RNA–Protein interactions for RNA: ENST00000512670.1

PDE6A-203, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best)

Gene PDE6A, Length 2,189 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-203ENST00000512670 TESK2Q96S53 571 aa15.17■□□□□ 0.02
PDE6A-203ENST00000512670 DLC1Q96QB1 1528 aa15.17■□□□□ 0.02
PDE6A-203ENST00000512670 PTCH1Q13635 1447 aa15.17■□□□□ 0.02
PDE6A-203ENST00000512670 TMEM94Q12767 1356 aa15.17■□□□□ 0.02
PDE6A-203ENST00000512670 NALCNQ8IZF0 1738 aa15.16■□□□□ 0.02
PDE6A-203ENST00000512670 XIRP1Q702N8 1843 aaKnown RBP15.16■□□□□ 0.02
PDE6A-203ENST00000512670 EIF3AQ14152 1382 aaKnown RBP15.15■□□□□ 0.02
PDE6A-203ENST00000512670 DISP3Q9P2K9 1392 aa15.15■□□□□ 0.02
PDE6A-203ENST00000512670 LRRC7Q96NW7 1537 aa15.15■□□□□ 0.02
PDE6A-203ENST00000512670 C14orf37Q86TY3 774 aa15.15■□□□□ 0.02
PDE6A-203ENST00000512670 POLR3GLQ9BT43 218 aa15.15■□□□□ 0.02
PDE6A-203ENST00000512670 LTBP4Q8N2S1 1624 aa15.15■□□□□ 0.02
PDE6A-203ENST00000512670 NKTRP30414 1462 aaKnown RBP15.14■□□□□ 0.01
PDE6A-203ENST00000512670 FAM135BQ49AJ0 1406 aa15.14■□□□□ 0.01
PDE6A-203ENST00000512670 TULP4Q9NRJ4 1543 aa15.13■□□□□ 0.01
PDE6A-203ENST00000512670 CABP2Q9NPB3 220 aa15.12■□□□□ 0.01
PDE6A-203ENST00000512670 SIRT1Q96EB6 747 aa15.09■□□□□ 0.01
PDE6A-203ENST00000512670 CDK19Q9BWU1 502 aa15.09■□□□□ 0.01
PDE6A-203ENST00000512670 ADGRL3Q9HAR2 1447 aa15.08■□□□□ 0.01
PDE6A-203ENST00000512670 SRPK2P78362 688 aaKnown RBP15.08■□□□□ 0
PDE6A-203ENST00000512670 KIF7Q2M1P5 1343 aa15.07■□□□□ 0
PDE6A-203ENST00000512670 WASHC2AQ641Q2 1341 aa15.07■□□□□ 0
PDE6A-203ENST00000512670 PRR36Q9H6K5 1346 aa15.07■□□□□ 0
PDE6A-203ENST00000512670 WASLO00401 505 aaPredicted RBP15.07■□□□□ 0
PDE6A-203ENST00000512670 RGPD8O14715 1765 aaPredicted RBP15.06■□□□□ 0
PDE6A-203ENST00000512670 TMF1P82094 1093 aa15.05■□□□□ 0
PDE6A-203ENST00000512670 ADGRB2O60241 1585 aa15.05■□□□□ 0
PDE6A-203ENST00000512670 USP32Q8NFA0 1604 aa15.05■□□□□ -0
PDE6A-203ENST00000512670 ZNF316A6NFI3 1004 aaPredicted RBP15.05■□□□□ -0
PDE6A-203ENST00000512670 SBNO2Q9Y2G9 1366 aa15.05■□□□□ -0
PDE6A-203ENST00000512670 EVC2Q86UK5 1308 aa15.04■□□□□ -0
PDE6A-203ENST00000512670 C19orf44Q9H6X5 657 aa15.04■□□□□ -0
PDE6A-203ENST00000512670 MSH6P52701 1360 aa15.04■□□□□ -0
PDE6A-203ENST00000512670 CDC42BPGQ6DT37 1551 aa15.03■□□□□ -0
PDE6A-203ENST00000512670 FMN2Q9NZ56 1722 aa15.03■□□□□ -0
PDE6A-203ENST00000512670 CCDC7Q96M83 1385 aa15.02■□□□□ -0
PDE6A-203ENST00000512670 ATP7BP35670 1465 aa15.02□□□□□ -0.01
PDE6A-203ENST00000512670 PMFBP1Q8TBY8 1022 aa15.01□□□□□ -0.01
PDE6A-203ENST00000512670 TMC1Q8TDI8 760 aa15.01□□□□□ -0.01
PDE6A-203ENST00000512670 NUDT16Q96DE0 195 aaKnown RBP15.01□□□□□ -0.01
PDE6A-203ENST00000512670 ORAI2Q96SN7 254 aa15.01□□□□□ -0.01
PDE6A-203ENST00000512670 MYOM1P52179 1685 aa15.01□□□□□ -0.01
PDE6A-203ENST00000512670 ATF3P18847 181 aa15.01□□□□□ -0.01
PDE6A-203ENST00000512670 DDX17Q92841 729 aaKnown RBP15.01□□□□□ -0.01
PDE6A-203ENST00000512670 SLC12A5Q9H2X9 1139 aa15.01□□□□□ -0.01
PDE6A-203ENST00000512670 MST1RQ04912 1400 aa15□□□□□ -0.01
PDE6A-203ENST00000512670 CABP1Q9NZU7 370 aa14.99□□□□□ -0.01
PDE6A-203ENST00000512670 CERKQ8TCT0 537 aa14.98□□□□□ -0.01
PDE6A-203ENST00000512670 PPIP5K1Q6PFW1 1433 aa14.98□□□□□ -0.01
PDE6A-203ENST00000512670 C1orf167Q5SNV9 1468 aa14.98□□□□□ -0.01
PDE6A-203ENST00000512670 DDX10Q13206 875 aaKnown RBP14.98□□□□□ -0.01
PDE6A-203ENST00000512670 CNGB1Q14028 1251 aaPredicted RBP14.98□□□□□ -0.01
PDE6A-203ENST00000512670 ESCO1Q5FWF5 840 aa14.98□□□□□ -0.01
PDE6A-203ENST00000512670 NCOA3Q9Y6Q9 1424 aa14.97□□□□□ -0.01
PDE6A-203ENST00000512670 XPCQ01831 940 aaPredicted RBP14.97□□□□□ -0.01
PDE6A-203ENST00000512670 TOPAZ1Q8N9V7 1692 aa14.97□□□□□ -0.01
PDE6A-203ENST00000512670 PIP4K2BP78356 416 aa14.97□□□□□ -0.01
PDE6A-203ENST00000512670 CADPS2Q86UW7 1296 aa14.96□□□□□ -0.01
PDE6A-203ENST00000512670 SCAF1Q9H7N4 1312 aaKnown RBP14.96□□□□□ -0.01
PDE6A-203ENST00000512670 DCCP43146 1447 aa14.95□□□□□ -0.02
PDE6A-203ENST00000512670 SLAIN2Q9P270 581 aa14.95□□□□□ -0.02
PDE6A-203ENST00000512670 CD163L1Q9NR16 1453 aa14.94□□□□□ -0.02
PDE6A-203ENST00000512670 UBAP1LF5GYI3 381 aa14.94□□□□□ -0.02
PDE6A-203ENST00000512670 ATAD2Q6PL18 1390 aa14.94□□□□□ -0.02
PDE6A-203ENST00000512670 CCDC61Q9Y6R9 512 aa14.94□□□□□ -0.02
PDE6A-203ENST00000512670 FOXO3O43524 673 aa14.93□□□□□ -0.02
PDE6A-203ENST00000512670 BRINP3Q76B58 766 aa14.93□□□□□ -0.02
PDE6A-203ENST00000512670 PANK3Q9H999 370 aa14.92□□□□□ -0.02
PDE6A-203ENST00000512670 ANKARQ7Z5J8 1434 aa14.92□□□□□ -0.02
PDE6A-203ENST00000512670 A0A1W2PP64 1363 aa14.92□□□□□ -0.02
PDE6A-203ENST00000512670 ACEP12821 1306 aa14.92□□□□□ -0.02
PDE6A-203ENST00000512670 CDCA8Q53HL2 280 aa14.92□□□□□ -0.02
PDE6A-203ENST00000512670 PHF8Q9UPP1 1060 aa14.92□□□□□ -0.02
PDE6A-203ENST00000512670 ITSN1Q15811 1721 aa14.91□□□□□ -0.02
PDE6A-203ENST00000512670 ROBO1Q9Y6N7 1651 aa14.91□□□□□ -0.02
PDE6A-203ENST00000512670 PLEKHG5O94827 1062 aa14.91□□□□□ -0.02
PDE6A-203ENST00000512670 CARD14Q9BXL6 1004 aa14.91□□□□□ -0.02
PDE6A-203ENST00000512670 NGDNQ8NEJ9 315 aaKnown RBP14.9□□□□□ -0.02
PDE6A-203ENST00000512670 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.88□□□□□ -0.03
PDE6A-203ENST00000512670 PRKCSHP14314 528 aaPredicted RBP14.88□□□□□ -0.03
PDE6A-203ENST00000512670 ERICH6Q7L0X2 663 aa14.88□□□□□ -0.03
PDE6A-203ENST00000512670 PLEKHG3A1L390 1219 aa14.87□□□□□ -0.03
PDE6A-203ENST00000512670 NSD3Q9BZ95 1437 aa14.87□□□□□ -0.03
PDE6A-203ENST00000512670 AKAP12Q02952 1782 aa14.87□□□□□ -0.03
PDE6A-203ENST00000512670 KTN1Q86UP2 1357 aaKnown RBP14.87□□□□□ -0.03
PDE6A-203ENST00000512670 ANKRD36BQ8N2N9 1353 aa14.87□□□□□ -0.03
PDE6A-203ENST00000512670 TOM1O60784 492 aa14.87□□□□□ -0.03
PDE6A-203ENST00000512670 PUS7Q96PZ0 661 aaKnown RBP14.87□□□□□ -0.03
PDE6A-203ENST00000512670 ZRANB1Q9UGI0 708 aa14.87□□□□□ -0.03
PDE6A-203ENST00000512670 CPSF1Q10570 1443 aaKnown RBP14.86□□□□□ -0.03
PDE6A-203ENST00000512670 NUTM2GQ5VZR2 741 aa14.86□□□□□ -0.03
PDE6A-203ENST00000512670 PAK3O75914 559 aaPredicted RBP14.85□□□□□ -0.03
PDE6A-203ENST00000512670 POLR3AO14802 1390 aaPredicted RBP14.85□□□□□ -0.03
PDE6A-203ENST00000512670 PSME1Q06323 249 aa14.85□□□□□ -0.03
PDE6A-203ENST00000512670 MON2Q7Z3U7 1717 aa14.85□□□□□ -0.03
PDE6A-203ENST00000512670 KIF1AQ12756 1690 aa14.85□□□□□ -0.03
PDE6A-203ENST00000512670 USP6P35125 1406 aa14.84□□□□□ -0.03
PDE6A-203ENST00000512670 HDGFL2Q7Z4V5 671 aaPredicted RBP14.84□□□□□ -0.03
PDE6A-203ENST00000512670 IQSEC2Q5JU85 1478 aa14.84□□□□□ -0.03
PDE6A-203ENST00000512670 NRKQ7Z2Y5 1582 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms