RNA–Protein interactions for RNA: ENST00000513263.1

SKP2-207, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2

Gene SKP2, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-207ENST00000513263 NPHP3Q7Z494 1330 aa16.35■□□□□ 0.21
SKP2-207ENST00000513263 LRPPRCP42704 1394 aaKnown RBP16.35■□□□□ 0.21
SKP2-207ENST00000513263 PIK3C2GO75747 1445 aa16.35■□□□□ 0.21
SKP2-207ENST00000513263 MYOM2P54296 1465 aa16.33■□□□□ 0.2
SKP2-207ENST00000513263 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.32■□□□□ 0.2
SKP2-207ENST00000513263 C8orf37Q96NL8 207 aa16.31■□□□□ 0.2
SKP2-207ENST00000513263 PXDNQ92626 1479 aa16.3■□□□□ 0.2
SKP2-207ENST00000513263 ABCC11Q96J66 1382 aa16.3■□□□□ 0.2
SKP2-207ENST00000513263 RBM6P78332 1123 aaKnown RBP16.3■□□□□ 0.2
SKP2-207ENST00000513263 NGLY1Q96IV0 654 aa16.3■□□□□ 0.2
SKP2-207ENST00000513263 MPHOSPH9Q99550 1183 aa16.3■□□□□ 0.2
SKP2-207ENST00000513263 EP400Q96L91 3159 aa16.29■□□□□ 0.2
SKP2-207ENST00000513263 NRXN1Q9ULB1 1477 aa16.29■□□□□ 0.2
SKP2-207ENST00000513263 RGS12O14924 1447 aa16.28■□□□□ 0.2
SKP2-207ENST00000513263 YTHDC2Q9H6S0 1430 aaKnown RBP16.28■□□□□ 0.2
SKP2-207ENST00000513263 ADGRF5Q8IZF2 1346 aa16.27■□□□□ 0.2
SKP2-207ENST00000513263 DDX17Q92841 729 aaKnown RBP16.26■□□□□ 0.19
SKP2-207ENST00000513263 UPF1Q92900 1129 aaKnown RBP eCLIP16.26■□□□□ 0.19
SKP2-207ENST00000513263 ORAI2Q96SN7 254 aa16.26■□□□□ 0.19
SKP2-207ENST00000513263 RGPD8O14715 1765 aaPredicted RBP16.26■□□□□ 0.19
SKP2-207ENST00000513263 DLC1Q96QB1 1528 aa16.25■□□□□ 0.19
SKP2-207ENST00000513263 FOXD1Q16676 465 aa16.25■□□□□ 0.19
SKP2-207ENST00000513263 RGL3Q3MIN7 710 aa16.25■□□□□ 0.19
SKP2-207ENST00000513263 ESCO1Q5FWF5 840 aa16.25■□□□□ 0.19
SKP2-207ENST00000513263 QTRT2Q9H974 415 aaKnown RBP16.25■□□□□ 0.19
SKP2-207ENST00000513263 ADGRB2O60241 1585 aa16.25■□□□□ 0.19
SKP2-207ENST00000513263 SIRT1Q96EB6 747 aa16.24■□□□□ 0.19
SKP2-207ENST00000513263 TRPC5Q9UL62 973 aaPredicted RBP16.24■□□□□ 0.19
SKP2-207ENST00000513263 ATAD2Q6PL18 1390 aa16.24■□□□□ 0.19
SKP2-207ENST00000513263 USP32Q8NFA0 1604 aa16.23■□□□□ 0.19
SKP2-207ENST00000513263 NWD2Q9ULI1 1742 aa16.23■□□□□ 0.19
SKP2-207ENST00000513263 ADAMTS2O95450 1211 aa16.23■□□□□ 0.19
SKP2-207ENST00000513263 DHX57Q6P158 1386 aaKnown RBP16.23■□□□□ 0.19
SKP2-207ENST00000513263 FNBP4Q8N3X1 1017 aaPredicted RBP16.22■□□□□ 0.19
SKP2-207ENST00000513263 USP21Q9UK80 565 aa16.22■□□□□ 0.19
SKP2-207ENST00000513263 ATRNO75882 1429 aa16.21■□□□□ 0.19
SKP2-207ENST00000513263 ITSN1Q15811 1721 aa16.21■□□□□ 0.19
SKP2-207ENST00000513263 ABCA3Q99758 1704 aa16.21■□□□□ 0.19
SKP2-207ENST00000513263 EIF3AQ14152 1382 aaKnown RBP16.21■□□□□ 0.19
SKP2-207ENST00000513263 STK26Q9P289 416 aa16.2■□□□□ 0.18
SKP2-207ENST00000513263 C14orf93Q9H972 538 aaKnown RBP16.19■□□□□ 0.18
SKP2-207ENST00000513263 TNS3Q68CZ2 1445 aa16.19■□□□□ 0.18
SKP2-207ENST00000513263 ANKARQ7Z5J8 1434 aa16.19■□□□□ 0.18
SKP2-207ENST00000513263 PLCH1Q4KWH8 1693 aa16.18■□□□□ 0.18
SKP2-207ENST00000513263 STAC3Q96MF2 364 aa16.18■□□□□ 0.18
SKP2-207ENST00000513263 RAB3GAP2Q9H2M9 1393 aa16.17■□□□□ 0.18
SKP2-207ENST00000513263 PLEKHH1Q9ULM0 1364 aa16.17■□□□□ 0.18
SKP2-207ENST00000513263 FOXO3O43524 673 aa16.17■□□□□ 0.18
SKP2-207ENST00000513263 WAPLQ7Z5K2 1190 aa16.17■□□□□ 0.18
SKP2-207ENST00000513263 ARHGEF10O15013 1369 aa16.16■□□□□ 0.18
SKP2-207ENST00000513263 PSME1Q06323 249 aa16.16■□□□□ 0.18
SKP2-207ENST00000513263 TMEM132EQ6IEE7 984 aa16.16■□□□□ 0.18
SKP2-207ENST00000513263 ADGRB1O14514 1584 aa16.15■□□□□ 0.18
SKP2-207ENST00000513263 BCL9LQ86UU0 1499 aa16.15■□□□□ 0.18
SKP2-207ENST00000513263 SPATA31A3Q5VYP0 1347 aa16.15■□□□□ 0.18
SKP2-207ENST00000513263 SRCAPQ6ZRS2 3230 aa16.15■□□□□ 0.18
SKP2-207ENST00000513263 SBNO1A3KN83 1393 aa16.14■□□□□ 0.17
SKP2-207ENST00000513263 SLIT2O94813 1529 aa16.14■□□□□ 0.17
SKP2-207ENST00000513263 ARHGEF28Q8N1W1 1705 aaKnown RBP16.14■□□□□ 0.17
SKP2-207ENST00000513263 TRPM3Q9HCF6 1732 aaPredicted RBP16.13■□□□□ 0.17
SKP2-207ENST00000513263 KIAA1210Q9ULL0 1709 aa16.13■□□□□ 0.17
SKP2-207ENST00000513263 TULP4Q9NRJ4 1543 aa16.13■□□□□ 0.17
SKP2-207ENST00000513263 PHF8Q9UPP1 1060 aa16.12■□□□□ 0.17
SKP2-207ENST00000513263 ALS2Q96Q42 1657 aa16.11■□□□□ 0.17
SKP2-207ENST00000513263 NUTM2FA1L443 756 aa16.11■□□□□ 0.17
SKP2-207ENST00000513263 HAP1P54257 671 aaPredicted RBP16.11■□□□□ 0.17
SKP2-207ENST00000513263 CCDC125Q86Z20 511 aa16.11■□□□□ 0.17
SKP2-207ENST00000513263 POGKQ9P215 609 aa16.11■□□□□ 0.17
SKP2-207ENST00000513263 BRWD3Q6RI45 1802 aa16.1■□□□□ 0.17
SKP2-207ENST00000513263 GLI3P10071 1580 aa16.1■□□□□ 0.17
SKP2-207ENST00000513263 HRCP23327 699 aa16.1■□□□□ 0.17
SKP2-207ENST00000513263 XPCQ01831 940 aaPredicted RBP16.1■□□□□ 0.17
SKP2-207ENST00000513263 CFAP70Q5T0N1 1121 aa16.1■□□□□ 0.17
SKP2-207ENST00000513263 KRT28Q7Z3Y7 464 aa16.1■□□□□ 0.17
SKP2-207ENST00000513263 PRAM1Q96QH2 718 aa16.1■□□□□ 0.17
SKP2-207ENST00000513263 COL14A1Q05707 1796 aaKnown RBP16.09■□□□□ 0.17
SKP2-207ENST00000513263 UNC5CLQ8IV45 518 aa16.09■□□□□ 0.17
SKP2-207ENST00000513263 GJD4Q96KN9 370 aaPredicted RBP16.09■□□□□ 0.17
SKP2-207ENST00000513263 RALGAPBQ86X10 1494 aa16.09■□□□□ 0.17
SKP2-207ENST00000513263 NRAPQ86VF7 1730 aa16.08■□□□□ 0.17
SKP2-207ENST00000513263 CRYBG1Q9Y4K1 1723 aa16.08■□□□□ 0.16
SKP2-207ENST00000513263 GPRASP1Q5JY77 1395 aa16.07■□□□□ 0.16
SKP2-207ENST00000513263 TOPAZ1Q8N9V7 1692 aa16.04■□□□□ 0.16
SKP2-207ENST00000513263 ATP7BP35670 1465 aa16.03■□□□□ 0.16
SKP2-207ENST00000513263 BLMP54132 1417 aaPredicted RBP16.03■□□□□ 0.16
SKP2-207ENST00000513263 SAFB2Q14151 953 aaKnown RBP eCLIP16.03■□□□□ 0.16
SKP2-207ENST00000513263 VPS72Q15906 364 aa16.02■□□□□ 0.16
SKP2-207ENST00000513263 DCAF11Q8TEB1 546 aa16.02■□□□□ 0.16
SKP2-207ENST00000513263 LMOD2Q6P5Q4 547 aa16.01■□□□□ 0.15
SKP2-207ENST00000513263 RGPD1P0DJD0 1748 aa16.01■□□□□ 0.15
SKP2-207ENST00000513263 PHRF1Q9P1Y6 1649 aaKnown RBP16.01■□□□□ 0.15
SKP2-207ENST00000513263 ZRANB1Q9UGI0 708 aa16■□□□□ 0.15
SKP2-207ENST00000513263 TRAK1Q9UPV9 953 aa16■□□□□ 0.15
SKP2-207ENST00000513263 WASLO00401 505 aaPredicted RBP15.99■□□□□ 0.15
SKP2-207ENST00000513263 SF3B2Q13435 895 aaKnown RBP15.98■□□□□ 0.15
SKP2-207ENST00000513263 MINK1Q8N4C8 1332 aaPredicted RBP15.97■□□□□ 0.15
SKP2-207ENST00000513263 PMFBP1Q8TBY8 1022 aa15.97■□□□□ 0.15
SKP2-207ENST00000513263 NGDNQ8NEJ9 315 aaKnown RBP15.96■□□□□ 0.15
SKP2-207ENST00000513263 HIRIP3Q9BW71 556 aaPredicted RBP15.96■□□□□ 0.15
SKP2-207ENST00000513263 KDM2AQ9Y2K7 1162 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms