RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 GLI2P10070 1586 aa12.08□□□□□ -0.48
CPNE4-210ENST00000512332 C20orf194Q5TEA3 1177 aa12.08□□□□□ -0.48
CPNE4-210ENST00000512332 MORC1Q86VD1 984 aa12.08□□□□□ -0.48
CPNE4-210ENST00000512332 CCDC146Q8IYE0 955 aa12.08□□□□□ -0.48
CPNE4-210ENST00000512332 SLC12A5Q9H2X9 1139 aa12.08□□□□□ -0.48
CPNE4-210ENST00000512332 NSD2O96028 1365 aa12.08□□□□□ -0.48
CPNE4-210ENST00000512332 EVC2Q86UK5 1308 aa12.08□□□□□ -0.48
CPNE4-210ENST00000512332 TMEM132EQ6IEE7 984 aa12.07□□□□□ -0.48
CPNE4-210ENST00000512332 CENPQQ7L2Z9 268 aaPredicted RBP12.07□□□□□ -0.48
CPNE4-210ENST00000512332 CGNL1Q0VF96 1302 aa12.07□□□□□ -0.48
CPNE4-210ENST00000512332 ANKRD36BQ8N2N9 1353 aa12.06□□□□□ -0.48
CPNE4-210ENST00000512332 NINLQ9Y2I6 1382 aa12.06□□□□□ -0.48
CPNE4-210ENST00000512332 ARHGEF28Q8N1W1 1705 aaKnown RBP12.06□□□□□ -0.48
CPNE4-210ENST00000512332 SPINK5Q9NQ38 1064 aaPredicted RBP12.06□□□□□ -0.48
CPNE4-210ENST00000512332 SHPRHQ149N8 1683 aa12.05□□□□□ -0.48
CPNE4-210ENST00000512332 IDI1Q13907 227 aa12.05□□□□□ -0.48
CPNE4-210ENST00000512332 WWC1Q8IX03 1113 aa12.05□□□□□ -0.48
CPNE4-210ENST00000512332 RUNDC1Q96C34 613 aa12.05□□□□□ -0.48
CPNE4-210ENST00000512332 ZBTB47Q9UFB7 747 aaPredicted RBP12.05□□□□□ -0.48
CPNE4-210ENST00000512332 TULP4Q9NRJ4 1543 aa12.04□□□□□ -0.48
CPNE4-210ENST00000512332 PAK3O75914 559 aaPredicted RBP12.03□□□□□ -0.48
CPNE4-210ENST00000512332 PDE3AQ14432 1141 aa12.03□□□□□ -0.48
CPNE4-210ENST00000512332 CCDC27Q2M243 656 aa12.03□□□□□ -0.48
CPNE4-210ENST00000512332 CFAP53Q96M91 514 aa12.03□□□□□ -0.48
CPNE4-210ENST00000512332 YEATS2Q9ULM3 1422 aa12.02□□□□□ -0.48
CPNE4-210ENST00000512332 WDR63Q8IWG1 891 aa12.02□□□□□ -0.48
CPNE4-210ENST00000512332 IQSEC2Q5JU85 1478 aa12.02□□□□□ -0.48
CPNE4-210ENST00000512332 PPP6R1Q9UPN7 881 aa12.02□□□□□ -0.49
CPNE4-210ENST00000512332 TMEM131LA2VDJ0 1609 aa12.01□□□□□ -0.49
CPNE4-210ENST00000512332 MTHFSP49914 203 aa12.01□□□□□ -0.49
CPNE4-210ENST00000512332 AAMPQ13685 434 aa12.01□□□□□ -0.49
CPNE4-210ENST00000512332 DMRT2Q9Y5R5 561 aa12.01□□□□□ -0.49
CPNE4-210ENST00000512332 PREX1Q8TCU6 1659 aa12□□□□□ -0.49
CPNE4-210ENST00000512332 ABCC11Q96J66 1382 aa12□□□□□ -0.49
CPNE4-210ENST00000512332 BCAR3O75815 825 aa11.99□□□□□ -0.49
CPNE4-210ENST00000512332 TCP11L2Q8N4U5 519 aa11.99□□□□□ -0.49
CPNE4-210ENST00000512332 ATAD2Q6PL18 1390 aa11.99□□□□□ -0.49
CPNE4-210ENST00000512332 MED14O60244 1454 aa11.99□□□□□ -0.49
CPNE4-210ENST00000512332 PTPRMP28827 1452 aa11.98□□□□□ -0.49
CPNE4-210ENST00000512332 REREQ9P2R6 1566 aa11.98□□□□□ -0.49
CPNE4-210ENST00000512332 NUTM2DQ5VT03 806 aaPredicted RBP11.98□□□□□ -0.49
CPNE4-210ENST00000512332 CABP2Q9NPB3 220 aa11.98□□□□□ -0.49
CPNE4-210ENST00000512332 TNNT2P45379 298 aaPredicted RBP11.97□□□□□ -0.49
CPNE4-210ENST00000512332 CLTCQ00610 1675 aaKnown RBP11.97□□□□□ -0.49
CPNE4-210ENST00000512332 AGLP35573 1532 aa11.97□□□□□ -0.49
CPNE4-210ENST00000512332 YTHDC2Q9H6S0 1430 aaKnown RBP11.97□□□□□ -0.49
CPNE4-210ENST00000512332 A0A1W2PP64 1363 aa11.96□□□□□ -0.49
CPNE4-210ENST00000512332 FAM161AQ3B820 660 aa11.96□□□□□ -0.49
CPNE4-210ENST00000512332 DDRGK1Q96HY6 314 aa11.96□□□□□ -0.49
CPNE4-210ENST00000512332 TERF2IPQ9NYB0 399 aa11.96□□□□□ -0.49
CPNE4-210ENST00000512332 MYO5BQ9ULV0 1848 aa11.95□□□□□ -0.5
CPNE4-210ENST00000512332 RARSP54136 660 aaKnown RBP11.95□□□□□ -0.5
CPNE4-210ENST00000512332 ADGRB2O60241 1585 aa11.95□□□□□ -0.5
CPNE4-210ENST00000512332 CT47B1P0C2W7 299 aaPredicted RBP11.95□□□□□ -0.5
CPNE4-210ENST00000512332 MYH16Q9H6N6 1097 aa11.94□□□□□ -0.5
CPNE4-210ENST00000512332 ALKQ9UM73 1620 aa11.94□□□□□ -0.5
CPNE4-210ENST00000512332 SRPK2P78362 688 aaKnown RBP11.94□□□□□ -0.5
CPNE4-210ENST00000512332 NPM2Q86SE8 214 aaKnown RBP11.94□□□□□ -0.5
CPNE4-210ENST00000512332 CLUAP1Q96AJ1 413 aa11.94□□□□□ -0.5
CPNE4-210ENST00000512332 NLRP1Q9C000 1473 aa11.93□□□□□ -0.5
CPNE4-210ENST00000512332 CD163L1Q9NR16 1453 aa11.93□□□□□ -0.5
CPNE4-210ENST00000512332 U2AF1L5P0DN76 240 aaPredicted RBP11.92□□□□□ -0.5
CPNE4-210ENST00000512332 U2AF1Q01081 240 aaKnown RBP eCLIP11.92□□□□□ -0.5
CPNE4-210ENST00000512332 C8orf34Q49A92 452 aa11.92□□□□□ -0.5
CPNE4-210ENST00000512332 SKAP1Q86WV1 359 aa11.92□□□□□ -0.5
CPNE4-210ENST00000512332 PRAM1Q96QH2 718 aa11.92□□□□□ -0.5
CPNE4-210ENST00000512332 STK26Q9P289 416 aa11.92□□□□□ -0.5
CPNE4-210ENST00000512332 ARHGEF40Q8TER5 1519 aa11.92□□□□□ -0.5
CPNE4-210ENST00000512332 DLC1Q96QB1 1528 aa11.92□□□□□ -0.5
CPNE4-210ENST00000512332 ANKRD26Q9UPS8 1709 aa11.92□□□□□ -0.5
CPNE4-210ENST00000512332 COL3A1P02461 1466 aaPredicted RBP11.92□□□□□ -0.5
CPNE4-210ENST00000512332 FYB1O15117 783 aa11.92□□□□□ -0.5
CPNE4-210ENST00000512332 NEUROD2Q15784 382 aa11.92□□□□□ -0.5
CPNE4-210ENST00000512332 POGKQ9P215 609 aa11.92□□□□□ -0.5
CPNE4-210ENST00000512332 RRP7AQ9Y3A4 280 aaKnown RBP11.92□□□□□ -0.5
CPNE4-210ENST00000512332 FBXO31Q5XUX0 539 aaPredicted RBP11.91□□□□□ -0.5
CPNE4-210ENST00000512332 CYB5RLQ6IPT4 315 aa11.91□□□□□ -0.5
CPNE4-210ENST00000512332 PLEKHF1Q96S99 279 aa11.91□□□□□ -0.5
CPNE4-210ENST00000512332 PNPLA6Q8IY17 1366 aa11.91□□□□□ -0.5
CPNE4-210ENST00000512332 DIP2BQ9P265 1576 aa11.91□□□□□ -0.5
CPNE4-210ENST00000512332 CANXP27824 592 aaKnown RBP11.91□□□□□ -0.5
CPNE4-210ENST00000512332 FAM69CQ0P6D2 419 aa11.91□□□□□ -0.5
CPNE4-210ENST00000512332 SAFB2Q14151 953 aaKnown RBP eCLIP11.91□□□□□ -0.5
CPNE4-210ENST00000512332 USP35Q9P2H5 1018 aa11.91□□□□□ -0.5
CPNE4-210ENST00000512332 SPATA31D1Q6ZQQ2 1576 aa11.9□□□□□ -0.5
CPNE4-210ENST00000512332 IGHDP01880 384 aa11.9□□□□□ -0.5
CPNE4-210ENST00000512332 HDGFL2Q7Z4V5 671 aaPredicted RBP11.9□□□□□ -0.5
CPNE4-210ENST00000512332 PNNQ9H307 717 aaKnown RBP11.9□□□□□ -0.5
CPNE4-210ENST00000512332 IL16Q14005 1332 aa11.9□□□□□ -0.5
CPNE4-210ENST00000512332 MAPK8IP3Q9UPT6 1336 aa11.9□□□□□ -0.5
CPNE4-210ENST00000512332 ZMYM3Q14202 1370 aa11.9□□□□□ -0.5
CPNE4-210ENST00000512332 PANK1Q8TE04 598 aa11.9□□□□□ -0.51
CPNE4-210ENST00000512332 MINK1Q8N4C8 1332 aaPredicted RBP11.89□□□□□ -0.51
CPNE4-210ENST00000512332 PMFBP1Q8TBY8 1022 aa11.89□□□□□ -0.51
CPNE4-210ENST00000512332 CDK19Q9BWU1 502 aa11.89□□□□□ -0.51
CPNE4-210ENST00000512332 COG6Q9Y2V7 657 aa11.89□□□□□ -0.51
CPNE4-210ENST00000512332 A2ML1A8K2U0 1454 aa11.89□□□□□ -0.51
CPNE4-210ENST00000512332 PPM1GO15355 546 aaPredicted RBP11.88□□□□□ -0.51
CPNE4-210ENST00000512332 NBR1Q14596 966 aa11.88□□□□□ -0.51
CPNE4-210ENST00000512332 GGNBP2Q9H3C7 697 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms