RNA–Protein interactions for RNA: ENST00000512713.5

YIPF3-216, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 306 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-216ENST00000512713 SOS2Q07890 1332 aaPredicted RBP13.44□□□□□ -0.26
YIPF3-216ENST00000512713 NPHP3Q7Z494 1330 aa13.44□□□□□ -0.26
YIPF3-216ENST00000512713 TECPR2O15040 1411 aa13.44□□□□□ -0.26
YIPF3-216ENST00000512713 PNPLA6Q8IY17 1366 aa13.44□□□□□ -0.26
YIPF3-216ENST00000512713 LRP6O75581 1613 aa13.43□□□□□ -0.26
YIPF3-216ENST00000512713 NUTM2FA1L443 756 aa13.43□□□□□ -0.26
YIPF3-216ENST00000512713 FOXO3O43524 673 aa13.43□□□□□ -0.26
YIPF3-216ENST00000512713 RXRBP28702 533 aa13.43□□□□□ -0.26
YIPF3-216ENST00000512713 DCAF11Q8TEB1 546 aa13.43□□□□□ -0.26
YIPF3-216ENST00000512713 C8orf37Q96NL8 207 aa13.43□□□□□ -0.26
YIPF3-216ENST00000512713 YTHDC2Q9H6S0 1430 aaKnown RBP13.43□□□□□ -0.26
YIPF3-216ENST00000512713 KDM2AQ9Y2K7 1162 aa13.43□□□□□ -0.26
YIPF3-216ENST00000512713 ADAMTS2O95450 1211 aa13.42□□□□□ -0.26
YIPF3-216ENST00000512713 NGLY1Q96IV0 654 aa13.42□□□□□ -0.26
YIPF3-216ENST00000512713 POGKQ9P215 609 aa13.42□□□□□ -0.26
YIPF3-216ENST00000512713 AFF2P51816 1311 aa13.41□□□□□ -0.26
YIPF3-216ENST00000512713 PRAM1Q96QH2 718 aa13.41□□□□□ -0.26
YIPF3-216ENST00000512713 PLEKHH1Q9ULM0 1364 aa13.41□□□□□ -0.26
YIPF3-216ENST00000512713 MYOM2P54296 1465 aa13.4□□□□□ -0.26
YIPF3-216ENST00000512713 XPCQ01831 940 aaPredicted RBP13.39□□□□□ -0.27
YIPF3-216ENST00000512713 SAFB2Q14151 953 aaKnown RBP eCLIP13.39□□□□□ -0.27
YIPF3-216ENST00000512713 NRXN1Q9ULB1 1477 aa13.39□□□□□ -0.27
YIPF3-216ENST00000512713 PPLO60437 1756 aa13.39□□□□□ -0.27
YIPF3-216ENST00000512713 QTRT2Q9H974 415 aaKnown RBP13.38□□□□□ -0.27
YIPF3-216ENST00000512713 NALCNQ8IZF0 1738 aa13.37□□□□□ -0.27
YIPF3-216ENST00000512713 TRAK1Q9UPV9 953 aa13.37□□□□□ -0.27
YIPF3-216ENST00000512713 CDC42BPGQ6DT37 1551 aa13.37□□□□□ -0.27
YIPF3-216ENST00000512713 PSME1Q06323 249 aa13.36□□□□□ -0.27
YIPF3-216ENST00000512713 PHF8Q9UPP1 1060 aa13.36□□□□□ -0.27
YIPF3-216ENST00000512713 SETD1AO15047 1707 aaKnown RBP13.36□□□□□ -0.27
YIPF3-216ENST00000512713 SHPRHQ149N8 1683 aa13.35□□□□□ -0.27
YIPF3-216ENST00000512713 RBM6P78332 1123 aaKnown RBP13.35□□□□□ -0.27
YIPF3-216ENST00000512713 KRT28Q7Z3Y7 464 aa13.35□□□□□ -0.27
YIPF3-216ENST00000512713 USP21Q9UK80 565 aa13.35□□□□□ -0.27
YIPF3-216ENST00000512713 NHSL1Q5SYE7 1610 aa13.33□□□□□ -0.28
YIPF3-216ENST00000512713 FNBP4Q8N3X1 1017 aaPredicted RBP13.33□□□□□ -0.28
YIPF3-216ENST00000512713 TRPC5Q9UL62 973 aaPredicted RBP13.33□□□□□ -0.28
YIPF3-216ENST00000512713 HAP1P54257 671 aaPredicted RBP13.32□□□□□ -0.28
YIPF3-216ENST00000512713 HIRIP3Q9BW71 556 aaPredicted RBP13.32□□□□□ -0.28
YIPF3-216ENST00000512713 SPATA31A3Q5VYP0 1347 aa13.32□□□□□ -0.28
YIPF3-216ENST00000512713 MINK1Q8N4C8 1332 aaPredicted RBP13.32□□□□□ -0.28
YIPF3-216ENST00000512713 PXDNQ92626 1479 aa13.31□□□□□ -0.28
YIPF3-216ENST00000512713 LMOD2Q6P5Q4 547 aa13.31□□□□□ -0.28
YIPF3-216ENST00000512713 EIF3AQ14152 1382 aaKnown RBP13.31□□□□□ -0.28
YIPF3-216ENST00000512713 CDK12Q9NYV4 1490 aaPredicted RBP13.29□□□□□ -0.28
YIPF3-216ENST00000512713 DLC1Q96QB1 1528 aa13.29□□□□□ -0.28
YIPF3-216ENST00000512713 LAMC1P11047 1609 aa13.29□□□□□ -0.28
YIPF3-216ENST00000512713 WASLO00401 505 aaPredicted RBP13.29□□□□□ -0.28
YIPF3-216ENST00000512713 PMFBP1Q8TBY8 1022 aa13.29□□□□□ -0.28
YIPF3-216ENST00000512713 UPF1Q92900 1129 aaKnown RBP eCLIP13.29□□□□□ -0.28
YIPF3-216ENST00000512713 ANKARQ7Z5J8 1434 aa13.29□□□□□ -0.28
YIPF3-216ENST00000512713 GPRASP1Q5JY77 1395 aa13.28□□□□□ -0.28
YIPF3-216ENST00000512713 IFT172Q9UG01 1749 aa13.27□□□□□ -0.28
YIPF3-216ENST00000512713 PLEKHG5O94827 1062 aa13.27□□□□□ -0.29
YIPF3-216ENST00000512713 NGDNQ8NEJ9 315 aaKnown RBP13.27□□□□□ -0.29
YIPF3-216ENST00000512713 SBNO1A3KN83 1393 aa13.27□□□□□ -0.29
YIPF3-216ENST00000512713 ARHGEF10O15013 1369 aa13.27□□□□□ -0.29
YIPF3-216ENST00000512713 ADGRB1O14514 1584 aa13.27□□□□□ -0.29
YIPF3-216ENST00000512713 TNS3Q68CZ2 1445 aa13.25□□□□□ -0.29
YIPF3-216ENST00000512713 UNC5CLQ8IV45 518 aa13.25□□□□□ -0.29
YIPF3-216ENST00000512713 CABLES1Q8TDN4 633 aa13.25□□□□□ -0.29
YIPF3-216ENST00000512713 KNDC1Q76NI1 1749 aa13.25□□□□□ -0.29
YIPF3-216ENST00000512713 GJD4Q96KN9 370 aaPredicted RBP13.24□□□□□ -0.29
YIPF3-216ENST00000512713 RGS12O14924 1447 aa13.23□□□□□ -0.29
YIPF3-216ENST00000512713 PAK3O75914 559 aaPredicted RBP13.23□□□□□ -0.29
YIPF3-216ENST00000512713 NUDT16Q96DE0 195 aaKnown RBP13.23□□□□□ -0.29
YIPF3-216ENST00000512713 CDK19Q9BWU1 502 aa13.23□□□□□ -0.29
YIPF3-216ENST00000512713 ATRNO75882 1429 aa13.22□□□□□ -0.29
YIPF3-216ENST00000512713 PRR36Q9H6K5 1346 aa13.22□□□□□ -0.29
YIPF3-216ENST00000512713 NBPF1Q3BBV0 1214 aa13.22□□□□□ -0.29
YIPF3-216ENST00000512713 BCL9LQ86UU0 1499 aa13.22□□□□□ -0.29
YIPF3-216ENST00000512713 ATAD2Q6PL18 1390 aa13.21□□□□□ -0.29
YIPF3-216ENST00000512713 NEUROD1Q13562 356 aa13.21□□□□□ -0.29
YIPF3-216ENST00000512713 L3MBTL2Q969R5 705 aa13.21□□□□□ -0.29
YIPF3-216ENST00000512713 FMN2Q9NZ56 1722 aa13.21□□□□□ -0.3
YIPF3-216ENST00000512713 COL22A1Q8NFW1 1626 aaPredicted RBP13.21□□□□□ -0.3
YIPF3-216ENST00000512713 CCDC9Q9Y3X0 531 aaKnown RBP13.2□□□□□ -0.3
YIPF3-216ENST00000512713 CCDC61Q9Y6R9 512 aa13.2□□□□□ -0.3
YIPF3-216ENST00000512713 KIF1AQ12756 1690 aa13.2□□□□□ -0.3
YIPF3-216ENST00000512713 FAM83GA6ND36 823 aa13.19□□□□□ -0.3
YIPF3-216ENST00000512713 SRPK2P78362 688 aaKnown RBP13.19□□□□□ -0.3
YIPF3-216ENST00000512713 SIN3AQ96ST3 1273 aa13.19□□□□□ -0.3
YIPF3-216ENST00000512713 TULP4Q9NRJ4 1543 aa13.18□□□□□ -0.3
YIPF3-216ENST00000512713 CENPJQ9HC77 1338 aaPredicted RBP13.18□□□□□ -0.3
YIPF3-216ENST00000512713 VPS72Q15906 364 aa13.18□□□□□ -0.3
YIPF3-216ENST00000512713 ADGRB2O60241 1585 aa13.18□□□□□ -0.3
YIPF3-216ENST00000512713 CCDC125Q86Z20 511 aa13.17□□□□□ -0.3
YIPF3-216ENST00000512713 PLEKHG3A1L390 1219 aa13.16□□□□□ -0.3
YIPF3-216ENST00000512713 NBPF8Q3BBV2 869 aa13.16□□□□□ -0.3
YIPF3-216ENST00000512713 SLIT2O94813 1529 aa13.16□□□□□ -0.3
YIPF3-216ENST00000512713 ACEP12821 1306 aa13.15□□□□□ -0.3
YIPF3-216ENST00000512713 BTG4Q9NY30 223 aa13.15□□□□□ -0.3
YIPF3-216ENST00000512713 A0A0G2JS52 829 aa13.14□□□□□ -0.31
YIPF3-216ENST00000512713 MYT1Q01538 1121 aa13.14□□□□□ -0.31
YIPF3-216ENST00000512713 SEPT12Q8IYM1 358 aa13.14□□□□□ -0.31
YIPF3-216ENST00000512713 CABP2Q9NPB3 220 aa13.14□□□□□ -0.31
YIPF3-216ENST00000512713 PRDM11Q9NQV5 511 aa13.14□□□□□ -0.31
YIPF3-216ENST00000512713 RALGAPBQ86X10 1494 aa13.14□□□□□ -0.31
YIPF3-216ENST00000512713 POLR3AO14802 1390 aaPredicted RBP13.13□□□□□ -0.31
YIPF3-216ENST00000512713 ONECUT3O60422 494 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms