RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 XIRP1Q702N8 1843 aaKnown RBP16.91■□□□□ 0.3
PDLIM5-220ENST00000514830 SLC24A1O60721 1099 aa16.89■□□□□ 0.29
PDLIM5-220ENST00000514830 STK26Q9P289 416 aa16.89■□□□□ 0.29
PDLIM5-220ENST00000514830 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.89■□□□□ 0.29
PDLIM5-220ENST00000514830 CENPJQ9HC77 1338 aaPredicted RBP16.89■□□□□ 0.29
PDLIM5-220ENST00000514830 NALCNQ8IZF0 1738 aa16.87■□□□□ 0.29
PDLIM5-220ENST00000514830 PIP4K2BP78356 416 aa16.87■□□□□ 0.29
PDLIM5-220ENST00000514830 LRRC7Q96NW7 1537 aa16.86■□□□□ 0.29
PDLIM5-220ENST00000514830 ST20-MTHFSA0A0A6YYL1 179 aa16.86■□□□□ 0.29
PDLIM5-220ENST00000514830 HSPA5P11021 654 aaKnown RBP16.86■□□□□ 0.29
PDLIM5-220ENST00000514830 PRAM1Q96QH2 718 aa16.86■□□□□ 0.29
PDLIM5-220ENST00000514830 CDC42BPGQ6DT37 1551 aa16.85■□□□□ 0.29
PDLIM5-220ENST00000514830 TESK2Q96S53 571 aa16.85■□□□□ 0.29
PDLIM5-220ENST00000514830 PLEKHH1Q9ULM0 1364 aa16.85■□□□□ 0.29
PDLIM5-220ENST00000514830 ADGRL3Q9HAR2 1447 aa16.85■□□□□ 0.29
PDLIM5-220ENST00000514830 POGKQ9P215 609 aa16.84■□□□□ 0.29
PDLIM5-220ENST00000514830 DCCP43146 1447 aa16.83■□□□□ 0.28
PDLIM5-220ENST00000514830 HSPA1LP34931 641 aa16.82■□□□□ 0.28
PDLIM5-220ENST00000514830 WAPLQ7Z5K2 1190 aa16.82■□□□□ 0.28
PDLIM5-220ENST00000514830 PROSER2Q86WR7 435 aaPredicted RBP16.82■□□□□ 0.28
PDLIM5-220ENST00000514830 FMN2Q9NZ56 1722 aa16.82■□□□□ 0.28
PDLIM5-220ENST00000514830 TULP4Q9NRJ4 1543 aa16.81■□□□□ 0.28
PDLIM5-220ENST00000514830 PUS7Q96PZ0 661 aaKnown RBP16.81■□□□□ 0.28
PDLIM5-220ENST00000514830 TMEM94Q12767 1356 aa16.8■□□□□ 0.28
PDLIM5-220ENST00000514830 EVC2Q86UK5 1308 aa16.77■□□□□ 0.28
PDLIM5-220ENST00000514830 TMF1P82094 1093 aa16.77■□□□□ 0.28
PDLIM5-220ENST00000514830 C19orf44Q9H6X5 657 aa16.77■□□□□ 0.28
PDLIM5-220ENST00000514830 ITSN1Q15811 1721 aa16.76■□□□□ 0.27
PDLIM5-220ENST00000514830 TOPAZ1Q8N9V7 1692 aa16.76■□□□□ 0.27
PDLIM5-220ENST00000514830 MINK1Q8N4C8 1332 aaPredicted RBP16.75■□□□□ 0.27
PDLIM5-220ENST00000514830 USP32Q8NFA0 1604 aa16.75■□□□□ 0.27
PDLIM5-220ENST00000514830 WASLO00401 505 aaPredicted RBP16.75■□□□□ 0.27
PDLIM5-220ENST00000514830 SAFB2Q14151 953 aaKnown RBP eCLIP16.75■□□□□ 0.27
PDLIM5-220ENST00000514830 CDCA8Q53HL2 280 aa16.75■□□□□ 0.27
PDLIM5-220ENST00000514830 ANKARQ7Z5J8 1434 aa16.75■□□□□ 0.27
PDLIM5-220ENST00000514830 MSH6P52701 1360 aa16.74■□□□□ 0.27
PDLIM5-220ENST00000514830 ATP7BP35670 1465 aa16.73■□□□□ 0.27
PDLIM5-220ENST00000514830 MED1Q15648 1581 aaPredicted RBP16.72■□□□□ 0.27
PDLIM5-220ENST00000514830 MYOM1P52179 1685 aa16.72■□□□□ 0.27
PDLIM5-220ENST00000514830 RGPD8O14715 1765 aaPredicted RBP16.72■□□□□ 0.27
PDLIM5-220ENST00000514830 HIRIP3Q9BW71 556 aaPredicted RBP16.72■□□□□ 0.27
PDLIM5-220ENST00000514830 CDK19Q9BWU1 502 aa16.71■□□□□ 0.27
PDLIM5-220ENST00000514830 ATAD2Q6PL18 1390 aa16.71■□□□□ 0.27
PDLIM5-220ENST00000514830 CCDC7Q96M83 1385 aa16.7■□□□□ 0.26
PDLIM5-220ENST00000514830 NINLQ9Y2I6 1382 aa16.7■□□□□ 0.26
PDLIM5-220ENST00000514830 C11orf95C9JLR9 678 aaPredicted RBP16.7■□□□□ 0.26
PDLIM5-220ENST00000514830 CADPS2Q86UW7 1296 aa16.7■□□□□ 0.26
PDLIM5-220ENST00000514830 MST1RQ04912 1400 aa16.7■□□□□ 0.26
PDLIM5-220ENST00000514830 KIF7Q2M1P5 1343 aa16.7■□□□□ 0.26
PDLIM5-220ENST00000514830 ZNF316A6NFI3 1004 aaPredicted RBP16.69■□□□□ 0.26
PDLIM5-220ENST00000514830 C14orf37Q86TY3 774 aa16.69■□□□□ 0.26
PDLIM5-220ENST00000514830 RBM33Q96EV2 1170 aaKnown RBP16.69■□□□□ 0.26
PDLIM5-220ENST00000514830 KIF1AQ12756 1690 aa16.68■□□□□ 0.26
PDLIM5-220ENST00000514830 WASHC2AQ641Q2 1341 aa16.68■□□□□ 0.26
PDLIM5-220ENST00000514830 ATF3P18847 181 aa16.67■□□□□ 0.26
PDLIM5-220ENST00000514830 C1orf167Q5SNV9 1468 aa16.67■□□□□ 0.26
PDLIM5-220ENST00000514830 AKAP12Q02952 1782 aa16.66■□□□□ 0.26
PDLIM5-220ENST00000514830 SRPK2P78362 688 aaKnown RBP16.66■□□□□ 0.26
PDLIM5-220ENST00000514830 PRR36Q9H6K5 1346 aa16.66■□□□□ 0.26
PDLIM5-220ENST00000514830 NUDT16Q96DE0 195 aaKnown RBP16.65■□□□□ 0.26
PDLIM5-220ENST00000514830 CABP2Q9NPB3 220 aa16.65■□□□□ 0.26
PDLIM5-220ENST00000514830 CCDC61Q9Y6R9 512 aa16.65■□□□□ 0.26
PDLIM5-220ENST00000514830 PLEKHG3A1L390 1219 aa16.63■□□□□ 0.25
PDLIM5-220ENST00000514830 PPIP5K1Q6PFW1 1433 aa16.62■□□□□ 0.25
PDLIM5-220ENST00000514830 MON2Q7Z3U7 1717 aa16.62■□□□□ 0.25
PDLIM5-220ENST00000514830 POLR3AO14802 1390 aaPredicted RBP16.62■□□□□ 0.25
PDLIM5-220ENST00000514830 CD163L1Q9NR16 1453 aa16.61■□□□□ 0.25
PDLIM5-220ENST00000514830 CPSF1Q10570 1443 aaKnown RBP16.61■□□□□ 0.25
PDLIM5-220ENST00000514830 SLAIN2Q9P270 581 aa16.6■□□□□ 0.25
PDLIM5-220ENST00000514830 NHSL1Q5SYE7 1610 aa16.59■□□□□ 0.25
PDLIM5-220ENST00000514830 ANKRD36BQ8N2N9 1353 aa16.59■□□□□ 0.25
PDLIM5-220ENST00000514830 NRKQ7Z2Y5 1582 aa16.59■□□□□ 0.25
PDLIM5-220ENST00000514830 BRD4O60885 1362 aaPredicted RBP16.58■□□□□ 0.24
PDLIM5-220ENST00000514830 ROBO1Q9Y6N7 1651 aa16.58■□□□□ 0.24
PDLIM5-220ENST00000514830 CABP1Q9NZU7 370 aa16.57■□□□□ 0.24
PDLIM5-220ENST00000514830 PHF8Q9UPP1 1060 aa16.57■□□□□ 0.24
PDLIM5-220ENST00000514830 ZNF692Q9BU19 519 aaPredicted RBP16.56■□□□□ 0.24
PDLIM5-220ENST00000514830 SLC12A5Q9H2X9 1139 aa16.56■□□□□ 0.24
PDLIM5-220ENST00000514830 TERF2IPQ9NYB0 399 aa16.56■□□□□ 0.24
PDLIM5-220ENST00000514830 AHDC1Q5TGY3 1603 aaPredicted RBP16.56■□□□□ 0.24
PDLIM5-220ENST00000514830 NUTM2FA1L443 756 aa16.55■□□□□ 0.24
PDLIM5-220ENST00000514830 ESCO1Q5FWF5 840 aa16.55■□□□□ 0.24
PDLIM5-220ENST00000514830 BRINP3Q76B58 766 aa16.55■□□□□ 0.24
PDLIM5-220ENST00000514830 TRPM3Q9HCF6 1732 aaPredicted RBP16.55■□□□□ 0.24
PDLIM5-220ENST00000514830 A0A1W2PP64 1363 aa16.54■□□□□ 0.24
PDLIM5-220ENST00000514830 ACEP12821 1306 aa16.54■□□□□ 0.24
PDLIM5-220ENST00000514830 ORAI2Q96SN7 254 aa16.54■□□□□ 0.24
PDLIM5-220ENST00000514830 USP6P35125 1406 aa16.53■□□□□ 0.24
PDLIM5-220ENST00000514830 SSH2Q76I76 1423 aa16.53■□□□□ 0.24
PDLIM5-220ENST00000514830 TMC1Q8TDI8 760 aa16.53■□□□□ 0.24
PDLIM5-220ENST00000514830 EDC4Q6P2E9 1401 aaKnown RBP16.53■□□□□ 0.24
PDLIM5-220ENST00000514830 USP54Q70EL1 1684 aa16.53■□□□□ 0.24
PDLIM5-220ENST00000514830 HDGFL2Q7Z4V5 671 aaPredicted RBP16.52■□□□□ 0.24
PDLIM5-220ENST00000514830 POLR3GLQ9BT43 218 aa16.52■□□□□ 0.24
PDLIM5-220ENST00000514830 PXDNQ92626 1479 aa16.52■□□□□ 0.23
PDLIM5-220ENST00000514830 NPHP3Q7Z494 1330 aa16.51■□□□□ 0.23
PDLIM5-220ENST00000514830 PANK3Q9H999 370 aa16.51■□□□□ 0.23
PDLIM5-220ENST00000514830 KIF20BQ96Q89 1820 aa16.51■□□□□ 0.23
PDLIM5-220ENST00000514830 KTN1Q86UP2 1357 aaKnown RBP16.51■□□□□ 0.23
PDLIM5-220ENST00000514830 ANKRD26Q9UPS8 1709 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms