RNA–Protein interactions for RNA: ENST00000514949.1

SNX2-213, Transcript of sorting nexin 2, humanhuman

TSL 2 BASIC

Gene SNX2, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-213ENST00000514949 ARHGEF28Q8N1W1 1705 aaKnown RBP22.83■■□□□ 1.25
SNX2-213ENST00000514949 VGFO15240 615 aaPredicted RBP22.83■■□□□ 1.25
SNX2-213ENST00000514949 NCBP3Q53F19 620 aaKnown RBP22.83■■□□□ 1.25
SNX2-213ENST00000514949 MORC1Q86VD1 984 aa22.82■■□□□ 1.24
SNX2-213ENST00000514949 NINLQ9Y2I6 1382 aa22.82■■□□□ 1.24
SNX2-213ENST00000514949 PHF23Q9BUL5 403 aaPredicted RBP22.82■■□□□ 1.24
SNX2-213ENST00000514949 NSD2O96028 1365 aa22.82■■□□□ 1.24
SNX2-213ENST00000514949 WWC1Q8IX03 1113 aa22.81■■□□□ 1.24
SNX2-213ENST00000514949 TMEM132EQ6IEE7 984 aa22.81■■□□□ 1.24
SNX2-213ENST00000514949 IQSEC2Q5JU85 1478 aa22.8■■□□□ 1.24
SNX2-213ENST00000514949 CGNL1Q0VF96 1302 aa22.8■■□□□ 1.24
SNX2-213ENST00000514949 TULP4Q9NRJ4 1543 aa22.79■■□□□ 1.24
SNX2-213ENST00000514949 PDE3AQ14432 1141 aa22.79■■□□□ 1.24
SNX2-213ENST00000514949 EVC2Q86UK5 1308 aa22.79■■□□□ 1.24
SNX2-213ENST00000514949 DMRT2Q9Y5R5 561 aa22.79■■□□□ 1.24
SNX2-213ENST00000514949 RICTORQ6R327 1708 aa22.79■■□□□ 1.24
SNX2-213ENST00000514949 ANKRD36BQ8N2N9 1353 aa22.78■■□□□ 1.24
SNX2-213ENST00000514949 RUNDC1Q96C34 613 aa22.78■■□□□ 1.24
SNX2-213ENST00000514949 SLC52A1Q9NWF4 448 aa22.76■■□□□ 1.23
SNX2-213ENST00000514949 BCAR3O75815 825 aa22.76■■□□□ 1.23
SNX2-213ENST00000514949 CCDC27Q2M243 656 aa22.76■■□□□ 1.23
SNX2-213ENST00000514949 RAPGEF3O95398 923 aa22.75■■□□□ 1.23
SNX2-213ENST00000514949 NPM2Q86SE8 214 aaKnown RBP22.75■■□□□ 1.23
SNX2-213ENST00000514949 WDR63Q8IWG1 891 aa22.74■■□□□ 1.23
SNX2-213ENST00000514949 SKAP1Q86WV1 359 aa22.73■■□□□ 1.23
SNX2-213ENST00000514949 DDRGK1Q96HY6 314 aa22.73■■□□□ 1.23
SNX2-213ENST00000514949 IDI1Q13907 227 aa22.72■■□□□ 1.23
SNX2-213ENST00000514949 CFAP53Q96M91 514 aa22.72■■□□□ 1.23
SNX2-213ENST00000514949 MTHFSP49914 203 aa22.71■■□□□ 1.23
SNX2-213ENST00000514949 FAM161AQ3B820 660 aa22.71■■□□□ 1.23
SNX2-213ENST00000514949 AAMPQ13685 434 aa22.7■■□□□ 1.23
SNX2-213ENST00000514949 NBR1Q14596 966 aa22.7■■□□□ 1.23
SNX2-213ENST00000514949 TCP11L2Q8N4U5 519 aa22.7■■□□□ 1.23
SNX2-213ENST00000514949 DEKP35659 375 aaKnown RBP22.7■■□□□ 1.22
SNX2-213ENST00000514949 TMEM131LA2VDJ0 1609 aa22.69■■□□□ 1.22
SNX2-213ENST00000514949 C8orf34Q49A92 452 aa22.68■■□□□ 1.22
SNX2-213ENST00000514949 BCL11AQ9H165 835 aa22.68■■□□□ 1.22
SNX2-213ENST00000514949 ABCC11Q96J66 1382 aa22.68■■□□□ 1.22
SNX2-213ENST00000514949 PREX1Q8TCU6 1659 aa22.67■■□□□ 1.22
SNX2-213ENST00000514949 ADGRB2O60241 1585 aa22.67■■□□□ 1.22
SNX2-213ENST00000514949 USP35Q9P2H5 1018 aa22.66■■□□□ 1.22
SNX2-213ENST00000514949 TNNT2P45379 298 aaPredicted RBP22.65■■□□□ 1.22
SNX2-213ENST00000514949 RARSP54136 660 aaKnown RBP22.65■■□□□ 1.22
SNX2-213ENST00000514949 YEATS2Q9ULM3 1422 aa22.65■■□□□ 1.22
SNX2-213ENST00000514949 MED14O60244 1454 aa22.65■■□□□ 1.22
SNX2-213ENST00000514949 PTPRMP28827 1452 aa22.64■■□□□ 1.22
SNX2-213ENST00000514949 CLTCQ00610 1675 aaKnown RBP22.64■■□□□ 1.22
SNX2-213ENST00000514949 RTL5Q5HYW3 569 aaPredicted RBP22.64■■□□□ 1.21
SNX2-213ENST00000514949 CLUAP1Q96AJ1 413 aa22.63■■□□□ 1.21
SNX2-213ENST00000514949 MYO5BQ9ULV0 1848 aa22.63■■□□□ 1.21
SNX2-213ENST00000514949 ATAD2Q6PL18 1390 aa22.62■■□□□ 1.21
SNX2-213ENST00000514949 PPM1GO15355 546 aaPredicted RBP22.62■■□□□ 1.21
SNX2-213ENST00000514949 CABP2Q9NPB3 220 aa22.62■■□□□ 1.21
SNX2-213ENST00000514949 A0A1W2PP64 1363 aa22.62■■□□□ 1.21
SNX2-213ENST00000514949 NUTM2DQ5VT03 806 aaPredicted RBP22.61■■□□□ 1.21
SNX2-213ENST00000514949 IGHDP01880 384 aa22.6■■□□□ 1.21
SNX2-213ENST00000514949 ANKRD26Q9UPS8 1709 aa22.6■■□□□ 1.21
SNX2-213ENST00000514949 RRP7AQ9Y3A4 280 aaKnown RBP22.6■■□□□ 1.21
SNX2-213ENST00000514949 COL3A1P02461 1466 aaPredicted RBP22.59■■□□□ 1.21
SNX2-213ENST00000514949 CT47B1P0C2W7 299 aaPredicted RBP22.58■■□□□ 1.21
SNX2-213ENST00000514949 MYH16Q9H6N6 1097 aa22.58■■□□□ 1.21
SNX2-213ENST00000514949 YTHDC2Q9H6S0 1430 aaKnown RBP22.58■■□□□ 1.21
SNX2-213ENST00000514949 NEUROD2Q15784 382 aa22.58■■□□□ 1.2
SNX2-213ENST00000514949 PANK1Q8TE04 598 aa22.58■■□□□ 1.2
SNX2-213ENST00000514949 VIRMAQ69YN4 1812 aaKnown RBP22.58■■□□□ 1.2
SNX2-213ENST00000514949 NLRP1Q9C000 1473 aa22.57■■□□□ 1.2
SNX2-213ENST00000514949 MAPK8IP3Q9UPT6 1336 aa22.57■■□□□ 1.2
SNX2-213ENST00000514949 CD163L1Q9NR16 1453 aa22.57■■□□□ 1.2
SNX2-213ENST00000514949 ZMYM3Q14202 1370 aa22.57■■□□□ 1.2
SNX2-213ENST00000514949 CANXP27824 592 aaKnown RBP22.57■■□□□ 1.2
SNX2-213ENST00000514949 COG6Q9Y2V7 657 aa22.57■■□□□ 1.2
SNX2-213ENST00000514949 TERF2IPQ9NYB0 399 aa22.55■■□□□ 1.2
SNX2-213ENST00000514949 REREQ9P2R6 1566 aa22.55■■□□□ 1.2
SNX2-213ENST00000514949 U2AF1L5P0DN76 240 aaPredicted RBP22.55■■□□□ 1.2
SNX2-213ENST00000514949 RGS3P49796 1198 aa22.55■■□□□ 1.2
SNX2-213ENST00000514949 U2AF1Q01081 240 aaKnown RBP eCLIP22.55■■□□□ 1.2
SNX2-213ENST00000514949 PLEKHF1Q96S99 279 aa22.54■■□□□ 1.2
SNX2-213ENST00000514949 PPP6R1Q9UPN7 881 aa22.54■■□□□ 1.2
SNX2-213ENST00000514949 PMFBP1Q8TBY8 1022 aa22.54■■□□□ 1.2
SNX2-213ENST00000514949 ALKQ9UM73 1620 aa22.54■■□□□ 1.2
SNX2-213ENST00000514949 SRPK2P78362 688 aaKnown RBP22.53■■□□□ 1.2
SNX2-213ENST00000514949 ARHGEF40Q8TER5 1519 aa22.52■■□□□ 1.2
SNX2-213ENST00000514949 FYB1O15117 783 aa22.52■■□□□ 1.2
SNX2-213ENST00000514949 PNPLA6Q8IY17 1366 aa22.52■■□□□ 1.19
SNX2-213ENST00000514949 AGLP35573 1532 aa22.51■■□□□ 1.19
SNX2-213ENST00000514949 STK26Q9P289 416 aa22.51■■□□□ 1.19
SNX2-213ENST00000514949 FRAT1Q92837 279 aaPredicted RBP22.51■■□□□ 1.19
SNX2-213ENST00000514949 PRAM1Q96QH2 718 aa22.51■■□□□ 1.19
SNX2-213ENST00000514949 SAFB2Q14151 953 aaKnown RBP eCLIP22.5■■□□□ 1.19
SNX2-213ENST00000514949 DLC1Q96QB1 1528 aa22.5■■□□□ 1.19
SNX2-213ENST00000514949 NEFMP07197 916 aa22.49■■□□□ 1.19
SNX2-213ENST00000514949 RLBP1P12271 317 aa22.49■■□□□ 1.19
SNX2-213ENST00000514949 LAS1LQ9Y4W2 734 aaKnown RBP22.49■■□□□ 1.19
SNX2-213ENST00000514949 IL16Q14005 1332 aa22.49■■□□□ 1.19
SNX2-213ENST00000514949 GGNBP2Q9H3C7 697 aa22.48■■□□□ 1.19
SNX2-213ENST00000514949 TMPOP42166 694 aaKnown RBP22.47■■□□□ 1.19
SNX2-213ENST00000514949 POGKQ9P215 609 aa22.47■■□□□ 1.19
SNX2-213ENST00000514949 CDC42BPGQ6DT37 1551 aa22.46■■□□□ 1.19
SNX2-213ENST00000514949 PCDHB15Q9Y5E8 787 aa22.46■■□□□ 1.19
SNX2-213ENST00000514949 MINK1Q8N4C8 1332 aaPredicted RBP22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms