RNA–Protein interactions for RNA: ENST00000514149.1

KLHL3-213, Transcript of kelch like family member 3, humanhuman

TSL 4

Gene KLHL3, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-213ENST00000514149 MSS51Q4VC12 460 aa11.35□□□□□ -0.59
KLHL3-213ENST00000514149 CCDC180Q9P1Z9 1646 aa11.32□□□□□ -0.6
KLHL3-213ENST00000514149 TTC24A2A3L6 582 aaPredicted RBP11.32□□□□□ -0.6
KLHL3-213ENST00000514149 SMPD1P17405 629 aa11.32□□□□□ -0.6
KLHL3-213ENST00000514149 LCE2CQ5TA81 110 aa11.31□□□□□ -0.6
KLHL3-213ENST00000514149 SULF1Q8IWU6 871 aa11.31□□□□□ -0.6
KLHL3-213ENST00000514149 WNT7AO00755 349 aa11.3□□□□□ -0.6
KLHL3-213ENST00000514149 ZBTB24O43167 697 aaPredicted RBP11.3□□□□□ -0.6
KLHL3-213ENST00000514149 TRIM32Q13049 653 aa11.28□□□□□ -0.6
KLHL3-213ENST00000514149 ATP13A2Q9NQ11 1180 aa11.28□□□□□ -0.6
KLHL3-213ENST00000514149 J3QL48 77 aa11.27□□□□□ -0.61
KLHL3-213ENST00000514149 WIPF1O43516 503 aa11.27□□□□□ -0.61
KLHL3-213ENST00000514149 SNIP1Q8TAD8 396 aaKnown RBP11.27□□□□□ -0.61
KLHL3-213ENST00000514149 SNRPBP14678 240 aaKnown RBP11.26□□□□□ -0.61
KLHL3-213ENST00000514149 MMP16P51512 607 aa11.26□□□□□ -0.61
KLHL3-213ENST00000514149 MRGPRX2Q96LB1 330 aa11.26□□□□□ -0.61
KLHL3-213ENST00000514149 SMYD5Q6GMV2 418 aa11.25□□□□□ -0.61
KLHL3-213ENST00000514149 STK17AQ9UEE5 414 aa11.23□□□□□ -0.61
KLHL3-213ENST00000514149 GRIPAP1Q4V328 841 aa11.22□□□□□ -0.61
KLHL3-213ENST00000514149 HPS1Q92902 700 aa11.22□□□□□ -0.61
KLHL3-213ENST00000514149 TRIM47Q96LD4 638 aa11.22□□□□□ -0.61
KLHL3-213ENST00000514149 DXOO77932 396 aaKnown RBP11.21□□□□□ -0.61
KLHL3-213ENST00000514149 CD46P15529 392 aa11.21□□□□□ -0.61
KLHL3-213ENST00000514149 Q3C1V9 767 aa11.21□□□□□ -0.61
KLHL3-213ENST00000514149 INSM1Q01101 510 aaPredicted RBP11.2□□□□□ -0.62
KLHL3-213ENST00000514149 TERTO14746 1132 aaKnown RBP11.19□□□□□ -0.62
KLHL3-213ENST00000514149 HLA-CQ95604 372 aa11.19□□□□□ -0.62
KLHL3-213ENST00000514149 SKOR1P84550 965 aa11.18□□□□□ -0.62
KLHL3-213ENST00000514149 USB1Q9BQ65 265 aaKnown RBP11.18□□□□□ -0.62
KLHL3-213ENST00000514149 GPIHBP1Q8IV16 184 aa11.17□□□□□ -0.62
KLHL3-213ENST00000514149 SENP2Q9HC62 589 aa11.17□□□□□ -0.62
KLHL3-213ENST00000514149 REPIN1Q9BWE0 567 aaKnown RBP11.16□□□□□ -0.62
KLHL3-213ENST00000514149 KDM4AO75164 1064 aa11.15□□□□□ -0.62
KLHL3-213ENST00000514149 RC3H1Q5TC82 1133 aaKnown RBP11.15□□□□□ -0.62
KLHL3-213ENST00000514149 CCDC24Q8N4L8 307 aa11.13□□□□□ -0.63
KLHL3-213ENST00000514149 WNT7BP56706 349 aa11.11□□□□□ -0.63
KLHL3-213ENST00000514149 KIFC2Q96AC6 838 aa11.11□□□□□ -0.63
KLHL3-213ENST00000514149 HOXA2O43364 376 aa11.1□□□□□ -0.63
KLHL3-213ENST00000514149 GUCA2AQ02747 115 aa11.1□□□□□ -0.63
KLHL3-213ENST00000514149 USP46P62068 366 aa11.08□□□□□ -0.64
KLHL3-213ENST00000514149 MAP2K5Q13163 448 aa11.08□□□□□ -0.64
KLHL3-213ENST00000514149 ALDH1A1P00352 501 aa11.07□□□□□ -0.64
KLHL3-213ENST00000514149 JUNDP17535 347 aa11.07□□□□□ -0.64
KLHL3-213ENST00000514149 MDM2Q00987 491 aaPredicted RBP11.07□□□□□ -0.64
KLHL3-213ENST00000514149 RB1CC1Q8TDY2 1594 aa11.07□□□□□ -0.64
KLHL3-213ENST00000514149 SYMPKQ92797 1274 aaKnown RBP11.06□□□□□ -0.64
KLHL3-213ENST00000514149 SIAH2O43255 324 aa11.05□□□□□ -0.64
KLHL3-213ENST00000514149 PTCRAQ6ISU1 281 aaPredicted RBP11.05□□□□□ -0.64
KLHL3-213ENST00000514149 BMP1P13497 986 aa11.04□□□□□ -0.64
KLHL3-213ENST00000514149 TRIM46Q7Z4K8 759 aa11.04□□□□□ -0.64
KLHL3-213ENST00000514149 IRF6O14896 467 aa11.03□□□□□ -0.64
KLHL3-213ENST00000514149 LORP23490 312 aaPredicted RBP11.03□□□□□ -0.64
KLHL3-213ENST00000514149 NXF1Q9UBU9 619 aaKnown RBP11.02□□□□□ -0.65
KLHL3-213ENST00000514149 NUDT12Q9BQG2 462 aa11.01□□□□□ -0.65
KLHL3-213ENST00000514149 GMPRP36959 345 aa11□□□□□ -0.65
KLHL3-213ENST00000514149 SLC16A10Q8TF71 515 aa11□□□□□ -0.65
KLHL3-213ENST00000514149 EHBP1Q8NDI1 1231 aa10.99□□□□□ -0.65
KLHL3-213ENST00000514149 CAPN5O15484 640 aaPredicted RBP10.98□□□□□ -0.65
KLHL3-213ENST00000514149 PLCB2Q00722 1185 aa10.98□□□□□ -0.65
KLHL3-213ENST00000514149 RETREG3Q86VR2 466 aa10.98□□□□□ -0.65
KLHL3-213ENST00000514149 VEGFBP49765 207 aa10.97□□□□□ -0.65
KLHL3-213ENST00000514149 SH3BP2P78314 561 aa10.97□□□□□ -0.65
KLHL3-213ENST00000514149 CCDC102AQ96A19 550 aa10.97□□□□□ -0.65
KLHL3-213ENST00000514149 FAM217BQ9NTX9 383 aaPredicted RBP10.97□□□□□ -0.65
KLHL3-213ENST00000514149 MINK1Q8N4C8 1332 aaPredicted RBP10.96□□□□□ -0.65
KLHL3-213ENST00000514149 FAM181BA6NEQ2 426 aa10.96□□□□□ -0.65
KLHL3-213ENST00000514149 WASF2Q9Y6W5 498 aa10.96□□□□□ -0.65
KLHL3-213ENST00000514149 GPCPD1Q9NPB8 672 aa10.95□□□□□ -0.66
KLHL3-213ENST00000514149 PCDHGC3Q9UN70 934 aa10.95□□□□□ -0.66
KLHL3-213ENST00000514149 ERBB4Q15303 1308 aa10.94□□□□□ -0.66
KLHL3-213ENST00000514149 NPAS3Q8IXF0 933 aa10.94□□□□□ -0.66
KLHL3-213ENST00000514149 H3BM21 787 aa10.93□□□□□ -0.66
KLHL3-213ENST00000514149 ZSCAN1Q8NBB4 408 aa10.93□□□□□ -0.66
KLHL3-213ENST00000514149 IRF7Q92985 503 aa10.93□□□□□ -0.66
KLHL3-213ENST00000514149 TLL2Q9Y6L7 1015 aa10.92□□□□□ -0.66
KLHL3-213ENST00000514149 CCNYL3P0C7X3 344 aa10.91□□□□□ -0.66
KLHL3-213ENST00000514149 FDX1P10109 184 aa10.91□□□□□ -0.66
KLHL3-213ENST00000514149 CLCN1P35523 988 aa10.91□□□□□ -0.66
KLHL3-213ENST00000514149 NUTM1Q86Y26 1132 aa10.91□□□□□ -0.66
KLHL3-213ENST00000514149 ZFP42Q96MM3 310 aa10.91□□□□□ -0.66
KLHL3-213ENST00000514149 MS4A1P11836 297 aa10.9□□□□□ -0.66
KLHL3-213ENST00000514149 UNC93B1Q9H1C4 597 aa10.9□□□□□ -0.66
KLHL3-213ENST00000514149 C6orf229H3BNL8 230 aa10.89□□□□□ -0.67
KLHL3-213ENST00000514149 LINC01559Q495D7 138 aa10.89□□□□□ -0.67
KLHL3-213ENST00000514149 KDM2AQ9Y2K7 1162 aa10.88□□□□□ -0.67
KLHL3-213ENST00000514149 NACADO15069 1562 aa10.87□□□□□ -0.67
KLHL3-213ENST00000514149 PTPRNQ16849 979 aa10.87□□□□□ -0.67
KLHL3-213ENST00000514149 BAP1Q92560 729 aa10.87□□□□□ -0.67
KLHL3-213ENST00000514149 EVA1BQ9NVM1 165 aa10.87□□□□□ -0.67
KLHL3-213ENST00000514149 NNTQ13423 1086 aa10.85□□□□□ -0.67
KLHL3-213ENST00000514149 KCNH2Q12809 1159 aa10.84□□□□□ -0.67
KLHL3-213ENST00000514149 ZNF511Q8NB15 262 aa10.84□□□□□ -0.67
KLHL3-213ENST00000514149 TIMP2P16035 220 aa10.83□□□□□ -0.68
KLHL3-213ENST00000514149 NDUFV2P19404 249 aa10.83□□□□□ -0.68
KLHL3-213ENST00000514149 MRPL14Q6P1L8 145 aaKnown RBP10.83□□□□□ -0.68
KLHL3-213ENST00000514149 SPIRE2Q8WWL2 714 aa10.83□□□□□ -0.68
KLHL3-213ENST00000514149 SOBPA7XYQ1 873 aa10.82□□□□□ -0.68
KLHL3-213ENST00000514149 MPNDQ8N594 471 aa10.82□□□□□ -0.68
KLHL3-213ENST00000514149 VARSP26640 1264 aaKnown RBP10.81□□□□□ -0.68
KLHL3-213ENST00000514149 PRR7Q8TB68 274 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms