RNA–Protein interactions for RNA: ENST00000511891.5

COPS4-211, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2

Gene COPS4, Length 558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-211ENST00000511891 ASXL1Q8IXJ9 1541 aa14.62□□□□□ -0.07
COPS4-211ENST00000511891 TMEM132EQ6IEE7 984 aa14.62□□□□□ -0.07
COPS4-211ENST00000511891 DDX17Q92841 729 aaKnown RBP14.62□□□□□ -0.07
COPS4-211ENST00000511891 STK26Q9P289 416 aa14.62□□□□□ -0.07
COPS4-211ENST00000511891 IFT172Q9UG01 1749 aa14.62□□□□□ -0.07
COPS4-211ENST00000511891 PIK3C2GO75747 1445 aa14.6□□□□□ -0.07
COPS4-211ENST00000511891 PRAG1Q86YV5 1406 aa14.6□□□□□ -0.07
COPS4-211ENST00000511891 C1orf167Q5SNV9 1468 aa14.59□□□□□ -0.07
COPS4-211ENST00000511891 POTEAQ6S8J7 498 aa14.59□□□□□ -0.07
COPS4-211ENST00000511891 WAPLQ7Z5K2 1190 aa14.59□□□□□ -0.07
COPS4-211ENST00000511891 RBM42Q9BTD8 480 aaKnown RBP14.58□□□□□ -0.08
COPS4-211ENST00000511891 LRP6O75581 1613 aa14.58□□□□□ -0.08
COPS4-211ENST00000511891 LRPPRCP42704 1394 aaKnown RBP14.58□□□□□ -0.08
COPS4-211ENST00000511891 ORAI2Q96SN7 254 aa14.57□□□□□ -0.08
COPS4-211ENST00000511891 PLEKHH1Q9ULM0 1364 aa14.57□□□□□ -0.08
COPS4-211ENST00000511891 NHSL1Q5SYE7 1610 aa14.56□□□□□ -0.08
COPS4-211ENST00000511891 NUTM2BA6NNL0 878 aaPredicted RBP14.56□□□□□ -0.08
COPS4-211ENST00000511891 NUTM2EB1AL46 878 aaPredicted RBP14.56□□□□□ -0.08
COPS4-211ENST00000511891 HRCP23327 699 aa14.56□□□□□ -0.08
COPS4-211ENST00000511891 CFAP70Q5T0N1 1121 aa14.56□□□□□ -0.08
COPS4-211ENST00000511891 NUTM2AQ8IVF1 878 aaPredicted RBP14.56□□□□□ -0.08
COPS4-211ENST00000511891 C14orf93Q9H972 538 aaKnown RBP14.56□□□□□ -0.08
COPS4-211ENST00000511891 SPATA31A6Q5VVP1 1343 aa14.56□□□□□ -0.08
COPS4-211ENST00000511891 MEX3CQ5U5Q3 659 aaKnown RBP14.55□□□□□ -0.08
COPS4-211ENST00000511891 ABCC11Q96J66 1382 aa14.55□□□□□ -0.08
COPS4-211ENST00000511891 TECPR2O15040 1411 aa14.55□□□□□ -0.08
COPS4-211ENST00000511891 YTHDC2Q9H6S0 1430 aaKnown RBP14.55□□□□□ -0.08
COPS4-211ENST00000511891 MYOM2P54296 1465 aa14.55□□□□□ -0.08
COPS4-211ENST00000511891 NRXN1Q9ULB1 1477 aa14.55□□□□□ -0.08
COPS4-211ENST00000511891 SHPRHQ149N8 1683 aa14.55□□□□□ -0.08
COPS4-211ENST00000511891 NUTM2FA1L443 756 aa14.53□□□□□ -0.08
COPS4-211ENST00000511891 CHRDL2Q6WN34 429 aa14.53□□□□□ -0.08
COPS4-211ENST00000511891 LRRC59Q96AG4 307 aaKnown RBP14.53□□□□□ -0.08
COPS4-211ENST00000511891 KDM2AQ9Y2K7 1162 aa14.53□□□□□ -0.08
COPS4-211ENST00000511891 KNDC1Q76NI1 1749 aa14.52□□□□□ -0.09
COPS4-211ENST00000511891 CDC42BPGQ6DT37 1551 aa14.51□□□□□ -0.09
COPS4-211ENST00000511891 PNPLA6Q8IY17 1366 aa14.51□□□□□ -0.09
COPS4-211ENST00000511891 ESCO1Q5FWF5 840 aa14.51□□□□□ -0.09
COPS4-211ENST00000511891 DCAF11Q8TEB1 546 aa14.51□□□□□ -0.09
COPS4-211ENST00000511891 DHX57Q6P158 1386 aaKnown RBP14.5□□□□□ -0.09
COPS4-211ENST00000511891 SAFB2Q14151 953 aaKnown RBP eCLIP14.5□□□□□ -0.09
COPS4-211ENST00000511891 SOS2Q07890 1332 aaPredicted RBP14.49□□□□□ -0.09
COPS4-211ENST00000511891 XPCQ01831 940 aaPredicted RBP14.48□□□□□ -0.09
COPS4-211ENST00000511891 SAMD1Q6SPF0 538 aaPredicted RBP14.48□□□□□ -0.09
COPS4-211ENST00000511891 SIRT1Q96EB6 747 aa14.48□□□□□ -0.09
COPS4-211ENST00000511891 PRAM1Q96QH2 718 aa14.48□□□□□ -0.09
COPS4-211ENST00000511891 LAMC1P11047 1609 aa14.48□□□□□ -0.09
COPS4-211ENST00000511891 FOXO3O43524 673 aa14.47□□□□□ -0.09
COPS4-211ENST00000511891 KCNA4P22459 653 aa14.47□□□□□ -0.09
COPS4-211ENST00000511891 TRAK1Q9UPV9 953 aa14.46□□□□□ -0.09
COPS4-211ENST00000511891 ADGRB1O14514 1584 aa14.46□□□□□ -0.09
COPS4-211ENST00000511891 AFF2P51816 1311 aa14.45□□□□□ -0.1
COPS4-211ENST00000511891 NPHP3Q7Z494 1330 aa14.45□□□□□ -0.1
COPS4-211ENST00000511891 ADAMTS2O95450 1211 aa14.45□□□□□ -0.1
COPS4-211ENST00000511891 ZNF772Q68DY9 489 aaPredicted RBP14.45□□□□□ -0.1
COPS4-211ENST00000511891 C8orf37Q96NL8 207 aa14.45□□□□□ -0.1
COPS4-211ENST00000511891 POGKQ9P215 609 aa14.45□□□□□ -0.1
COPS4-211ENST00000511891 FMN2Q9NZ56 1722 aa14.44□□□□□ -0.1
COPS4-211ENST00000511891 PXDNQ92626 1479 aa14.44□□□□□ -0.1
COPS4-211ENST00000511891 DLC1Q96QB1 1528 aa14.43□□□□□ -0.1
COPS4-211ENST00000511891 HIRIP3Q9BW71 556 aaPredicted RBP14.42□□□□□ -0.1
COPS4-211ENST00000511891 STAC3Q96MF2 364 aa14.41□□□□□ -0.1
COPS4-211ENST00000511891 MINK1Q8N4C8 1332 aaPredicted RBP14.41□□□□□ -0.1
COPS4-211ENST00000511891 NGLY1Q96IV0 654 aa14.4□□□□□ -0.1
COPS4-211ENST00000511891 PHF8Q9UPP1 1060 aa14.4□□□□□ -0.1
COPS4-211ENST00000511891 RGPD8O14715 1765 aaPredicted RBP14.39□□□□□ -0.11
COPS4-211ENST00000511891 RXRBP28702 533 aa14.39□□□□□ -0.11
COPS4-211ENST00000511891 KRT28Q7Z3Y7 464 aa14.39□□□□□ -0.11
COPS4-211ENST00000511891 COL22A1Q8NFW1 1626 aaPredicted RBP14.38□□□□□ -0.11
COPS4-211ENST00000511891 KIF1AQ12756 1690 aa14.37□□□□□ -0.11
COPS4-211ENST00000511891 PMFBP1Q8TBY8 1022 aa14.37□□□□□ -0.11
COPS4-211ENST00000511891 QTRT2Q9H974 415 aaKnown RBP14.37□□□□□ -0.11
COPS4-211ENST00000511891 SPATA31A3Q5VYP0 1347 aa14.37□□□□□ -0.11
COPS4-211ENST00000511891 ADGRB2O60241 1585 aa14.36□□□□□ -0.11
COPS4-211ENST00000511891 PLEKHG5O94827 1062 aa14.36□□□□□ -0.11
COPS4-211ENST00000511891 SIN3AQ96ST3 1273 aa14.36□□□□□ -0.11
COPS4-211ENST00000511891 USP32Q8NFA0 1604 aa14.36□□□□□ -0.11
COPS4-211ENST00000511891 PRR36Q9H6K5 1346 aa14.36□□□□□ -0.11
COPS4-211ENST00000511891 NBPF1Q3BBV0 1214 aa14.35□□□□□ -0.11
COPS4-211ENST00000511891 ANKARQ7Z5J8 1434 aa14.34□□□□□ -0.11
COPS4-211ENST00000511891 WASLO00401 505 aaPredicted RBP14.34□□□□□ -0.11
COPS4-211ENST00000511891 POLA2Q14181 598 aa14.34□□□□□ -0.11
COPS4-211ENST00000511891 USP21Q9UK80 565 aa14.34□□□□□ -0.11
COPS4-211ENST00000511891 ARHGEF28Q8N1W1 1705 aaKnown RBP14.33□□□□□ -0.12
COPS4-211ENST00000511891 PSME1Q06323 249 aa14.33□□□□□ -0.12
COPS4-211ENST00000511891 LMOD2Q6P5Q4 547 aa14.33□□□□□ -0.12
COPS4-211ENST00000511891 TNS3Q68CZ2 1445 aa14.32□□□□□ -0.12
COPS4-211ENST00000511891 RBM6P78332 1123 aaKnown RBP14.32□□□□□ -0.12
COPS4-211ENST00000511891 NEUROD1Q13562 356 aa14.32□□□□□ -0.12
COPS4-211ENST00000511891 FNBP4Q8N3X1 1017 aaPredicted RBP14.32□□□□□ -0.12
COPS4-211ENST00000511891 SP7Q8TDD2 431 aaPredicted RBP14.32□□□□□ -0.12
COPS4-211ENST00000511891 CABLES1Q8TDN4 633 aa14.32□□□□□ -0.12
COPS4-211ENST00000511891 L3MBTL2Q969R5 705 aa14.32□□□□□ -0.12
COPS4-211ENST00000511891 TULP4Q9NRJ4 1543 aa14.31□□□□□ -0.12
COPS4-211ENST00000511891 SBNO1A3KN83 1393 aa14.31□□□□□ -0.12
COPS4-211ENST00000511891 RGS12O14924 1447 aa14.31□□□□□ -0.12
COPS4-211ENST00000511891 CDK12Q9NYV4 1490 aaPredicted RBP14.31□□□□□ -0.12
COPS4-211ENST00000511891 TRPC5Q9UL62 973 aaPredicted RBP14.3□□□□□ -0.12
COPS4-211ENST00000511891 EIF3AQ14152 1382 aaKnown RBP14.3□□□□□ -0.12
COPS4-211ENST00000511891 KIAA1210Q9ULL0 1709 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms