375 aa27.11■■□□□ 1.93
SMN1-209ENST00000514951 C1orf167Q5SNV9 1468 aa27.08■■□□□ 1.93
SMN1-209ENST00000514951 USP32Q8NFA0 1604 aa27.07■■□□□ 1.92
SMN1-209ENST00000514951 TULP4Q9NRJ4 1543 aa27.06■■□□□ 1.92
SMN1-209ENST00000514951 WASLO00401 505 aaPredicted RBP27.06■■□□□ 1.92
SMN1-209ENST00000514951 SBNO2Q9Y2G9 1366 aa27.05■■□□□ 1.92
SMN1-209ENST00000514951 RGPD8O14715 1765 aaPredicted RBP27.05■■□□□ 1.92
SMN1-209ENST00000514951 COL16A1Q07092 1604 aaPredicted RBP27.05■■□□□ 1.92
SMN1-209ENST00000514951 ST20-MTHFSA0A0A6YYL1 179 aa27.04■■□□□ 1.92
SMN1-209ENST00000514951 JCADQ9P266 1359 aa27.04■■□□□ 1.92
SMN1-209ENST00000514951 NUTM2FA1L443 756 aa27.03■■□□□ 1.92
SMN1-209ENST00000514951 TESK2Q96S53 571 aa27.01■■□□□ 1.91
SMN1-209ENST00000514951 CDK19Q9BWU1 502 aa27.01■■□□□ 1.91
SMN1-209ENST00000514951 ANKARQ7Z5J8 1434 aa27.01■■□□□ 1.91
SMN1-209ENST00000514951 AHDC1Q5TGY3 1603 aaPredicted RBP27.01■■□□□ 1.91
SMN1-209ENST00000514951 BRINP3Q76B58 766 aa27■■□□□ 1.91
SMN1-209ENST00000514951 ATP7BP35670 1465 aa26.99■■□□□ 1.91
SMN1-209ENST00000514951 ORAI2Q96SN7 254 aa26.99■■□□□ 1.91
SMN1-209ENST00000514951 PRR36Q9H6K5 1346 aa26.99■■□□□ 1.91
SMN1-209ENST00000514951 RGS17Q9UGC6 210 aaPredicted RBP26.98■■□□□ 1.91
SMN1-209ENST00000514951 EVC2Q86UK5 1308 aa26.96■■□□□ 1.91
SMN1-209ENST00000514951 TOPAZ1Q8N9V7 1692 aa26.95■■□□□ 1.91
SMN1-209ENST00000514951 NHSL1Q5SYE7 1610 aa26.95■■□□□ 1.9
SMN1-209ENST00000514951 EIF4G2P78344 907 aaKnown RBP eCLIP26.94■■□□□ 1.9
SMN1-209ENST00000514951 ESCO1Q5FWF5 840 aa26.94■■□□□ 1.9
SMN1-209ENST00000514951 CABP2Q9NPB3 220 aa26.94■■□□□ 1.9
SMN1-209ENST00000514951 ITSN1Q15811 1721 aa26.94■■□□□ 1.9
SMN1-209ENST00000514951 HSPA5P11021 654 aaKnown RBP26.93■■□□□ 1.9
SMN1-209ENST00000514951 NUDT16Q96DE0 195 aaKnown RBP26.93■■□□□ 1.9
SMN1-209ENST00000514951 KIF1AQ12756 1690 aa26.93■■□□□ 1.9
SMN1-209ENST00000514951 SRPK2P78362 688 aaKnown RBP26.92■■□□□ 1.9
SMN1-209ENST00000514951 MEX3CQ5U5Q3 659 aaKnown RBP26.92■■□□□ 1.9
SMN1-209ENST00000514951 SHPRHQ149N8 1683 aa26.91■■□□□ 1.9
SMN1-209ENST00000514951 SPATA31A6Q5VVP1 1343 aa26.89■■□□□ 1.9
SMN1-209ENST00000514951 ZEB1P37275 1124 aaPredicted RBP26.88■■□□□ 1.89
SMN1-209ENST00000514951 POTEAQ6S8J7 498 aa26.88■■□□□ 1.89
SMN1-209ENST00000514951 DDX17Q92841 729 aaKnown RBP26.88■■□□□ 1.89
SMN1-209ENST00000514951 PHF8Q9UPP1 1060 aa26.88■■□□□ 1.89
SMN1-209ENST00000514951 LRP6O75581 1613 aa26.87■■□□□ 1.89
SMN1-209ENST00000514951 CCDC61Q9Y6R9 512 aa26.87■■□□□ 1.89
SMN1-209ENST00000514951 NUTM2BA6NNL0 878 aaPredicted RBP26.86■■□□□ 1.89
SMN1-209ENST00000514951 NUTM2EB1AL46 878 aaPredicted RBP26.86■■□□□ 1.89
SMN1-209ENST00000514951 SLC24A1O60721 1099 aa26.86■■□□□ 1.89
SMN1-209ENST00000514951 NUTM2AQ8IVF1 878 aaPredicted RBP26.86■■□□□ 1.89
SMN1-209ENST00000514951 PMFBP1Q8TBY8 1022 aa26.85■■□□□ 1.89
SMN1-209ENST00000514951 FOXO3O43524 673 aa26.84■■□□□ 1.89
SMN1-209ENST00000514951 PPIP5K1Q6PFW1 1433 aa26.84■■□□□ 1.89
SMN1-209ENST00000514951 TMF1P82094 1093 aa26.83■■□□□ 1.89
SMN1-209ENST00000514951 PXDNQ92626 1479 aa26.83■■□□□ 1.88
SMN1-209ENST00000514951 ATAD2Q6PL18 1390 aa26.82■■□□□ 1.88
SMN1-209ENST00000514951 PUS7Q96PZ0 661 aaKnown RBP26.82■■□□□ 1.88
SMN1-209ENST00000514951 PLEKHG3A1L390 1219 aa26.81■■□□□ 1.88
SMN1-209ENST00000514951 NPHP3Q7Z494 1330 aa26.81■■□□□ 1.88
SMN1-209ENST00000514951 SOS2Q07890 1332 aaPredicted RBP26.8■■□□□ 1.88
SMN1-209ENST00000514951 LRRC59Q96AG4 307 aaKnown RBP26.79■■□□□ 1.88
SMN1-209ENST00000514951 POLR3AO14802 1390 aaPredicted RBP26.79■■□□□ 1.88
SMN1-209ENST00000514951 XPCQ01831 940 aaPredicted RBP26.78■■□□□ 1.88
SMN1-209ENST00000514951 CABP1Q9NZU7 370 aa26.78■■□□□ 1.88
SMN1-209ENST00000514951 NGDNQ8NEJ9 315 aaKnown RBP26.76■■□□□ 1.87
SMN1-209ENST00000514951 ACEP12821 1306 aa26.76■■□□□ 1.87
SMN1-209ENST00000514951 TRPM3Q9HCF6 1732 aaPredicted RBP26.75■■□□□ 1.87
SMN1-209ENST00000514951 AKAP12Q02952 1782 aa26.74■■□□□ 1.87
SMN1-209ENST00000514951 CDCA8Q53HL2 280 aa26.73■■□□□ 1.87
SMN1-209ENST00000514951 ZNF772Q68DY9 489 aaPredicted RBP26.73■■□□□ 1.87
SMN1-209ENST00000514951 KRT28Q7Z3Y7 464 aa26.73■■□□□ 1.87
SMN1-209ENST00000514951 MYOM1P52179 1685 aa26.73■■□□□ 1.87
SMN1-209ENST00000514951 PNPLA6Q8IY17 1366 aa26.72■■□□□ 1.87
SMN1-209ENST00000514951 C11orf95C9JLR9 678 aaPredicted RBP26.72■■□□□ 1.87
SMN1-209ENST00000514951 PSME1Q06323 249 aa26.72■■□□□ 1.87
SMN1-209ENST00000514951 CD163L1Q9NR16 1453 aa26.72■■□□□ 1.87
SMN1-209ENST00000514951 SLC12A5Q9H2X9 1139 aa26.71■■□□□ 1.87
SMN1-209ENST00000514951 TMC1Q8TDI8 760 aa26.7■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms