RNA–Protein interactions for RNA: ENST00000513144.1

SERF1B-206, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 2

Gene SERF1B, Length 632 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-206ENST00000513144 PLEKHG3A1L390 1219 aa10.64□□□□□ -0.71
SERF1B-206ENST00000513144 FDX1P10109 184 aa10.64□□□□□ -0.71
SERF1B-206ENST00000513144 NEUROD2Q15784 382 aa10.64□□□□□ -0.71
SERF1B-206ENST00000513144 MYSM1Q5VVJ2 828 aa10.63□□□□□ -0.71
SERF1B-206ENST00000513144 PRKD2Q9BZL6 878 aa10.63□□□□□ -0.71
SERF1B-206ENST00000513144 Q3C1V9 767 aa10.62□□□□□ -0.71
SERF1B-206ENST00000513144 RSBN1LQ6PCB5 846 aaPredicted RBP10.62□□□□□ -0.71
SERF1B-206ENST00000513144 PCDHB15Q9Y5E8 787 aa10.62□□□□□ -0.71
SERF1B-206ENST00000513144 SPTLC1O15269 473 aa10.61□□□□□ -0.71
SERF1B-206ENST00000513144 LAPTM4AQ15012 233 aa10.61□□□□□ -0.71
SERF1B-206ENST00000513144 DIXDC1Q155Q3 683 aa10.61□□□□□ -0.71
SERF1B-206ENST00000513144 TRAF7Q6Q0C0 670 aa10.61□□□□□ -0.71
SERF1B-206ENST00000513144 PRDM9Q9NQV7 894 aa10.61□□□□□ -0.71
SERF1B-206ENST00000513144 RIC3Q7Z5B4 369 aa10.6□□□□□ -0.71
SERF1B-206ENST00000513144 ANKLE1Q8NAG6 615 aa10.6□□□□□ -0.71
SERF1B-206ENST00000513144 LIMD1Q9UGP4 676 aa10.6□□□□□ -0.71
SERF1B-206ENST00000513144 GJA5P36382 358 aa10.59□□□□□ -0.71
SERF1B-206ENST00000513144 USB1Q9BQ65 265 aaKnown RBP10.59□□□□□ -0.71
SERF1B-206ENST00000513144 LCE2BO14633 110 aa10.58□□□□□ -0.72
SERF1B-206ENST00000513144 MSS51Q4VC12 460 aa10.58□□□□□ -0.72
SERF1B-206ENST00000513144 EMID1Q96A84 441 aaPredicted RBP10.58□□□□□ -0.72
SERF1B-206ENST00000513144 DDRGK1Q96HY6 314 aa10.58□□□□□ -0.72
SERF1B-206ENST00000513144 V9GY48 417 aaPredicted RBP10.58□□□□□ -0.72
SERF1B-206ENST00000513144 PLA2G2CQ5R387 149 aa10.56□□□□□ -0.72
SERF1B-206ENST00000513144 POLR3EQ9NVU0 708 aa10.56□□□□□ -0.72
SERF1B-206ENST00000513144 C6orf229H3BNL8 230 aa10.55□□□□□ -0.72
SERF1B-206ENST00000513144 MMP16P51512 607 aa10.55□□□□□ -0.72
SERF1B-206ENST00000513144 RETREG3Q86VR2 466 aa10.55□□□□□ -0.72
SERF1B-206ENST00000513144 HRCP23327 699 aa10.54□□□□□ -0.72
SERF1B-206ENST00000513144 SLC19A1P41440 591 aa10.54□□□□□ -0.72
SERF1B-206ENST00000513144 LIAT1Q6ZQX7 453 aa10.54□□□□□ -0.72
SERF1B-206ENST00000513144 RSPH6AQ9H0K4 717 aa10.54□□□□□ -0.72
SERF1B-206ENST00000513144 FCF1Q9Y324 198 aaKnown RBP10.54□□□□□ -0.72
SERF1B-206ENST00000513144 DXOO77932 396 aaKnown RBP10.53□□□□□ -0.72
SERF1B-206ENST00000513144 QPCTQ16769 361 aa10.53□□□□□ -0.72
SERF1B-206ENST00000513144 CSPP1Q1MSJ5 1256 aa10.53□□□□□ -0.72
SERF1B-206ENST00000513144 TUSC1Q2TAM9 212 aa10.53□□□□□ -0.72
SERF1B-206ENST00000513144 IL27Q8NEV9 243 aa10.53□□□□□ -0.72
SERF1B-206ENST00000513144 CABLES1Q8TDN4 633 aa10.53□□□□□ -0.72
SERF1B-206ENST00000513144 CLK2P49760 499 aaKnown RBP10.52□□□□□ -0.73
SERF1B-206ENST00000513144 MTMR2Q13614 643 aa10.52□□□□□ -0.73
SERF1B-206ENST00000513144 SKIV2LQ15477 1246 aaKnown RBP10.52□□□□□ -0.73
SERF1B-206ENST00000513144 SH3D19Q5HYK7 790 aa10.52□□□□□ -0.73
SERF1B-206ENST00000513144 FBXO31Q5XUX0 539 aaPredicted RBP10.52□□□□□ -0.73
SERF1B-206ENST00000513144 PROCA1Q8NCQ7 364 aaPredicted RBP10.52□□□□□ -0.73
SERF1B-206ENST00000513144 LILRB3O75022 631 aa10.51□□□□□ -0.73
SERF1B-206ENST00000513144 PRPF38BQ5VTL8 546 aaKnown RBP10.5□□□□□ -0.73
SERF1B-206ENST00000513144 PRR7Q8TB68 274 aa10.5□□□□□ -0.73
SERF1B-206ENST00000513144 CFAP99D6REC4 459 aa10.49□□□□□ -0.73
SERF1B-206ENST00000513144 JUNDP17535 347 aa10.49□□□□□ -0.73
SERF1B-206ENST00000513144 SPRYD7Q5W111 196 aa10.49□□□□□ -0.73
SERF1B-206ENST00000513144 ZBTB3Q9H5J0 574 aa10.49□□□□□ -0.73
SERF1B-206ENST00000513144 SPDYE5A6NIY4 337 aa10.48□□□□□ -0.73
SERF1B-206ENST00000513144 RTL5Q5HYW3 569 aaPredicted RBP10.48□□□□□ -0.73
SERF1B-206ENST00000513144 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.48□□□□□ -0.73
SERF1B-206ENST00000513144 ZNF598Q86UK7 904 aaKnown RBP10.46□□□□□ -0.73
SERF1B-206ENST00000513144 DESI1Q6ICB0 168 aa10.45□□□□□ -0.74
SERF1B-206ENST00000513144 GOPCQ9HD26 462 aa10.45□□□□□ -0.74
SERF1B-206ENST00000513144 NUTM2BA6NNL0 878 aaPredicted RBP10.44□□□□□ -0.74
SERF1B-206ENST00000513144 NUTM2EB1AL46 878 aaPredicted RBP10.44□□□□□ -0.74
SERF1B-206ENST00000513144 GFRA3O60609 400 aa10.44□□□□□ -0.74
SERF1B-206ENST00000513144 RPIAP49247 311 aa10.44□□□□□ -0.74
SERF1B-206ENST00000513144 ZNF697Q5TEC3 545 aa10.44□□□□□ -0.74
SERF1B-206ENST00000513144 NUTM2DQ5VT03 806 aaPredicted RBP10.44□□□□□ -0.74
SERF1B-206ENST00000513144 NUTM2AQ8IVF1 878 aaPredicted RBP10.44□□□□□ -0.74
SERF1B-206ENST00000513144 CCDC24Q8N4L8 307 aa10.44□□□□□ -0.74
SERF1B-206ENST00000513144 ZNF775Q96BV0 537 aaPredicted RBP10.44□□□□□ -0.74
SERF1B-206ENST00000513144 ZNF787Q6DD87 383 aa10.43□□□□□ -0.74
SERF1B-206ENST00000513144 ZBTB24O43167 697 aaPredicted RBP10.42□□□□□ -0.74
SERF1B-206ENST00000513144 PTCRAQ6ISU1 281 aaPredicted RBP10.42□□□□□ -0.74
SERF1B-206ENST00000513144 TRIM67Q6ZTA4 783 aa10.42□□□□□ -0.74
SERF1B-206ENST00000513144 PER1O15534 1290 aaPredicted RBP10.41□□□□□ -0.74
SERF1B-206ENST00000513144 PTPRNQ16849 979 aa10.41□□□□□ -0.74
SERF1B-206ENST00000513144 PPP2R2DQ66LE6 453 aa10.41□□□□□ -0.74
SERF1B-206ENST00000513144 LYPD8Q6UX82 237 aa10.41□□□□□ -0.74
SERF1B-206ENST00000513144 NUDT12Q9BQG2 462 aa10.41□□□□□ -0.74
SERF1B-206ENST00000513144 PDZRN3Q9UPQ7 1066 aa10.41□□□□□ -0.74
SERF1B-206ENST00000513144 CD2BP2O95400 341 aaKnown RBP10.4□□□□□ -0.74
SERF1B-206ENST00000513144 EVA1BQ9NVM1 165 aa10.39□□□□□ -0.75
SERF1B-206ENST00000513144 LOC100996750A0A140TA64 210 aa10.38□□□□□ -0.75
SERF1B-206ENST00000513144 NRG2O14511 850 aaPredicted RBP10.38□□□□□ -0.75
SERF1B-206ENST00000513144 CCNYL3P0C7X3 344 aa10.38□□□□□ -0.75
SERF1B-206ENST00000513144 KRTAP4-6Q9BYQ5 205 aa10.38□□□□□ -0.75
SERF1B-206ENST00000513144 TNFRSF10AO00220 468 aa10.37□□□□□ -0.75
SERF1B-206ENST00000513144 GDF9O60383 454 aa10.37□□□□□ -0.75
SERF1B-206ENST00000513144 TRIM32Q13049 653 aa10.37□□□□□ -0.75
SERF1B-206ENST00000513144 TSC1Q92574 1164 aa10.37□□□□□ -0.75
SERF1B-206ENST00000513144 PCMTD1Q96MG8 357 aaPredicted RBP10.37□□□□□ -0.75
SERF1B-206ENST00000513144 CTDSPL2Q05D32 466 aa10.36□□□□□ -0.75
SERF1B-206ENST00000513144 ATP1B4Q9UN42 357 aaPredicted RBP10.36□□□□□ -0.75
SERF1B-206ENST00000513144 F12P00748 615 aaPredicted RBP10.35□□□□□ -0.75
SERF1B-206ENST00000513144 PRR20EP86478 221 aa10.35□□□□□ -0.75
SERF1B-206ENST00000513144 PRR20CP86479 221 aa10.35□□□□□ -0.75
SERF1B-206ENST00000513144 PRR20DP86480 221 aa10.35□□□□□ -0.75
SERF1B-206ENST00000513144 PRR20BP86481 221 aa10.35□□□□□ -0.75
SERF1B-206ENST00000513144 PRR20AP86496 221 aa10.35□□□□□ -0.75
SERF1B-206ENST00000513144 FOXC1Q12948 553 aa10.35□□□□□ -0.75
SERF1B-206ENST00000513144 PKD2L1Q9P0L9 805 aa10.35□□□□□ -0.75
SERF1B-206ENST00000513144 KCNH2Q12809 1159 aa10.34□□□□□ -0.75
SERF1B-206ENST00000513144 MAP10Q9P2G4 905 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms