RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 SOS2Q07890 1332 aaPredicted RBP21.82■■□□□ 1.08
CCHCR1-229ENST00000512418 AFF2P51816 1311 aa21.81■■□□□ 1.08
CCHCR1-229ENST00000512418 ABCC11Q96J66 1382 aa21.81■■□□□ 1.08
CCHCR1-229ENST00000512418 STK26Q9P289 416 aa21.8■■□□□ 1.08
CCHCR1-229ENST00000512418 RAB3GAP2Q9H2M9 1393 aa21.79■■□□□ 1.08
CCHCR1-229ENST00000512418 RXRBP28702 533 aa21.78■■□□□ 1.08
CCHCR1-229ENST00000512418 C8orf37Q96NL8 207 aa21.78■■□□□ 1.08
CCHCR1-229ENST00000512418 MYOM2P54296 1465 aa21.77■■□□□ 1.08
CCHCR1-229ENST00000512418 CDK12Q9NYV4 1490 aaPredicted RBP21.77■■□□□ 1.08
CCHCR1-229ENST00000512418 TMEM132EQ6IEE7 984 aa21.77■■□□□ 1.08
CCHCR1-229ENST00000512418 WAPLQ7Z5K2 1190 aa21.77■■□□□ 1.08
CCHCR1-229ENST00000512418 YTHDC2Q9H6S0 1430 aaKnown RBP21.77■■□□□ 1.08
CCHCR1-229ENST00000512418 NPHP3Q7Z494 1330 aa21.77■■□□□ 1.07
CCHCR1-229ENST00000512418 NRXN1Q9ULB1 1477 aa21.77■■□□□ 1.07
CCHCR1-229ENST00000512418 ESCO1Q5FWF5 840 aa21.76■■□□□ 1.07
CCHCR1-229ENST00000512418 PLEKHH1Q9ULM0 1364 aa21.74■■□□□ 1.07
CCHCR1-229ENST00000512418 COL22A1Q8NFW1 1626 aaPredicted RBP21.74■■□□□ 1.07
CCHCR1-229ENST00000512418 PXDNQ92626 1479 aa21.73■■□□□ 1.07
CCHCR1-229ENST00000512418 ADAMTS2O95450 1211 aa21.73■■□□□ 1.07
CCHCR1-229ENST00000512418 C14orf93Q9H972 538 aaKnown RBP21.73■■□□□ 1.07
CCHCR1-229ENST00000512418 FMN2Q9NZ56 1722 aa21.72■■□□□ 1.07
CCHCR1-229ENST00000512418 SIRT1Q96EB6 747 aa21.71■■□□□ 1.07
CCHCR1-229ENST00000512418 NGLY1Q96IV0 654 aa21.7■■□□□ 1.06
CCHCR1-229ENST00000512418 DHX57Q6P158 1386 aaKnown RBP21.7■■□□□ 1.06
CCHCR1-229ENST00000512418 NUTM2FA1L443 756 aa21.69■■□□□ 1.06
CCHCR1-229ENST00000512418 FOXO3O43524 673 aa21.69■■□□□ 1.06
CCHCR1-229ENST00000512418 CFAP70Q5T0N1 1121 aa21.69■■□□□ 1.06
CCHCR1-229ENST00000512418 QTRT2Q9H974 415 aaKnown RBP21.69■■□□□ 1.06
CCHCR1-229ENST00000512418 RBM6P78332 1123 aaKnown RBP21.68■■□□□ 1.06
CCHCR1-229ENST00000512418 KIF1AQ12756 1690 aa21.68■■□□□ 1.06
CCHCR1-229ENST00000512418 UPF1Q92900 1129 aaKnown RBP eCLIP21.67■■□□□ 1.06
CCHCR1-229ENST00000512418 RGS12O14924 1447 aa21.66■■□□□ 1.06
CCHCR1-229ENST00000512418 XPCQ01831 940 aaPredicted RBP21.65■■□□□ 1.06
CCHCR1-229ENST00000512418 FNBP4Q8N3X1 1017 aaPredicted RBP21.64■■□□□ 1.05
CCHCR1-229ENST00000512418 DLC1Q96QB1 1528 aa21.64■■□□□ 1.05
CCHCR1-229ENST00000512418 USP21Q9UK80 565 aa21.63■■□□□ 1.05
CCHCR1-229ENST00000512418 HRCP23327 699 aa21.62■■□□□ 1.05
CCHCR1-229ENST00000512418 PRAM1Q96QH2 718 aa21.62■■□□□ 1.05
CCHCR1-229ENST00000512418 ADGRB1O14514 1584 aa21.61■■□□□ 1.05
CCHCR1-229ENST00000512418 MARF1Q9Y4F3 1742 aaKnown RBP21.61■■□□□ 1.05
CCHCR1-229ENST00000512418 TRPC5Q9UL62 973 aaPredicted RBP21.61■■□□□ 1.05
CCHCR1-229ENST00000512418 SPATA31A3Q5VYP0 1347 aa21.59■■□□□ 1.05
CCHCR1-229ENST00000512418 RGPD8O14715 1765 aaPredicted RBP21.59■■□□□ 1.05
CCHCR1-229ENST00000512418 ADGRB2O60241 1585 aa21.58■■□□□ 1.05
CCHCR1-229ENST00000512418 ATRNO75882 1429 aa21.58■■□□□ 1.05
CCHCR1-229ENST00000512418 SAFB2Q14151 953 aaKnown RBP eCLIP21.58■■□□□ 1.05
CCHCR1-229ENST00000512418 STAC3Q96MF2 364 aa21.57■■□□□ 1.04
CCHCR1-229ENST00000512418 POGKQ9P215 609 aa21.57■■□□□ 1.04
CCHCR1-229ENST00000512418 PHF8Q9UPP1 1060 aa21.57■■□□□ 1.04
CCHCR1-229ENST00000512418 KRT28Q7Z3Y7 464 aa21.56■■□□□ 1.04
CCHCR1-229ENST00000512418 DCAF11Q8TEB1 546 aa21.56■■□□□ 1.04
CCHCR1-229ENST00000512418 BCL9LQ86UU0 1499 aa21.56■■□□□ 1.04
CCHCR1-229ENST00000512418 ANKARQ7Z5J8 1434 aa21.55■■□□□ 1.04
CCHCR1-229ENST00000512418 KDM2AQ9Y2K7 1162 aa21.55■■□□□ 1.04
CCHCR1-229ENST00000512418 TNS3Q68CZ2 1445 aa21.55■■□□□ 1.04
CCHCR1-229ENST00000512418 PSME1Q06323 249 aa21.54■■□□□ 1.04
CCHCR1-229ENST00000512418 TRAK1Q9UPV9 953 aa21.53■■□□□ 1.04
CCHCR1-229ENST00000512418 USP32Q8NFA0 1604 aa21.53■■□□□ 1.04
CCHCR1-229ENST00000512418 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.52■■□□□ 1.04
CCHCR1-229ENST00000512418 SBNO1A3KN83 1393 aa21.51■■□□□ 1.03
CCHCR1-229ENST00000512418 ATAD2Q6PL18 1390 aa21.51■■□□□ 1.03
CCHCR1-229ENST00000512418 EIF3AQ14152 1382 aaKnown RBP21.5■■□□□ 1.03
CCHCR1-229ENST00000512418 SLIT2O94813 1529 aa21.5■■□□□ 1.03
CCHCR1-229ENST00000512418 ARHGEF10O15013 1369 aa21.49■■□□□ 1.03
CCHCR1-229ENST00000512418 HIRIP3Q9BW71 556 aaPredicted RBP21.48■■□□□ 1.03
CCHCR1-229ENST00000512418 TULP4Q9NRJ4 1543 aa21.48■■□□□ 1.03
CCHCR1-229ENST00000512418 HAP1P54257 671 aaPredicted RBP21.47■■□□□ 1.03
CCHCR1-229ENST00000512418 PMFBP1Q8TBY8 1022 aa21.47■■□□□ 1.03
CCHCR1-229ENST00000512418 GJD4Q96KN9 370 aaPredicted RBP21.47■■□□□ 1.03
CCHCR1-229ENST00000512418 MINK1Q8N4C8 1332 aaPredicted RBP21.47■■□□□ 1.03
CCHCR1-229ENST00000512418 ABCA3Q99758 1704 aa21.46■■□□□ 1.03
CCHCR1-229ENST00000512418 UNC5CLQ8IV45 518 aa21.46■■□□□ 1.03
CCHCR1-229ENST00000512418 ARHGEF28Q8N1W1 1705 aaKnown RBP21.46■■□□□ 1.03
CCHCR1-229ENST00000512418 WASLO00401 505 aaPredicted RBP21.44■■□□□ 1.02
CCHCR1-229ENST00000512418 LMOD2Q6P5Q4 547 aa21.44■■□□□ 1.02
CCHCR1-229ENST00000512418 EP400Q96L91 3159 aa21.44■■□□□ 1.02
CCHCR1-229ENST00000512418 TRPM3Q9HCF6 1732 aaPredicted RBP21.43■■□□□ 1.02
CCHCR1-229ENST00000512418 CABLES1Q8TDN4 633 aa21.43■■□□□ 1.02
CCHCR1-229ENST00000512418 PRR36Q9H6K5 1346 aa21.43■■□□□ 1.02
CCHCR1-229ENST00000512418 RALGAPBQ86X10 1494 aa21.43■■□□□ 1.02
CCHCR1-229ENST00000512418 GLI3P10071 1580 aa21.42■■□□□ 1.02
CCHCR1-229ENST00000512418 GPRASP1Q5JY77 1395 aa21.42■■□□□ 1.02
CCHCR1-229ENST00000512418 NWD2Q9ULI1 1742 aa21.42■■□□□ 1.02
CCHCR1-229ENST00000512418 PLCH1Q4KWH8 1693 aa21.41■■□□□ 1.02
CCHCR1-229ENST00000512418 KIAA1210Q9ULL0 1709 aa21.41■■□□□ 1.02
CCHCR1-229ENST00000512418 ALS2Q96Q42 1657 aa21.4■■□□□ 1.02
CCHCR1-229ENST00000512418 PLEKHG5O94827 1062 aa21.4■■□□□ 1.02
CCHCR1-229ENST00000512418 ITSN1Q15811 1721 aa21.39■■□□□ 1.01
CCHCR1-229ENST00000512418 ATP7BP35670 1465 aa21.38■■□□□ 1.01
CCHCR1-229ENST00000512418 VPS72Q15906 364 aa21.37■■□□□ 1.01
CCHCR1-229ENST00000512418 NGDNQ8NEJ9 315 aaKnown RBP21.36■■□□□ 1.01
CCHCR1-229ENST00000512418 CCDC125Q86Z20 511 aa21.35■■□□□ 1.01
CCHCR1-229ENST00000512418 FAM83GA6ND36 823 aa21.33■■□□□ 1.01
CCHCR1-229ENST00000512418 NUDT16Q96DE0 195 aaKnown RBP21.33■■□□□ 1.01
CCHCR1-229ENST00000512418 CRYBG1Q9Y4K1 1723 aa21.32■■□□□ 1
CCHCR1-229ENST00000512418 NRAPQ86VF7 1730 aa21.32■■□□□ 1
CCHCR1-229ENST00000512418 COL14A1Q05707 1796 aaKnown RBP21.31■■□□□ 1
CCHCR1-229ENST00000512418 PAK3O75914 559 aaPredicted RBP21.31■■□□□ 1
CCHCR1-229ENST00000512418 CCDC9Q9Y3X0 531 aaKnown RBP21.31■■□□□ 1
CCHCR1-229ENST00000512418 BRWD3Q6RI45 1802 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms