RNA–Protein interactions for RNA: ENST00000513266.5

PTPN20-228, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 818 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-228ENST00000513266 METP08581 1390 aa15.29■□□□□ 0.04
PTPN20-228ENST00000513266 TNS1Q9HBL0 1735 aaKnown RBP15.28■□□□□ 0.04
PTPN20-228ENST00000513266 E9PCH4 1651 aa15.28■□□□□ 0.04
PTPN20-228ENST00000513266 PXDNQ92626 1479 aa15.27■□□□□ 0.04
PTPN20-228ENST00000513266 DAPK1P53355 1430 aa15.27■□□□□ 0.04
PTPN20-228ENST00000513266 SENP3-EIF4A1A0A087X0R7 540 aa15.27■□□□□ 0.04
PTPN20-228ENST00000513266 EN1Q05925 392 aaPredicted RBP15.27■□□□□ 0.04
PTPN20-228ENST00000513266 KRT27Q7Z3Y8 459 aa15.27■□□□□ 0.04
PTPN20-228ENST00000513266 CAMTA1Q9Y6Y1 1673 aa15.27■□□□□ 0.03
PTPN20-228ENST00000513266 IQGAP3Q86VI3 1631 aa15.26■□□□□ 0.03
PTPN20-228ENST00000513266 PLCH1Q4KWH8 1693 aa15.25■□□□□ 0.03
PTPN20-228ENST00000513266 ONECUT3O60422 494 aaPredicted RBP15.25■□□□□ 0.03
PTPN20-228ENST00000513266 USP32Q8NFA0 1604 aa15.25■□□□□ 0.03
PTPN20-228ENST00000513266 NWD2Q9ULI1 1742 aa15.24■□□□□ 0.03
PTPN20-228ENST00000513266 ANKRD30AQ9BXX3 1397 aa15.24■□□□□ 0.03
PTPN20-228ENST00000513266 DISP2A7MBM2 1401 aa15.22■□□□□ 0.03
PTPN20-228ENST00000513266 ZNF784Q8NCA9 323 aaPredicted RBP15.21■□□□□ 0.03
PTPN20-228ENST00000513266 CHIC2Q9UKJ5 165 aa15.21■□□□□ 0.03
PTPN20-228ENST00000513266 NPHP3Q7Z494 1330 aa15.2■□□□□ 0.02
PTPN20-228ENST00000513266 XPCQ01831 940 aaPredicted RBP15.2■□□□□ 0.02
PTPN20-228ENST00000513266 VPS72Q15906 364 aa15.2■□□□□ 0.02
PTPN20-228ENST00000513266 KANK4Q5T7N3 995 aaPredicted RBP15.2■□□□□ 0.02
PTPN20-228ENST00000513266 ADGRL2O95490 1459 aa15.19■□□□□ 0.02
PTPN20-228ENST00000513266 CHD4Q14839 1912 aa15.19■□□□□ 0.02
PTPN20-228ENST00000513266 RREB1Q92766 1687 aa15.17■□□□□ 0.02
PTPN20-228ENST00000513266 EZH2Q15910 746 aaKnown RBP15.17■□□□□ 0.02
PTPN20-228ENST00000513266 NUP188Q5SRE5 1749 aa15.17■□□□□ 0.02
PTPN20-228ENST00000513266 ROBO2Q9HCK4 1378 aa15.16■□□□□ 0.02
PTPN20-228ENST00000513266 C1QTNF8P60827 252 aa15.16■□□□□ 0.02
PTPN20-228ENST00000513266 ABCA3Q99758 1704 aa15.16■□□□□ 0.02
PTPN20-228ENST00000513266 NRAPQ86VF7 1730 aa15.15■□□□□ 0.02
PTPN20-228ENST00000513266 NINLQ9Y2I6 1382 aa15.15■□□□□ 0.02
PTPN20-228ENST00000513266 DCAF8L1A6NGE4 600 aa15.15■□□□□ 0.02
PTPN20-228ENST00000513266 FOXO3O43524 673 aa15.15■□□□□ 0.02
PTPN20-228ENST00000513266 ESCO1Q5FWF5 840 aa15.14■□□□□ 0.01
PTPN20-228ENST00000513266 FAM182BQ5T319 152 aa15.14■□□□□ 0.01
PTPN20-228ENST00000513266 CCDC9Q9Y3X0 531 aaKnown RBP15.14■□□□□ 0.01
PTPN20-228ENST00000513266 ANKRD50Q9ULJ7 1429 aa15.14■□□□□ 0.01
PTPN20-228ENST00000513266 CEP350Q5VT06 3117 aa15.13■□□□□ 0.01
PTPN20-228ENST00000513266 ADGRB2O60241 1585 aa15.13■□□□□ 0.01
PTPN20-228ENST00000513266 CDC42BPGQ6DT37 1551 aa15.13■□□□□ 0.01
PTPN20-228ENST00000513266 CAMKK2Q96RR4 588 aa15.13■□□□□ 0.01
PTPN20-228ENST00000513266 A0A0G2JS52 829 aa15.12■□□□□ 0.01
PTPN20-228ENST00000513266 MYT1Q01538 1121 aa15.12■□□□□ 0.01
PTPN20-228ENST00000513266 NEXMIFQ5QGS0 1516 aa15.11■□□□□ 0.01
PTPN20-228ENST00000513266 SPATA31A3Q5VYP0 1347 aa15.11■□□□□ 0.01
PTPN20-228ENST00000513266 PRAG1Q86YV5 1406 aa15.1■□□□□ 0.01
PTPN20-228ENST00000513266 THSD7AQ9UPZ6 1657 aa15.1■□□□□ 0.01
PTPN20-228ENST00000513266 FAM98CQ17RN3 349 aaKnown RBP15.1■□□□□ 0.01
PTPN20-228ENST00000513266 PPP1R1BQ9UD71 204 aaPredicted RBP15.1■□□□□ 0.01
PTPN20-228ENST00000513266 UTRNP46939 3433 aa15.1■□□□□ 0.01
PTPN20-228ENST00000513266 SPON1Q9HCB6 807 aa15.08■□□□□ 0
PTPN20-228ENST00000513266 LRPPRCP42704 1394 aaKnown RBP15.08■□□□□ 0
PTPN20-228ENST00000513266 CABLES1Q8TDN4 633 aa15.07■□□□□ 0
PTPN20-228ENST00000513266 PARD3Q8TEW0 1356 aa15.07■□□□□ 0
PTPN20-228ENST00000513266 HFM1A2PYH4 1435 aa15.07■□□□□ 0
PTPN20-228ENST00000513266 KIF1AQ12756 1690 aa15.06■□□□□ 0
PTPN20-228ENST00000513266 KCNQ2O43526 872 aa15.06■□□□□ 0
PTPN20-228ENST00000513266 ZNF326Q5BKZ1 582 aaKnown RBP15.06■□□□□ 0
PTPN20-228ENST00000513266 VPS8Q8N3P4 1428 aa15.05■□□□□ -0
PTPN20-228ENST00000513266 RGPD8O14715 1765 aaPredicted RBP15.05■□□□□ -0
PTPN20-228ENST00000513266 TRIM37O94972 964 aa15.04■□□□□ -0
PTPN20-228ENST00000513266 FMN2Q9NZ56 1722 aa15.03■□□□□ -0
PTPN20-228ENST00000513266 NRKQ7Z2Y5 1582 aa15.03■□□□□ -0
PTPN20-228ENST00000513266 CCDC144AA2RUR9 1427 aa15.03■□□□□ -0
PTPN20-228ENST00000513266 FAM83GA6ND36 823 aa15.03■□□□□ -0
PTPN20-228ENST00000513266 HAP1P54257 671 aaPredicted RBP15.03■□□□□ -0
PTPN20-228ENST00000513266 CASZ1Q86V15 1759 aa15.03■□□□□ -0
PTPN20-228ENST00000513266 TNS3Q68CZ2 1445 aa15.02■□□□□ -0
PTPN20-228ENST00000513266 NUTM2FA1L443 756 aa15.02■□□□□ -0
PTPN20-228ENST00000513266 MYOM1P52179 1685 aa15.02□□□□□ -0.01
PTPN20-228ENST00000513266 KIF1BO60333 1816 aa15.01□□□□□ -0.01
PTPN20-228ENST00000513266 PLEKHG5O94827 1062 aa15.01□□□□□ -0.01
PTPN20-228ENST00000513266 APBA3O96018 575 aa15.01□□□□□ -0.01
PTPN20-228ENST00000513266 CLTCL1P53675 1640 aa15.01□□□□□ -0.01
PTPN20-228ENST00000513266 NAIPQ13075 1403 aa15□□□□□ -0.01
PTPN20-228ENST00000513266 KRT28Q7Z3Y7 464 aa15□□□□□ -0.01
PTPN20-228ENST00000513266 COL14A1Q05707 1796 aaKnown RBP15□□□□□ -0.01
PTPN20-228ENST00000513266 NBPF8Q3BBV2 869 aa14.99□□□□□ -0.01
PTPN20-228ENST00000513266 NBPF14Q5TI25 921 aa14.99□□□□□ -0.01
PTPN20-228ENST00000513266 SPATA31A5Q5VU36 1347 aa14.97□□□□□ -0.01
PTPN20-228ENST00000513266 SPATA31A7Q8IWB4 1347 aa14.97□□□□□ -0.01
PTPN20-228ENST00000513266 FAM196AQ6ZSG2 479 aa14.97□□□□□ -0.01
PTPN20-228ENST00000513266 BTG4Q9NY30 223 aa14.97□□□□□ -0.01
PTPN20-228ENST00000513266 IFT172Q9UG01 1749 aa14.95□□□□□ -0.02
PTPN20-228ENST00000513266 GIGYF1O75420 1035 aaPredicted RBP14.93□□□□□ -0.02
PTPN20-228ENST00000513266 SBNO1A3KN83 1393 aa14.93□□□□□ -0.02
PTPN20-228ENST00000513266 NUP155O75694 1391 aa14.93□□□□□ -0.02
PTPN20-228ENST00000513266 PPLO60437 1756 aa14.93□□□□□ -0.02
PTPN20-228ENST00000513266 CRYBG1Q9Y4K1 1723 aa14.92□□□□□ -0.02
PTPN20-228ENST00000513266 ARHGEF10O15013 1369 aa14.92□□□□□ -0.02
PTPN20-228ENST00000513266 RGPD3A6NKT7 1758 aaPredicted RBP14.92□□□□□ -0.02
PTPN20-228ENST00000513266 RGPD4Q7Z3J3 1758 aa14.92□□□□□ -0.02
PTPN20-228ENST00000513266 RRBP1Q9P2E9 1410 aaKnown RBP14.92□□□□□ -0.02
PTPN20-228ENST00000513266 LMOD2Q6P5Q4 547 aa14.91□□□□□ -0.02
PTPN20-228ENST00000513266 TRPM3Q9HCF6 1732 aaPredicted RBP14.91□□□□□ -0.02
PTPN20-228ENST00000513266 PTGER2P43116 358 aa14.9□□□□□ -0.02
PTPN20-228ENST00000513266 PSME1Q06323 249 aa14.9□□□□□ -0.02
PTPN20-228ENST00000513266 WAPLQ7Z5K2 1190 aa14.9□□□□□ -0.02
PTPN20-228ENST00000513266 PDGFDQ9GZP0 370 aaPredicted RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms