RNA–Protein interactions for RNA: ENST00000513816.1

RAPGEF2-212, Transcript of Rap guanine nucleotide exchange factor 2, humanhuman

TSL 1 (best)

Gene RAPGEF2, Length 3,670 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF2-212ENST00000513816 STK26Q9P289 416 aa10.15□□□□□ -0.78
RAPGEF2-212ENST00000513816 ROCK2O75116 1388 aaKnown RBP10.15□□□□□ -0.78
RAPGEF2-212ENST00000513816 ARHGEF28Q8N1W1 1705 aaKnown RBP10.15□□□□□ -0.78
RAPGEF2-212ENST00000513816 TMEM132EQ6IEE7 984 aa10.15□□□□□ -0.78
RAPGEF2-212ENST00000513816 MST1RQ04912 1400 aa10.14□□□□□ -0.79
RAPGEF2-212ENST00000513816 ILDR1Q86SU0 546 aaPredicted RBP10.14□□□□□ -0.79
RAPGEF2-212ENST00000513816 KIF1AQ12756 1690 aa10.14□□□□□ -0.79
RAPGEF2-212ENST00000513816 AHDC1Q5TGY3 1603 aaPredicted RBP10.14□□□□□ -0.79
RAPGEF2-212ENST00000513816 FMN2Q9NZ56 1722 aa10.13□□□□□ -0.79
RAPGEF2-212ENST00000513816 SENP3Q9H4L4 574 aaPredicted RBP10.13□□□□□ -0.79
RAPGEF2-212ENST00000513816 PRAM1Q96QH2 718 aa10.13□□□□□ -0.79
RAPGEF2-212ENST00000513816 SCAF1Q9H7N4 1312 aaKnown RBP10.13□□□□□ -0.79
RAPGEF2-212ENST00000513816 SBNO2Q9Y2G9 1366 aa10.13□□□□□ -0.79
RAPGEF2-212ENST00000513816 CENPJQ9HC77 1338 aaPredicted RBP10.13□□□□□ -0.79
RAPGEF2-212ENST00000513816 ROBO1Q9Y6N7 1651 aa10.12□□□□□ -0.79
RAPGEF2-212ENST00000513816 C1orf167Q5SNV9 1468 aa10.12□□□□□ -0.79
RAPGEF2-212ENST00000513816 TRAK1Q9UPV9 953 aa10.12□□□□□ -0.79
RAPGEF2-212ENST00000513816 KCNA4P22459 653 aa10.12□□□□□ -0.79
RAPGEF2-212ENST00000513816 PIP4K2BP78356 416 aa10.11□□□□□ -0.79
RAPGEF2-212ENST00000513816 ITSN1Q15811 1721 aa10.11□□□□□ -0.79
RAPGEF2-212ENST00000513816 TULP4Q9NRJ4 1543 aa10.11□□□□□ -0.79
RAPGEF2-212ENST00000513816 PUS7Q96PZ0 661 aaKnown RBP10.1□□□□□ -0.79
RAPGEF2-212ENST00000513816 CARD11Q9BXL7 1154 aa10.1□□□□□ -0.79
RAPGEF2-212ENST00000513816 NHSL1Q5SYE7 1610 aa10.1□□□□□ -0.79
RAPGEF2-212ENST00000513816 WAPLQ7Z5K2 1190 aa10.1□□□□□ -0.79
RAPGEF2-212ENST00000513816 NPHP3Q7Z494 1330 aa10.1□□□□□ -0.79
RAPGEF2-212ENST00000513816 BRD4O60885 1362 aaPredicted RBP10.1□□□□□ -0.79
RAPGEF2-212ENST00000513816 WASLO00401 505 aaPredicted RBP10.09□□□□□ -0.79
RAPGEF2-212ENST00000513816 PHLPP1O60346 1717 aa10.09□□□□□ -0.79
RAPGEF2-212ENST00000513816 PLEKHH1Q9ULM0 1364 aa10.09□□□□□ -0.79
RAPGEF2-212ENST00000513816 QRICH2Q9H0J4 1663 aa10.08□□□□□ -0.8
RAPGEF2-212ENST00000513816 EVC2Q86UK5 1308 aa10.08□□□□□ -0.8
RAPGEF2-212ENST00000513816 NBPF1Q3BBV0 1214 aa10.08□□□□□ -0.8
RAPGEF2-212ENST00000513816 BRINP3Q76B58 766 aa10.08□□□□□ -0.8
RAPGEF2-212ENST00000513816 JCADQ9P266 1359 aa10.08□□□□□ -0.8
RAPGEF2-212ENST00000513816 NBPF8Q3BBV2 869 aa10.08□□□□□ -0.8
RAPGEF2-212ENST00000513816 PSME1Q06323 249 aa10.07□□□□□ -0.8
RAPGEF2-212ENST00000513816 RBM33Q96EV2 1170 aaKnown RBP10.07□□□□□ -0.8
RAPGEF2-212ENST00000513816 CDCA8Q53HL2 280 aa10.06□□□□□ -0.8
RAPGEF2-212ENST00000513816 LRRC59Q96AG4 307 aaKnown RBP10.06□□□□□ -0.8
RAPGEF2-212ENST00000513816 ATAD2Q6PL18 1390 aa10.06□□□□□ -0.8
RAPGEF2-212ENST00000513816 COL16A1Q07092 1604 aaPredicted RBP10.06□□□□□ -0.8
RAPGEF2-212ENST00000513816 SPATA31A6Q5VVP1 1343 aa10.06□□□□□ -0.8
RAPGEF2-212ENST00000513816 MINK1Q8N4C8 1332 aaPredicted RBP10.06□□□□□ -0.8
RAPGEF2-212ENST00000513816 HSPA1LP34931 641 aa10.05□□□□□ -0.8
RAPGEF2-212ENST00000513816 PHF8Q9UPP1 1060 aa10.05□□□□□ -0.8
RAPGEF2-212ENST00000513816 SHPRHQ149N8 1683 aa10.05□□□□□ -0.8
RAPGEF2-212ENST00000513816 NINLQ9Y2I6 1382 aa10.05□□□□□ -0.8
RAPGEF2-212ENST00000513816 ESCO1Q5FWF5 840 aa10.05□□□□□ -0.8
RAPGEF2-212ENST00000513816 SOS2Q07890 1332 aaPredicted RBP10.04□□□□□ -0.8
RAPGEF2-212ENST00000513816 SBNO1A3KN83 1393 aa10.04□□□□□ -0.8
RAPGEF2-212ENST00000513816 CCDC61Q9Y6R9 512 aa10.04□□□□□ -0.8
RAPGEF2-212ENST00000513816 SAFB2Q14151 953 aaKnown RBP eCLIP10.03□□□□□ -0.8
RAPGEF2-212ENST00000513816 CDK19Q9BWU1 502 aa10.03□□□□□ -0.8
RAPGEF2-212ENST00000513816 ATP7BP35670 1465 aa10.03□□□□□ -0.8
RAPGEF2-212ENST00000513816 TOPAZ1Q8N9V7 1692 aa10.03□□□□□ -0.8
RAPGEF2-212ENST00000513816 ARHGEF10O15013 1369 aa10.02□□□□□ -0.8
RAPGEF2-212ENST00000513816 PLEKHG3A1L390 1219 aa10.02□□□□□ -0.8
RAPGEF2-212ENST00000513816 NUDT16Q96DE0 195 aaKnown RBP10.02□□□□□ -0.8
RAPGEF2-212ENST00000513816 USP47Q96K76 1375 aa10.02□□□□□ -0.81
RAPGEF2-212ENST00000513816 SRPK2P78362 688 aaKnown RBP10.02□□□□□ -0.81
RAPGEF2-212ENST00000513816 USP32Q8NFA0 1604 aa10.01□□□□□ -0.81
RAPGEF2-212ENST00000513816 TMF1P82094 1093 aa10.01□□□□□ -0.81
RAPGEF2-212ENST00000513816 PXDNQ92626 1479 aa10.01□□□□□ -0.81
RAPGEF2-212ENST00000513816 COL22A1Q8NFW1 1626 aaPredicted RBP10.01□□□□□ -0.81
RAPGEF2-212ENST00000513816 ZNF692Q9BU19 519 aaPredicted RBP10.01□□□□□ -0.81
RAPGEF2-212ENST00000513816 POLR3AO14802 1390 aaPredicted RBP10.01□□□□□ -0.81
RAPGEF2-212ENST00000513816 ORAI2Q96SN7 254 aa10□□□□□ -0.81
RAPGEF2-212ENST00000513816 EIF4G2P78344 907 aaKnown RBP eCLIP10□□□□□ -0.81
RAPGEF2-212ENST00000513816 NGDNQ8NEJ9 315 aaKnown RBP10□□□□□ -0.81
RAPGEF2-212ENST00000513816 TNS3Q68CZ2 1445 aa9.99□□□□□ -0.81
RAPGEF2-212ENST00000513816 KRT28Q7Z3Y7 464 aa9.99□□□□□ -0.81
RAPGEF2-212ENST00000513816 HIRIP3Q9BW71 556 aaPredicted RBP9.99□□□□□ -0.81
RAPGEF2-212ENST00000513816 ZEB1P37275 1124 aaPredicted RBP9.99□□□□□ -0.81
RAPGEF2-212ENST00000513816 PNPLA6Q8IY17 1366 aa9.98□□□□□ -0.81
RAPGEF2-212ENST00000513816 PPIP5K1Q6PFW1 1433 aa9.98□□□□□ -0.81
RAPGEF2-212ENST00000513816 SPATA31A3Q5VYP0 1347 aa9.98□□□□□ -0.81
RAPGEF2-212ENST00000513816 PRR36Q9H6K5 1346 aa9.98□□□□□ -0.81
RAPGEF2-212ENST00000513816 RGPD8O14715 1765 aaPredicted RBP9.98□□□□□ -0.81
RAPGEF2-212ENST00000513816 FOXO3O43524 673 aa9.97□□□□□ -0.81
RAPGEF2-212ENST00000513816 MED1Q15648 1581 aaPredicted RBP9.97□□□□□ -0.81
RAPGEF2-212ENST00000513816 TERF2IPQ9NYB0 399 aa9.97□□□□□ -0.81
RAPGEF2-212ENST00000513816 ST20-MTHFSA0A0A6YYL1 179 aa9.96□□□□□ -0.81
RAPGEF2-212ENST00000513816 HDGFL2Q7Z4V5 671 aaPredicted RBP9.96□□□□□ -0.81
RAPGEF2-212ENST00000513816 TTC21AQ8NDW8 1320 aa9.96□□□□□ -0.81
RAPGEF2-212ENST00000513816 TRPM3Q9HCF6 1732 aaPredicted RBP9.95□□□□□ -0.82
RAPGEF2-212ENST00000513816 NUTM2FA1L443 756 aa9.95□□□□□ -0.82
RAPGEF2-212ENST00000513816 TESK2Q96S53 571 aa9.95□□□□□ -0.82
RAPGEF2-212ENST00000513816 ACEP12821 1306 aa9.95□□□□□ -0.82
RAPGEF2-212ENST00000513816 AKAP12Q02952 1782 aa9.94□□□□□ -0.82
RAPGEF2-212ENST00000513816 CABP2Q9NPB3 220 aa9.94□□□□□ -0.82
RAPGEF2-212ENST00000513816 ALS2Q96Q42 1657 aa9.94□□□□□ -0.82
RAPGEF2-212ENST00000513816 RTN4Q9NQC3 1192 aaKnown RBP9.94□□□□□ -0.82
RAPGEF2-212ENST00000513816 MEX3CQ5U5Q3 659 aaKnown RBP9.94□□□□□ -0.82
RAPGEF2-212ENST00000513816 PMFBP1Q8TBY8 1022 aa9.94□□□□□ -0.82
RAPGEF2-212ENST00000513816 USP6P35125 1406 aa9.93□□□□□ -0.82
RAPGEF2-212ENST00000513816 CPSF1Q10570 1443 aaKnown RBP9.93□□□□□ -0.82
RAPGEF2-212ENST00000513816 ZNF772Q68DY9 489 aaPredicted RBP9.92□□□□□ -0.82
RAPGEF2-212ENST00000513816 NLRP13Q86W25 1043 aa9.92□□□□□ -0.82
RAPGEF2-212ENST00000513816 CABP1Q9NZU7 370 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms