RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 GLI3P10071 1580 aa15.72■□□□□ 0.11
PDLIM5-217ENST00000512274 RALGAPBQ86X10 1494 aa15.71■□□□□ 0.1
PDLIM5-217ENST00000512274 ANKRD50Q9ULJ7 1429 aa15.7■□□□□ 0.1
PDLIM5-217ENST00000512274 YY1P25490 414 aa15.7■□□□□ 0.1
PDLIM5-217ENST00000512274 XPCQ01831 940 aaPredicted RBP15.7■□□□□ 0.1
PDLIM5-217ENST00000512274 MYOM2P54296 1465 aa15.7■□□□□ 0.1
PDLIM5-217ENST00000512274 ZNF326Q5BKZ1 582 aaKnown RBP15.69■□□□□ 0.1
PDLIM5-217ENST00000512274 UNC5CLQ8IV45 518 aa15.68■□□□□ 0.1
PDLIM5-217ENST00000512274 SEPT12Q8IYM1 358 aa15.68■□□□□ 0.1
PDLIM5-217ENST00000512274 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.68■□□□□ 0.1
PDLIM5-217ENST00000512274 ADGRL2O95490 1459 aa15.66■□□□□ 0.1
PDLIM5-217ENST00000512274 SPHKAPQ2M3C7 1700 aa15.66■□□□□ 0.1
PDLIM5-217ENST00000512274 BAG6P46379 1132 aa15.66■□□□□ 0.1
PDLIM5-217ENST00000512274 R3HDM1Q15032 1099 aaKnown RBP15.65■□□□□ 0.1
PDLIM5-217ENST00000512274 ESCO1Q5FWF5 840 aa15.65■□□□□ 0.1
PDLIM5-217ENST00000512274 FAM50AQ14320 339 aaKnown RBP15.64■□□□□ 0.09
PDLIM5-217ENST00000512274 CCDC9Q9Y3X0 531 aaKnown RBP15.64■□□□□ 0.09
PDLIM5-217ENST00000512274 FOXO3O43524 673 aa15.63■□□□□ 0.09
PDLIM5-217ENST00000512274 EN1Q05925 392 aaPredicted RBP15.63■□□□□ 0.09
PDLIM5-217ENST00000512274 KRT27Q7Z3Y8 459 aa15.63■□□□□ 0.09
PDLIM5-217ENST00000512274 IQGAP3Q86VI3 1631 aa15.63■□□□□ 0.09
PDLIM5-217ENST00000512274 NPHP3Q7Z494 1330 aa15.63■□□□□ 0.09
PDLIM5-217ENST00000512274 A0A0G2JS52 829 aa15.62■□□□□ 0.09
PDLIM5-217ENST00000512274 PLEKHG5O94827 1062 aa15.62■□□□□ 0.09
PDLIM5-217ENST00000512274 MYT1Q01538 1121 aa15.62■□□□□ 0.09
PDLIM5-217ENST00000512274 SLIT2O94813 1529 aa15.62■□□□□ 0.09
PDLIM5-217ENST00000512274 ROBO2Q9HCK4 1378 aa15.62■□□□□ 0.09
PDLIM5-217ENST00000512274 PXDNQ92626 1479 aa15.61■□□□□ 0.09
PDLIM5-217ENST00000512274 NUTM2FA1L443 756 aa15.59■□□□□ 0.09
PDLIM5-217ENST00000512274 HAP1P54257 671 aaPredicted RBP15.58■□□□□ 0.08
PDLIM5-217ENST00000512274 FAM182BQ5T319 152 aa15.57■□□□□ 0.08
PDLIM5-217ENST00000512274 VPS72Q15906 364 aa15.56■□□□□ 0.08
PDLIM5-217ENST00000512274 USP32Q8NFA0 1604 aa15.56■□□□□ 0.08
PDLIM5-217ENST00000512274 PLCH1Q4KWH8 1693 aa15.55■□□□□ 0.08
PDLIM5-217ENST00000512274 NEXMIFQ5QGS0 1516 aa15.55■□□□□ 0.08
PDLIM5-217ENST00000512274 NUP155O75694 1391 aa15.55■□□□□ 0.08
PDLIM5-217ENST00000512274 ONECUT3O60422 494 aaPredicted RBP15.54■□□□□ 0.08
PDLIM5-217ENST00000512274 CABLES1Q8TDN4 633 aa15.54■□□□□ 0.08
PDLIM5-217ENST00000512274 RGPD1P0DJD0 1748 aa15.54■□□□□ 0.08
PDLIM5-217ENST00000512274 EZH2Q15910 746 aaKnown RBP15.53■□□□□ 0.08
PDLIM5-217ENST00000512274 LRPPRCP42704 1394 aaKnown RBP15.52■□□□□ 0.08
PDLIM5-217ENST00000512274 SPATA31A3Q5VYP0 1347 aa15.52■□□□□ 0.08
PDLIM5-217ENST00000512274 ITGAEP38570 1179 aa15.52■□□□□ 0.08
PDLIM5-217ENST00000512274 FAM98CQ17RN3 349 aaKnown RBP15.52■□□□□ 0.08
PDLIM5-217ENST00000512274 ZEB1P37275 1124 aaPredicted RBP15.51■□□□□ 0.07
PDLIM5-217ENST00000512274 NWD2Q9ULI1 1742 aa15.5■□□□□ 0.07
PDLIM5-217ENST00000512274 HFM1A2PYH4 1435 aa15.5■□□□□ 0.07
PDLIM5-217ENST00000512274 CLTCL1P53675 1640 aa15.5■□□□□ 0.07
PDLIM5-217ENST00000512274 KIF1BO60333 1816 aa15.5■□□□□ 0.07
PDLIM5-217ENST00000512274 KRT28Q7Z3Y7 464 aa15.49■□□□□ 0.07
PDLIM5-217ENST00000512274 CDC42BPGQ6DT37 1551 aa15.49■□□□□ 0.07
PDLIM5-217ENST00000512274 CLSPNQ9HAW4 1339 aa15.48■□□□□ 0.07
PDLIM5-217ENST00000512274 DCAF8L1A6NGE4 600 aa15.48■□□□□ 0.07
PDLIM5-217ENST00000512274 LMOD2Q6P5Q4 547 aa15.48■□□□□ 0.07
PDLIM5-217ENST00000512274 TNS1Q9HBL0 1735 aaKnown RBP15.48■□□□□ 0.07
PDLIM5-217ENST00000512274 ACIN1Q9UKV3 1341 aaKnown RBP15.47■□□□□ 0.07
PDLIM5-217ENST00000512274 NAIPQ13075 1403 aa15.47■□□□□ 0.07
PDLIM5-217ENST00000512274 PPP1R1BQ9UD71 204 aaPredicted RBP15.47■□□□□ 0.07
PDLIM5-217ENST00000512274 ROCK1Q13464 1354 aa15.47■□□□□ 0.07
PDLIM5-217ENST00000512274 VGFO15240 615 aaPredicted RBP15.46■□□□□ 0.07
PDLIM5-217ENST00000512274 IFFO2Q5TF58 517 aa15.46■□□□□ 0.07
PDLIM5-217ENST00000512274 SENP3-EIF4A1A0A087X0R7 540 aa15.45■□□□□ 0.06
PDLIM5-217ENST00000512274 FAM83GA6ND36 823 aa15.45■□□□□ 0.06
PDLIM5-217ENST00000512274 WAPLQ7Z5K2 1190 aa15.45■□□□□ 0.06
PDLIM5-217ENST00000512274 CAMTA1Q9Y6Y1 1673 aa15.44■□□□□ 0.06
PDLIM5-217ENST00000512274 RGPD8O14715 1765 aaPredicted RBP15.44■□□□□ 0.06
PDLIM5-217ENST00000512274 ABCA3Q99758 1704 aa15.44■□□□□ 0.06
PDLIM5-217ENST00000512274 TRIM37O94972 964 aa15.44■□□□□ 0.06
PDLIM5-217ENST00000512274 CAMKK2Q96RR4 588 aa15.44■□□□□ 0.06
PDLIM5-217ENST00000512274 STK26Q9P289 416 aa15.44■□□□□ 0.06
PDLIM5-217ENST00000512274 CCDC144AA2RUR9 1427 aa15.43■□□□□ 0.06
PDLIM5-217ENST00000512274 NRAPQ86VF7 1730 aa15.43■□□□□ 0.06
PDLIM5-217ENST00000512274 BTG4Q9NY30 223 aa15.42■□□□□ 0.06
PDLIM5-217ENST00000512274 DISP2A7MBM2 1401 aa15.42■□□□□ 0.06
PDLIM5-217ENST00000512274 TNS3Q68CZ2 1445 aa15.42■□□□□ 0.06
PDLIM5-217ENST00000512274 PRAG1Q86YV5 1406 aa15.42■□□□□ 0.06
PDLIM5-217ENST00000512274 KIF1AQ12756 1690 aa15.41■□□□□ 0.06
PDLIM5-217ENST00000512274 FMN2Q9NZ56 1722 aa15.41■□□□□ 0.06
PDLIM5-217ENST00000512274 APBA3O96018 575 aa15.41■□□□□ 0.06
PDLIM5-217ENST00000512274 PSME1Q06323 249 aa15.4■□□□□ 0.06
PDLIM5-217ENST00000512274 ZNF784Q8NCA9 323 aaPredicted RBP15.39■□□□□ 0.05
PDLIM5-217ENST00000512274 SPON1Q9HCB6 807 aa15.39■□□□□ 0.05
PDLIM5-217ENST00000512274 RAB3GAP2Q9H2M9 1393 aa15.38■□□□□ 0.05
PDLIM5-217ENST00000512274 PLEKHH1Q9ULM0 1364 aa15.38■□□□□ 0.05
PDLIM5-217ENST00000512274 ADGRB2O60241 1585 aa15.38■□□□□ 0.05
PDLIM5-217ENST00000512274 NUP188Q5SRE5 1749 aa15.37■□□□□ 0.05
PDLIM5-217ENST00000512274 PPLO60437 1756 aa15.37■□□□□ 0.05
PDLIM5-217ENST00000512274 KCNQ2O43526 872 aa15.37■□□□□ 0.05
PDLIM5-217ENST00000512274 NBPF8Q3BBV2 869 aa15.37■□□□□ 0.05
PDLIM5-217ENST00000512274 NBPF14Q5TI25 921 aa15.37■□□□□ 0.05
PDLIM5-217ENST00000512274 PHF8Q9UPP1 1060 aa15.37■□□□□ 0.05
PDLIM5-217ENST00000512274 RREB1Q92766 1687 aa15.37■□□□□ 0.05
PDLIM5-217ENST00000512274 DHX57Q6P158 1386 aaKnown RBP15.36■□□□□ 0.05
PDLIM5-217ENST00000512274 THSD7AQ9UPZ6 1657 aa15.35■□□□□ 0.05
PDLIM5-217ENST00000512274 SPATA31A5Q5VU36 1347 aa15.35■□□□□ 0.05
PDLIM5-217ENST00000512274 SPATA31A7Q8IWB4 1347 aa15.35■□□□□ 0.05
PDLIM5-217ENST00000512274 FAM196AQ6ZSG2 479 aa15.34■□□□□ 0.05
PDLIM5-217ENST00000512274 NINLQ9Y2I6 1382 aa15.34■□□□□ 0.05
PDLIM5-217ENST00000512274 IFT172Q9UG01 1749 aa15.34■□□□□ 0.05
PDLIM5-217ENST00000512274 COL14A1Q05707 1796 aaKnown RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms