RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 KIAA1468Q9P260 1216 aa9.26□□□□□ -0.93
RFC1-216ENST00000514572 KCTD17Q8N5Z5 321 aa9.25□□□□□ -0.93
RFC1-216ENST00000514572 HLA-CQ95604 372 aa9.25□□□□□ -0.93
RFC1-216ENST00000514572 GUCA2AQ02747 115 aa9.24□□□□□ -0.93
RFC1-216ENST00000514572 SWT1Q5T5J6 900 aaKnown RBP9.24□□□□□ -0.93
RFC1-216ENST00000514572 SLC4A5Q9BY07 1137 aa9.24□□□□□ -0.93
RFC1-216ENST00000514572 CTDSPL2Q05D32 466 aa9.23□□□□□ -0.93
RFC1-216ENST00000514572 RSPH4AQ5TD94 716 aa9.23□□□□□ -0.93
RFC1-216ENST00000514572 RABGEF1Q9UJ41 708 aa9.23□□□□□ -0.93
RFC1-216ENST00000514572 CCDC9Q9Y3X0 531 aaKnown RBP9.23□□□□□ -0.93
RFC1-216ENST00000514572 SRPK2P78362 688 aaKnown RBP9.22□□□□□ -0.93
RFC1-216ENST00000514572 MTMR2Q13614 643 aa9.22□□□□□ -0.93
RFC1-216ENST00000514572 CFAP99D6REC4 459 aa9.21□□□□□ -0.94
RFC1-216ENST00000514572 WASHC4Q2M389 1173 aa9.21□□□□□ -0.94
RFC1-216ENST00000514572 POTEEQ6S8J3 1075 aa9.21□□□□□ -0.94
RFC1-216ENST00000514572 CFAP70Q5T0N1 1121 aa9.2□□□□□ -0.94
RFC1-216ENST00000514572 PSEN2P49810 448 aa9.19□□□□□ -0.94
RFC1-216ENST00000514572 HDGFL1Q5TGJ6 251 aa9.19□□□□□ -0.94
RFC1-216ENST00000514572 ANKRD13DQ6ZTN6 518 aa9.19□□□□□ -0.94
RFC1-216ENST00000514572 HELBQ8NG08 1087 aaPredicted RBP9.19□□□□□ -0.94
RFC1-216ENST00000514572 LRRN4Q8WUT4 740 aa9.19□□□□□ -0.94
RFC1-216ENST00000514572 PBXIP1Q96AQ6 731 aa9.19□□□□□ -0.94
RFC1-216ENST00000514572 KCNH8Q96L42 1107 aa9.19□□□□□ -0.94
RFC1-216ENST00000514572 FAM98CQ17RN3 349 aaKnown RBP9.18□□□□□ -0.94
RFC1-216ENST00000514572 NPM2Q86SE8 214 aaKnown RBP9.18□□□□□ -0.94
RFC1-216ENST00000514572 ALG2Q9H553 416 aa9.18□□□□□ -0.94
RFC1-216ENST00000514572 SEPT9Q9UHD8 586 aaPredicted RBP9.18□□□□□ -0.94
RFC1-216ENST00000514572 AXIN2Q9Y2T1 843 aa9.18□□□□□ -0.94
RFC1-216ENST00000514572 LSM11P83369 360 aaKnown RBP eCLIP9.17□□□□□ -0.94
RFC1-216ENST00000514572 FUT2Q10981 343 aa9.17□□□□□ -0.94
RFC1-216ENST00000514572 PBX2P40425 430 aa9.16□□□□□ -0.94
RFC1-216ENST00000514572 RANGAP1P46060 587 aaPredicted RBP9.16□□□□□ -0.94
RFC1-216ENST00000514572 EPS8L1Q8TE68 723 aa9.16□□□□□ -0.94
RFC1-216ENST00000514572 ARHGAP33O14559 1287 aa9.15□□□□□ -0.94
RFC1-216ENST00000514572 SLF2Q8IX21 1173 aa9.15□□□□□ -0.94
RFC1-216ENST00000514572 PPP1R12CQ9BZL4 782 aa9.15□□□□□ -0.94
RFC1-216ENST00000514572 CFHP08603 1231 aa9.14□□□□□ -0.95
RFC1-216ENST00000514572 VAC14Q08AM6 782 aa9.14□□□□□ -0.95
RFC1-216ENST00000514572 DMRTA1Q5VZB9 504 aa9.14□□□□□ -0.95
RFC1-216ENST00000514572 UCN2Q96RP3 112 aa9.14□□□□□ -0.95
RFC1-216ENST00000514572 MYT1LQ9UL68 1186 aa9.14□□□□□ -0.95
RFC1-216ENST00000514572 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.13□□□□□ -0.95
RFC1-216ENST00000514572 GRIPAP1Q4V328 841 aa9.13□□□□□ -0.95
RFC1-216ENST00000514572 LAPTM4BQ86VI4 370 aa9.13□□□□□ -0.95
RFC1-216ENST00000514572 AEBP1Q8IUX7 1158 aa9.13□□□□□ -0.95
RFC1-216ENST00000514572 RNF166Q96A37 237 aaPredicted RBP9.13□□□□□ -0.95
RFC1-216ENST00000514572 VPS9D1Q9Y2B5 631 aa9.13□□□□□ -0.95
RFC1-216ENST00000514572 USTQ9Y2C2 406 aa9.13□□□□□ -0.95
RFC1-216ENST00000514572 C6orf229H3BNL8 230 aa9.12□□□□□ -0.95
RFC1-216ENST00000514572 ATP6V1AP38606 617 aa9.12□□□□□ -0.95
RFC1-216ENST00000514572 PDE4CQ08493 712 aa9.12□□□□□ -0.95
RFC1-216ENST00000514572 SAMD7Q7Z3H4 446 aa9.12□□□□□ -0.95
RFC1-216ENST00000514572 ACIN1Q9UKV3 1341 aaKnown RBP9.11□□□□□ -0.95
RFC1-216ENST00000514572 PER1O15534 1290 aaPredicted RBP9.11□□□□□ -0.95
RFC1-216ENST00000514572 SOX11P35716 441 aa9.11□□□□□ -0.95
RFC1-216ENST00000514572 DESI1Q6ICB0 168 aa9.11□□□□□ -0.95
RFC1-216ENST00000514572 PRR7Q8TB68 274 aa9.11□□□□□ -0.95
RFC1-216ENST00000514572 PALM3A6NDB9 673 aaPredicted RBP9.1□□□□□ -0.95
RFC1-216ENST00000514572 BHMG1C9JSJ3 638 aaPredicted RBP9.1□□□□□ -0.95
RFC1-216ENST00000514572 RETREG3Q86VR2 466 aa9.1□□□□□ -0.95
RFC1-216ENST00000514572 SYMPKQ92797 1274 aaKnown RBP9.1□□□□□ -0.95
RFC1-216ENST00000514572 SLC4A3P48751 1232 aa9.09□□□□□ -0.95
RFC1-216ENST00000514572 HDGFP51858 240 aaKnown RBP9.09□□□□□ -0.95
RFC1-216ENST00000514572 MORN1Q5T089 497 aa9.09□□□□□ -0.95
RFC1-216ENST00000514572 TSC1Q92574 1164 aa9.09□□□□□ -0.95
RFC1-216ENST00000514572 NR6A1Q15406 480 aa9.08□□□□□ -0.96
RFC1-216ENST00000514572 ACTN4O43707 911 aaKnown RBP9.06□□□□□ -0.96
RFC1-216ENST00000514572 BRD1O95696 1058 aa9.06□□□□□ -0.96
RFC1-216ENST00000514572 RFX1P22670 979 aa9.06□□□□□ -0.96
RFC1-216ENST00000514572 RGS22Q8NE09 1264 aa9.06□□□□□ -0.96
RFC1-216ENST00000514572 NBPF3Q9H094 633 aa9.06□□□□□ -0.96
RFC1-216ENST00000514572 PATL2C9JE40 543 aaKnown RBP9.05□□□□□ -0.96
RFC1-216ENST00000514572 ATG7O95352 703 aa9.05□□□□□ -0.96
RFC1-216ENST00000514572 KCNA1Q09470 495 aa9.05□□□□□ -0.96
RFC1-216ENST00000514572 KMT5BQ4FZB7 885 aa9.05□□□□□ -0.96
RFC1-216ENST00000514572 ADGRD1Q6QNK2 874 aa9.05□□□□□ -0.96
RFC1-216ENST00000514572 LYPD8Q6UX82 237 aa9.05□□□□□ -0.96
RFC1-216ENST00000514572 ZFRQ96KR1 1074 aaKnown RBP9.05□□□□□ -0.96
RFC1-216ENST00000514572 TFIP11Q9UBB9 837 aaKnown RBP9.05□□□□□ -0.96
RFC1-216ENST00000514572 SLC27A5Q9Y2P5 690 aa9.05□□□□□ -0.96
RFC1-216ENST00000514572 MAFBQ9Y5Q3 323 aaPredicted RBP9.05□□□□□ -0.96
RFC1-216ENST00000514572 TMCO4Q5TGY1 634 aa9.04□□□□□ -0.96
RFC1-216ENST00000514572 GZF1Q9H116 711 aaPredicted RBP9.04□□□□□ -0.96
RFC1-216ENST00000514572 TMEM88BA6NKF7 163 aa9.03□□□□□ -0.96
RFC1-216ENST00000514572 TK2O00142 265 aa9.03□□□□□ -0.96
RFC1-216ENST00000514572 CSB-PGBD3P0DP91 1061 aa9.03□□□□□ -0.96
RFC1-216ENST00000514572 LMOD1P29536 600 aaPredicted RBP9.03□□□□□ -0.96
RFC1-216ENST00000514572 Q3C1V9 767 aa9.03□□□□□ -0.96
RFC1-216ENST00000514572 SALL2Q9Y467 1007 aaPredicted RBP9.02□□□□□ -0.97
RFC1-216ENST00000514572 F12P00748 615 aaPredicted RBP9.01□□□□□ -0.97
RFC1-216ENST00000514572 NR1H3Q13133 447 aa9.01□□□□□ -0.97
RFC1-216ENST00000514572 PUS10Q3MIT2 529 aaKnown RBP9.01□□□□□ -0.97
RFC1-216ENST00000514572 RNF19BQ6ZMZ0 732 aa9.01□□□□□ -0.97
RFC1-216ENST00000514572 TBC1D9Q6ZT07 1266 aa9.01□□□□□ -0.97
RFC1-216ENST00000514572 ATP9BO43861 1147 aa9□□□□□ -0.97
RFC1-216ENST00000514572 RNF40O75150 1001 aa9□□□□□ -0.97
RFC1-216ENST00000514572 MFAP1P55081 439 aaKnown RBP9□□□□□ -0.97
RFC1-216ENST00000514572 SEMA3FQ13275 785 aa9□□□□□ -0.97
RFC1-216ENST00000514572 BLOC1S3Q6QNY0 202 aa9□□□□□ -0.97
RFC1-216ENST00000514572 CARNS1A5YM72 827 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms