RNA–Protein interactions for RNA: ENST00000512962.5

SDHA-215, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-215ENST00000512962 RXRBP28702 533 aa19.4■□□□□ 0.7
SDHA-215ENST00000512962 PTPRUQ92729 1446 aa19.4■□□□□ 0.7
SDHA-215ENST00000512962 NUTM2BA6NNL0 878 aaPredicted RBP19.39■□□□□ 0.69
SDHA-215ENST00000512962 NUTM2EB1AL46 878 aaPredicted RBP19.39■□□□□ 0.69
SDHA-215ENST00000512962 NUTM2AQ8IVF1 878 aaPredicted RBP19.39■□□□□ 0.69
SDHA-215ENST00000512962 NCOA3Q9Y6Q9 1424 aa19.39■□□□□ 0.69
SDHA-215ENST00000512962 ASXL1Q8IXJ9 1541 aa19.39■□□□□ 0.69
SDHA-215ENST00000512962 AFF2P51816 1311 aa19.38■□□□□ 0.69
SDHA-215ENST00000512962 VSIG10Q8N0Z9 540 aa19.38■□□□□ 0.69
SDHA-215ENST00000512962 RNF25Q96BH1 459 aaPredicted RBP19.38■□□□□ 0.69
SDHA-215ENST00000512962 SLC52A1Q9NWF4 448 aa19.38■□□□□ 0.69
SDHA-215ENST00000512962 E9PCH4 1651 aa19.37■□□□□ 0.69
SDHA-215ENST00000512962 NRXN3Q9Y4C0 1643 aa19.37■□□□□ 0.69
SDHA-215ENST00000512962 RPRD2Q5VT52 1461 aaKnown RBP19.37■□□□□ 0.69
SDHA-215ENST00000512962 DCAF8Q5TAQ9 597 aa19.37■□□□□ 0.69
SDHA-215ENST00000512962 NUTM2DQ5VT03 806 aaPredicted RBP19.37■□□□□ 0.69
SDHA-215ENST00000512962 BRINP3Q76B58 766 aa19.37■□□□□ 0.69
SDHA-215ENST00000512962 XRN1Q8IZH2 1706 aaKnown RBP19.37■□□□□ 0.69
SDHA-215ENST00000512962 UNC13BO14795 1591 aa19.36■□□□□ 0.69
SDHA-215ENST00000512962 PITPNM1O00562 1244 aa19.36■□□□□ 0.69
SDHA-215ENST00000512962 TBX22Q9Y458 520 aa19.36■□□□□ 0.69
SDHA-215ENST00000512962 ANKRD30AQ9BXX3 1397 aa19.35■□□□□ 0.69
SDHA-215ENST00000512962 C14orf37Q86TY3 774 aa19.35■□□□□ 0.69
SDHA-215ENST00000512962 ADGRL2O95490 1459 aa19.35■□□□□ 0.69
SDHA-215ENST00000512962 PPP1R15AO75807 674 aaPredicted RBP19.34■□□□□ 0.69
SDHA-215ENST00000512962 CADPS2Q86UW7 1296 aa19.33■□□□□ 0.68
SDHA-215ENST00000512962 MST1RQ04912 1400 aa19.33■□□□□ 0.68
SDHA-215ENST00000512962 SETD5Q9C0A6 1442 aa19.33■□□□□ 0.68
SDHA-215ENST00000512962 TRPM2O94759 1503 aa19.32■□□□□ 0.68
SDHA-215ENST00000512962 C19orf44Q9H6X5 657 aa19.32■□□□□ 0.68
SDHA-215ENST00000512962 SPRYD3Q8NCJ5 442 aa19.31■□□□□ 0.68
SDHA-215ENST00000512962 FAM212AQ96EL1 285 aa19.31■□□□□ 0.68
SDHA-215ENST00000512962 NALCNQ8IZF0 1738 aa19.31■□□□□ 0.68
SDHA-215ENST00000512962 ATF3P18847 181 aa19.3■□□□□ 0.68
SDHA-215ENST00000512962 DDX17Q92841 729 aaKnown RBP19.3■□□□□ 0.68
SDHA-215ENST00000512962 SETBP1Q9Y6X0 1596 aa19.29■□□□□ 0.68
SDHA-215ENST00000512962 HS6ST3Q8IZP7 471 aa19.29■□□□□ 0.68
SDHA-215ENST00000512962 PNPLA6Q8IY17 1366 aa19.29■□□□□ 0.68
SDHA-215ENST00000512962 LOC105371045A0A1W2PR82 267 aa19.28■□□□□ 0.68
SDHA-215ENST00000512962 PIK3R4Q99570 1358 aa19.28■□□□□ 0.68
SDHA-215ENST00000512962 C8orf37Q96NL8 207 aa19.27■□□□□ 0.68
SDHA-215ENST00000512962 DCCP43146 1447 aa19.26■□□□□ 0.67
SDHA-215ENST00000512962 ANKRD50Q9ULJ7 1429 aa19.26■□□□□ 0.67
SDHA-215ENST00000512962 RASEFQ8IZ41 740 aa19.26■□□□□ 0.67
SDHA-215ENST00000512962 AMOTL2Q9Y2J4 779 aa19.26■□□□□ 0.67
SDHA-215ENST00000512962 QTRT2Q9H974 415 aaKnown RBP19.24■□□□□ 0.67
SDHA-215ENST00000512962 IQGAP3Q86VI3 1631 aa19.23■□□□□ 0.67
SDHA-215ENST00000512962 RBM6P78332 1123 aaKnown RBP19.23■□□□□ 0.67
SDHA-215ENST00000512962 RIOK3O14730 519 aaKnown RBP19.22■□□□□ 0.67
SDHA-215ENST00000512962 KDM2AQ9Y2K7 1162 aa19.22■□□□□ 0.67
SDHA-215ENST00000512962 EP400Q96L91 3159 aa19.22■□□□□ 0.67
SDHA-215ENST00000512962 LAMC1P11047 1609 aa19.22■□□□□ 0.67
SDHA-215ENST00000512962 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.21■□□□□ 0.67
SDHA-215ENST00000512962 HDGFP51858 240 aaKnown RBP19.19■□□□□ 0.66
SDHA-215ENST00000512962 METP08581 1390 aa19.19■□□□□ 0.66
SDHA-215ENST00000512962 ADGRL3Q9HAR2 1447 aa19.18■□□□□ 0.66
SDHA-215ENST00000512962 ADAMTS2O95450 1211 aa19.17■□□□□ 0.66
SDHA-215ENST00000512962 LRRC59Q96AG4 307 aaKnown RBP19.16■□□□□ 0.66
SDHA-215ENST00000512962 ATAD2Q6PL18 1390 aa19.16■□□□□ 0.66
SDHA-215ENST00000512962 TSHZ2Q9NRE2 1034 aa19.15■□□□□ 0.66
SDHA-215ENST00000512962 COL22A1Q8NFW1 1626 aaPredicted RBP19.14■□□□□ 0.66
SDHA-215ENST00000512962 SPHKAPQ2M3C7 1700 aa19.14■□□□□ 0.66
SDHA-215ENST00000512962 CHRM1P11229 460 aaPredicted RBP19.14■□□□□ 0.65
SDHA-215ENST00000512962 TAOK2Q9UL54 1235 aa19.14■□□□□ 0.65
SDHA-215ENST00000512962 NGLY1Q96IV0 654 aa19.13■□□□□ 0.65
SDHA-215ENST00000512962 C1orf167Q5SNV9 1468 aa19.13■□□□□ 0.65
SDHA-215ENST00000512962 MARF1Q9Y4F3 1742 aaKnown RBP19.12■□□□□ 0.65
SDHA-215ENST00000512962 ATRNO75882 1429 aa19.12■□□□□ 0.65
SDHA-215ENST00000512962 NEXMIFQ5QGS0 1516 aa19.11■□□□□ 0.65
SDHA-215ENST00000512962 FAM50AQ14320 339 aaKnown RBP19.1■□□□□ 0.65
SDHA-215ENST00000512962 USP21Q9UK80 565 aa19.09■□□□□ 0.65
SDHA-215ENST00000512962 CLTCL1P53675 1640 aa19.08■□□□□ 0.65
SDHA-215ENST00000512962 SOS2Q07890 1332 aaPredicted RBP19.07■□□□□ 0.64
SDHA-215ENST00000512962 VGFO15240 615 aaPredicted RBP19.07■□□□□ 0.64
SDHA-215ENST00000512962 CHADLQ6NUI6 762 aa19.07■□□□□ 0.64
SDHA-215ENST00000512962 ORAI2Q96SN7 254 aa19.07■□□□□ 0.64
SDHA-215ENST00000512962 BRWD3Q6RI45 1802 aa19.07■□□□□ 0.64
SDHA-215ENST00000512962 MYOM2P54296 1465 aa19.06■□□□□ 0.64
SDHA-215ENST00000512962 BCL9LQ86UU0 1499 aa19.06■□□□□ 0.64
SDHA-215ENST00000512962 ZRANB1Q9UGI0 708 aa19.06■□□□□ 0.64
SDHA-215ENST00000512962 PTCH1Q13635 1447 aa19.06■□□□□ 0.64
SDHA-215ENST00000512962 NKX1-1Q15270 411 aaPredicted RBP19.05■□□□□ 0.64
SDHA-215ENST00000512962 FNBP4Q8N3X1 1017 aaPredicted RBP19.05■□□□□ 0.64
SDHA-215ENST00000512962 GLI3P10071 1580 aa19.04■□□□□ 0.64
SDHA-215ENST00000512962 PYGBP11216 843 aa19.04■□□□□ 0.64
SDHA-215ENST00000512962 TRPC5Q9UL62 973 aaPredicted RBP19.04■□□□□ 0.64
SDHA-215ENST00000512962 ROBO2Q9HCK4 1378 aa19.03■□□□□ 0.64
SDHA-215ENST00000512962 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.03■□□□□ 0.64
SDHA-215ENST00000512962 STK25O00506 426 aa19.02■□□□□ 0.64
SDHA-215ENST00000512962 NUP155O75694 1391 aa19.02■□□□□ 0.64
SDHA-215ENST00000512962 PXDNQ92626 1479 aa19.01■□□□□ 0.63
SDHA-215ENST00000512962 LRP5O75197 1615 aa19■□□□□ 0.63
SDHA-215ENST00000512962 ROCK1Q13464 1354 aa18.98■□□□□ 0.63
SDHA-215ENST00000512962 KIF1BO60333 1816 aa18.97■□□□□ 0.63
SDHA-215ENST00000512962 ZNF326Q5BKZ1 582 aaKnown RBP18.97■□□□□ 0.63
SDHA-215ENST00000512962 SGIP1Q9BQI5 828 aa18.97■□□□□ 0.63
SDHA-215ENST00000512962 PRAG1Q86YV5 1406 aa18.95■□□□□ 0.62
SDHA-215ENST00000512962 DEFB132Q7Z7B7 95 aa18.95■□□□□ 0.62
SDHA-215ENST00000512962 RALGAPBQ86X10 1494 aa18.95■□□□□ 0.62
SDHA-215ENST00000512962 CDC42BPGQ6DT37 1551 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms