RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 MYO3AQ8NEV4 1616 aa9.73□□□□□ -0.85
PDLIM5-219ENST00000514743 HECW2Q9P2P5 1572 aa9.73□□□□□ -0.85
PDLIM5-219ENST00000514743 MYOM2P54296 1465 aa9.72□□□□□ -0.85
PDLIM5-219ENST00000514743 PPLO60437 1756 aa9.72□□□□□ -0.85
PDLIM5-219ENST00000514743 RNF123Q5XPI4 1314 aa9.72□□□□□ -0.85
PDLIM5-219ENST00000514743 KDM5AP29375 1690 aaKnown RBP9.72□□□□□ -0.85
PDLIM5-219ENST00000514743 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.72□□□□□ -0.85
PDLIM5-219ENST00000514743 SCAF11Q99590 1463 aaKnown RBP9.71□□□□□ -0.85
PDLIM5-219ENST00000514743 ZC3H13Q5T200 1668 aaKnown RBP9.71□□□□□ -0.85
PDLIM5-219ENST00000514743 SIGLEC1Q9BZZ2 1709 aa9.71□□□□□ -0.85
PDLIM5-219ENST00000514743 ADGRB3O60242 1522 aa9.71□□□□□ -0.86
PDLIM5-219ENST00000514743 TMC1Q8TDI8 760 aa9.71□□□□□ -0.86
PDLIM5-219ENST00000514743 NUDCQ9Y266 331 aa9.71□□□□□ -0.86
PDLIM5-219ENST00000514743 NRXN1Q9ULB1 1477 aa9.71□□□□□ -0.86
PDLIM5-219ENST00000514743 POGZQ7Z3K3 1410 aa9.71□□□□□ -0.86
PDLIM5-219ENST00000514743 ZMYM4Q5VZL5 1548 aa9.71□□□□□ -0.86
PDLIM5-219ENST00000514743 B4GALNT3Q6L9W6 998 aa9.71□□□□□ -0.86
PDLIM5-219ENST00000514743 ANP32AP39687 249 aaKnown RBP9.7□□□□□ -0.86
PDLIM5-219ENST00000514743 KANK1Q14678 1352 aa9.7□□□□□ -0.86
PDLIM5-219ENST00000514743 CFAP65Q6ZU64 1925 aaKnown RBP9.7□□□□□ -0.86
PDLIM5-219ENST00000514743 TMED8Q6PL24 325 aaPredicted RBP9.7□□□□□ -0.86
PDLIM5-219ENST00000514743 CENPJQ9HC77 1338 aaPredicted RBP9.7□□□□□ -0.86
PDLIM5-219ENST00000514743 KIF3BO15066 747 aa9.69□□□□□ -0.86
PDLIM5-219ENST00000514743 GSE1Q14687 1217 aa9.69□□□□□ -0.86
PDLIM5-219ENST00000514743 MLH3Q9UHC1 1453 aa9.69□□□□□ -0.86
PDLIM5-219ENST00000514743 PATL2C9JE40 543 aaKnown RBP9.69□□□□□ -0.86
PDLIM5-219ENST00000514743 TICAM2Q86XR7 235 aa9.69□□□□□ -0.86
PDLIM5-219ENST00000514743 PPP4R2Q9NY27 417 aa9.69□□□□□ -0.86
PDLIM5-219ENST00000514743 RICTORQ6R327 1708 aa9.69□□□□□ -0.86
PDLIM5-219ENST00000514743 BLMP54132 1417 aaPredicted RBP9.69□□□□□ -0.86
PDLIM5-219ENST00000514743 CAMSAP1Q5T5Y3 1602 aa9.69□□□□□ -0.86
PDLIM5-219ENST00000514743 NLRP13Q86W25 1043 aa9.69□□□□□ -0.86
PDLIM5-219ENST00000514743 TMF1P82094 1093 aa9.68□□□□□ -0.86
PDLIM5-219ENST00000514743 PANK3Q9H999 370 aa9.68□□□□□ -0.86
PDLIM5-219ENST00000514743 IPO9Q96P70 1041 aaKnown RBP9.67□□□□□ -0.86
PDLIM5-219ENST00000514743 ZHX1Q9UKY1 873 aaPredicted RBP9.67□□□□□ -0.86
PDLIM5-219ENST00000514743 PIK3C2BO00750 1634 aa9.67□□□□□ -0.86
PDLIM5-219ENST00000514743 ZNF592Q92610 1267 aa9.67□□□□□ -0.86
PDLIM5-219ENST00000514743 PNNQ9H307 717 aaKnown RBP9.67□□□□□ -0.86
PDLIM5-219ENST00000514743 CD109Q6YHK3 1445 aa9.67□□□□□ -0.86
PDLIM5-219ENST00000514743 SETBP1Q9Y6X0 1596 aa9.67□□□□□ -0.86
PDLIM5-219ENST00000514743 INSRP06213 1382 aa9.67□□□□□ -0.86
PDLIM5-219ENST00000514743 PDCL3Q9H2J4 239 aa9.67□□□□□ -0.86
PDLIM5-219ENST00000514743 DIP2CQ9Y2E4 1556 aa9.66□□□□□ -0.86
PDLIM5-219ENST00000514743 RGS22Q8NE09 1264 aa9.66□□□□□ -0.86
PDLIM5-219ENST00000514743 TMEM51Q9NW97 253 aa9.66□□□□□ -0.86
PDLIM5-219ENST00000514743 ERVK-7P63135 1459 aa9.66□□□□□ -0.86
PDLIM5-219ENST00000514743 FAM193AP78312 1265 aa9.66□□□□□ -0.86
PDLIM5-219ENST00000514743 ABCC3O15438 1527 aa9.66□□□□□ -0.86
PDLIM5-219ENST00000514743 NPATQ14207 1427 aa9.66□□□□□ -0.86
PDLIM5-219ENST00000514743 IRX3P78415 501 aaPredicted RBP9.65□□□□□ -0.86
PDLIM5-219ENST00000514743 CC2D1BQ5T0F9 858 aaKnown RBP9.65□□□□□ -0.86
PDLIM5-219ENST00000514743 QRICH2Q9H0J4 1663 aa9.65□□□□□ -0.86
PDLIM5-219ENST00000514743 OSCARQ8IYS5 282 aa9.65□□□□□ -0.86
PDLIM5-219ENST00000514743 LAS1LQ9Y4W2 734 aaKnown RBP9.65□□□□□ -0.86
PDLIM5-219ENST00000514743 ASXL1Q8IXJ9 1541 aa9.65□□□□□ -0.87
PDLIM5-219ENST00000514743 ADGRF5Q8IZF2 1346 aa9.64□□□□□ -0.87
PDLIM5-219ENST00000514743 ADGRB1O14514 1584 aa9.64□□□□□ -0.87
PDLIM5-219ENST00000514743 NEO1Q92859 1461 aa9.64□□□□□ -0.87
PDLIM5-219ENST00000514743 RRAGDQ9NQL2 400 aaPredicted RBP9.63□□□□□ -0.87
PDLIM5-219ENST00000514743 MYO5BQ9ULV0 1848 aa9.63□□□□□ -0.87
PDLIM5-219ENST00000514743 ATF5Q9Y2D1 282 aaPredicted RBP9.63□□□□□ -0.87
PDLIM5-219ENST00000514743 PIK3C2GO75747 1445 aa9.63□□□□□ -0.87
PDLIM5-219ENST00000514743 GLI2P10070 1586 aa9.62□□□□□ -0.87
PDLIM5-219ENST00000514743 EIF3AQ14152 1382 aaKnown RBP9.62□□□□□ -0.87
PDLIM5-219ENST00000514743 ARHGEF28Q8N1W1 1705 aaKnown RBP9.62□□□□□ -0.87
PDLIM5-219ENST00000514743 NOS1P29475 1434 aa9.62□□□□□ -0.87
PDLIM5-219ENST00000514743 PTMAP06454 111 aaKnown RBP9.62□□□□□ -0.87
PDLIM5-219ENST00000514743 CFAP70Q5T0N1 1121 aa9.62□□□□□ -0.87
PDLIM5-219ENST00000514743 FAM43BQ6ZT52 329 aaPredicted RBP9.61□□□□□ -0.87
PDLIM5-219ENST00000514743 NPC1L1Q9UHC9 1359 aa9.61□□□□□ -0.87
PDLIM5-219ENST00000514743 NEXMIFQ5QGS0 1516 aa9.6□□□□□ -0.87
PDLIM5-219ENST00000514743 ANP32BQ92688 251 aaKnown RBP9.6□□□□□ -0.87
PDLIM5-219ENST00000514743 PLCD4Q9BRC7 762 aa9.6□□□□□ -0.87
PDLIM5-219ENST00000514743 SBNO2Q9Y2G9 1366 aa9.6□□□□□ -0.87
PDLIM5-219ENST00000514743 APPP05067 770 aa9.6□□□□□ -0.87
PDLIM5-219ENST00000514743 FRAT1Q92837 279 aaPredicted RBP9.6□□□□□ -0.87
PDLIM5-219ENST00000514743 DDRGK1Q96HY6 314 aa9.6□□□□□ -0.87
PDLIM5-219ENST00000514743 NPM1P06748 294 aaKnown RBP eCLIP9.6□□□□□ -0.87
PDLIM5-219ENST00000514743 SHPRHQ149N8 1683 aa9.59□□□□□ -0.87
PDLIM5-219ENST00000514743 PPP2R1AP30153 589 aa9.59□□□□□ -0.87
PDLIM5-219ENST00000514743 HDAC5Q9UQL6 1122 aa9.59□□□□□ -0.87
PDLIM5-219ENST00000514743 PREX1Q8TCU6 1659 aa9.59□□□□□ -0.87
PDLIM5-219ENST00000514743 CLGNO14967 610 aa9.59□□□□□ -0.87
PDLIM5-219ENST00000514743 CLSTN1O94985 981 aa9.59□□□□□ -0.87
PDLIM5-219ENST00000514743 USP32Q8NFA0 1604 aa9.59□□□□□ -0.87
PDLIM5-219ENST00000514743 PDE3BQ13370 1112 aa9.58□□□□□ -0.88
PDLIM5-219ENST00000514743 CDCA8Q53HL2 280 aa9.58□□□□□ -0.88
PDLIM5-219ENST00000514743 CDCA7LQ96GN5 454 aa9.58□□□□□ -0.88
PDLIM5-219ENST00000514743 MYCNP04198 464 aaPredicted RBP9.57□□□□□ -0.88
PDLIM5-219ENST00000514743 HMGB1P09429 215 aaKnown RBP9.57□□□□□ -0.88
PDLIM5-219ENST00000514743 RRP1P56182 461 aaKnown RBP9.57□□□□□ -0.88
PDLIM5-219ENST00000514743 GRIPAP1Q4V328 841 aa9.57□□□□□ -0.88
PDLIM5-219ENST00000514743 SMAP1Q8IYB5 467 aaPredicted RBP9.57□□□□□ -0.88
PDLIM5-219ENST00000514743 E9PSI1 815 aa9.57□□□□□ -0.88
PDLIM5-219ENST00000514743 KNSTRNQ9Y448 316 aa9.57□□□□□ -0.88
PDLIM5-219ENST00000514743 PPP4R3BQ5MIZ7 849 aa9.57□□□□□ -0.88
PDLIM5-219ENST00000514743 ADAMTS8Q9UP79 889 aa9.57□□□□□ -0.88
PDLIM5-219ENST00000514743 SOX12O15370 315 aa9.56□□□□□ -0.88
PDLIM5-219ENST00000514743 RAPGEF3O95398 923 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms