RNA–Protein interactions for RNA: ENST00000513153.5

LINC01088-210, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 695 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-210ENST00000513153 BRICD5Q6PL45 260 aa10.74□□□□□ -0.69
LINC01088-210ENST00000513153 SENP2Q9HC62 589 aa10.74□□□□□ -0.69
LINC01088-210ENST00000513153 SALL2Q9Y467 1007 aaPredicted RBP10.74□□□□□ -0.69
LINC01088-210ENST00000513153 TRIM47Q96LD4 638 aa10.73□□□□□ -0.69
LINC01088-210ENST00000513153 FECHP22830 423 aa10.72□□□□□ -0.69
LINC01088-210ENST00000513153 J3QL48 77 aa10.71□□□□□ -0.69
LINC01088-210ENST00000513153 GCGRP47871 477 aa10.71□□□□□ -0.69
LINC01088-210ENST00000513153 TRIM32Q13049 653 aa10.71□□□□□ -0.69
LINC01088-210ENST00000513153 MSS51Q4VC12 460 aa10.71□□□□□ -0.69
LINC01088-210ENST00000513153 MRGPRX2Q96LB1 330 aa10.71□□□□□ -0.69
LINC01088-210ENST00000513153 RNF19BQ6ZMZ0 732 aa10.7□□□□□ -0.7
LINC01088-210ENST00000513153 NLRP7Q8WX94 980 aa10.69□□□□□ -0.7
LINC01088-210ENST00000513153 SULF1Q8IWU6 871 aa10.67□□□□□ -0.7
LINC01088-210ENST00000513153 HPS1Q92902 700 aa10.67□□□□□ -0.7
LINC01088-210ENST00000513153 KIFC2Q96AC6 838 aa10.67□□□□□ -0.7
LINC01088-210ENST00000513153 TESPA1A2RU30 521 aaPredicted RBP10.65□□□□□ -0.7
LINC01088-210ENST00000513153 GNPATO15228 680 aa10.65□□□□□ -0.7
LINC01088-210ENST00000513153 GRIPAP1Q4V328 841 aa10.64□□□□□ -0.71
LINC01088-210ENST00000513153 REPIN1Q9BWE0 567 aaKnown RBP10.64□□□□□ -0.71
LINC01088-210ENST00000513153 FAM181BA6NEQ2 426 aa10.63□□□□□ -0.71
LINC01088-210ENST00000513153 SLC16A10Q8TF71 515 aa10.63□□□□□ -0.71
LINC01088-210ENST00000513153 MMP16P51512 607 aa10.62□□□□□ -0.71
LINC01088-210ENST00000513153 Q3C1V9 767 aa10.62□□□□□ -0.71
LINC01088-210ENST00000513153 RBM26Q5T8P6 1007 aaKnown RBP10.62□□□□□ -0.71
LINC01088-210ENST00000513153 GPR37O15354 613 aa10.59□□□□□ -0.71
LINC01088-210ENST00000513153 RC3H1Q5TC82 1133 aaKnown RBP10.59□□□□□ -0.71
LINC01088-210ENST00000513153 CCDC24Q8N4L8 307 aa10.58□□□□□ -0.72
LINC01088-210ENST00000513153 PHOX2BQ99453 314 aa10.58□□□□□ -0.72
LINC01088-210ENST00000513153 NXF1Q9UBU9 619 aaKnown RBP10.58□□□□□ -0.72
LINC01088-210ENST00000513153 USB1Q9BQ65 265 aaKnown RBP10.57□□□□□ -0.72
LINC01088-210ENST00000513153 DXOO77932 396 aaKnown RBP10.56□□□□□ -0.72
LINC01088-210ENST00000513153 GMPRP36959 345 aa10.56□□□□□ -0.72
LINC01088-210ENST00000513153 ZSCAN1Q8NBB4 408 aa10.56□□□□□ -0.72
LINC01088-210ENST00000513153 KDM2AQ9Y2K7 1162 aa10.56□□□□□ -0.72
LINC01088-210ENST00000513153 ALDH1A1P00352 501 aa10.55□□□□□ -0.72
LINC01088-210ENST00000513153 SKOR1P84550 965 aa10.55□□□□□ -0.72
LINC01088-210ENST00000513153 WNT7BP56706 349 aa10.54□□□□□ -0.72
LINC01088-210ENST00000513153 SMYD5Q6GMV2 418 aa10.54□□□□□ -0.72
LINC01088-210ENST00000513153 HAP1P54257 671 aaPredicted RBP10.53□□□□□ -0.72
LINC01088-210ENST00000513153 IRF7Q92985 503 aa10.53□□□□□ -0.72
LINC01088-210ENST00000513153 LORP23490 312 aaPredicted RBP10.52□□□□□ -0.73
LINC01088-210ENST00000513153 BMP1P13497 986 aa10.51□□□□□ -0.73
LINC01088-210ENST00000513153 LOC100996750A0A140TA64 210 aa10.5□□□□□ -0.73
LINC01088-210ENST00000513153 VEGFBP49765 207 aa10.5□□□□□ -0.73
LINC01088-210ENST00000513153 NPAS3Q8IXF0 933 aa10.5□□□□□ -0.73
LINC01088-210ENST00000513153 KRTAP4-6Q9BYQ5 205 aa10.5□□□□□ -0.73
LINC01088-210ENST00000513153 KDM4AO75164 1064 aa10.49□□□□□ -0.73
LINC01088-210ENST00000513153 CD46P15529 392 aa10.49□□□□□ -0.73
LINC01088-210ENST00000513153 TRIM46Q7Z4K8 759 aa10.49□□□□□ -0.73
LINC01088-210ENST00000513153 CAPN5O15484 640 aaPredicted RBP10.48□□□□□ -0.73
LINC01088-210ENST00000513153 H3BM21 787 aa10.47□□□□□ -0.73
LINC01088-210ENST00000513153 HLA-CQ95604 372 aa10.47□□□□□ -0.73
LINC01088-210ENST00000513153 WASF2Q9Y6W5 498 aa10.46□□□□□ -0.73
LINC01088-210ENST00000513153 EHBP1Q8NDI1 1231 aa10.45□□□□□ -0.74
LINC01088-210ENST00000513153 SIAH2O43255 324 aa10.44□□□□□ -0.74
LINC01088-210ENST00000513153 ERBB4Q15303 1308 aa10.43□□□□□ -0.74
LINC01088-210ENST00000513153 JUNDP17535 347 aa10.42□□□□□ -0.74
LINC01088-210ENST00000513153 USP46P62068 366 aa10.42□□□□□ -0.74
LINC01088-210ENST00000513153 GPIHBP1Q8IV16 184 aa10.42□□□□□ -0.74
LINC01088-210ENST00000513153 PTCRAQ6ISU1 281 aaPredicted RBP10.4□□□□□ -0.74
LINC01088-210ENST00000513153 NUDT12Q9BQG2 462 aa10.4□□□□□ -0.74
LINC01088-210ENST00000513153 HOXA2O43364 376 aa10.39□□□□□ -0.75
LINC01088-210ENST00000513153 GUCA2AQ02747 115 aa10.39□□□□□ -0.75
LINC01088-210ENST00000513153 ZFP42Q96MM3 310 aa10.39□□□□□ -0.75
LINC01088-210ENST00000513153 SYMPKQ92797 1274 aaKnown RBP10.38□□□□□ -0.75
LINC01088-210ENST00000513153 SH3BP2P78314 561 aa10.36□□□□□ -0.75
LINC01088-210ENST00000513153 VSIG10Q8N0Z9 540 aa10.36□□□□□ -0.75
LINC01088-210ENST00000513153 MDM2Q00987 491 aaPredicted RBP10.35□□□□□ -0.75
LINC01088-210ENST00000513153 SUZ12Q15022 739 aaKnown RBP10.34□□□□□ -0.75
LINC01088-210ENST00000513153 RETREG3Q86VR2 466 aa10.33□□□□□ -0.76
LINC01088-210ENST00000513153 TLL2Q9Y6L7 1015 aa10.32□□□□□ -0.76
LINC01088-210ENST00000513153 MAP2K5Q13163 448 aa10.31□□□□□ -0.76
LINC01088-210ENST00000513153 MRPL14Q6P1L8 145 aaKnown RBP10.31□□□□□ -0.76
LINC01088-210ENST00000513153 SCARF1Q14162 830 aa10.3□□□□□ -0.76
LINC01088-210ENST00000513153 SOBPA7XYQ1 873 aa10.29□□□□□ -0.76
LINC01088-210ENST00000513153 CCNYL3P0C7X3 344 aa10.29□□□□□ -0.76
LINC01088-210ENST00000513153 NNTQ13423 1086 aa10.29□□□□□ -0.76
LINC01088-210ENST00000513153 LINC01559Q495D7 138 aa10.29□□□□□ -0.76
LINC01088-210ENST00000513153 PURBQ96QR8 312 aaKnown RBP10.29□□□□□ -0.76
LINC01088-210ENST00000513153 PLEKHG3A1L390 1219 aa10.28□□□□□ -0.76
LINC01088-210ENST00000513153 MS4A1P11836 297 aa10.28□□□□□ -0.76
LINC01088-210ENST00000513153 IRF6O14896 467 aa10.27□□□□□ -0.77
LINC01088-210ENST00000513153 VSIG8P0DPA2 414 aa10.27□□□□□ -0.77
LINC01088-210ENST00000513153 NUTM1Q86Y26 1132 aa10.27□□□□□ -0.77
LINC01088-210ENST00000513153 BAP1Q92560 729 aa10.27□□□□□ -0.77
LINC01088-210ENST00000513153 UNC93B1Q9H1C4 597 aa10.27□□□□□ -0.77
LINC01088-210ENST00000513153 C6orf229H3BNL8 230 aa10.26□□□□□ -0.77
LINC01088-210ENST00000513153 KCTD17Q8N5Z5 321 aa10.26□□□□□ -0.77
LINC01088-210ENST00000513153 FDX1P10109 184 aa10.25□□□□□ -0.77
LINC01088-210ENST00000513153 WDR4P57081 412 aaKnown RBP10.25□□□□□ -0.77
LINC01088-210ENST00000513153 KCNMA1Q12791 1236 aa10.25□□□□□ -0.77
LINC01088-210ENST00000513153 EVA1BQ9NVM1 165 aa10.25□□□□□ -0.77
LINC01088-210ENST00000513153 TIMP2P16035 220 aa10.24□□□□□ -0.77
LINC01088-210ENST00000513153 VARSP26640 1264 aaKnown RBP10.24□□□□□ -0.77
LINC01088-210ENST00000513153 MPNDQ8N594 471 aa10.24□□□□□ -0.77
LINC01088-210ENST00000513153 ADH1CP00326 375 aa10.23□□□□□ -0.77
LINC01088-210ENST00000513153 PTPRNQ16849 979 aa10.23□□□□□ -0.77
LINC01088-210ENST00000513153 PCDHGC3Q9UN70 934 aa10.23□□□□□ -0.77
LINC01088-210ENST00000513153 MINK1Q8N4C8 1332 aaPredicted RBP10.23□□□□□ -0.77
LINC01088-210ENST00000513153 KCNH2Q12809 1159 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms