RNA–Protein interactions for RNA: ENST00000511807.1

UBE2B-208, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 3

Gene UBE2B, Length 818 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-208ENST00000511807 STK26Q9P289 416 aa16.6■□□□□ 0.25
UBE2B-208ENST00000511807 PRAG1Q86YV5 1406 aa16.6■□□□□ 0.25
UBE2B-208ENST00000511807 ADAMTS2O95450 1211 aa16.59■□□□□ 0.25
UBE2B-208ENST00000511807 SOS2Q07890 1332 aaPredicted RBP16.58■□□□□ 0.24
UBE2B-208ENST00000511807 PPLO60437 1756 aa16.58■□□□□ 0.24
UBE2B-208ENST00000511807 ANKRD30BQ9BXX2 1392 aa16.57■□□□□ 0.24
UBE2B-208ENST00000511807 ESCO1Q5FWF5 840 aa16.57■□□□□ 0.24
UBE2B-208ENST00000511807 PPP4R3CPQ6ZMV5 832 aa16.57■□□□□ 0.24
UBE2B-208ENST00000511807 NGLY1Q96IV0 654 aa16.57■□□□□ 0.24
UBE2B-208ENST00000511807 SPATA31E1Q6ZUB1 1445 aa16.56■□□□□ 0.24
UBE2B-208ENST00000511807 UPF1Q92900 1129 aaKnown RBP eCLIP16.56■□□□□ 0.24
UBE2B-208ENST00000511807 QTRT2Q9H974 415 aaKnown RBP16.56■□□□□ 0.24
UBE2B-208ENST00000511807 TMEM132EQ6IEE7 984 aa16.55■□□□□ 0.24
UBE2B-208ENST00000511807 WAPLQ7Z5K2 1190 aa16.55■□□□□ 0.24
UBE2B-208ENST00000511807 NUTM2FA1L443 756 aa16.54■□□□□ 0.24
UBE2B-208ENST00000511807 CDK12Q9NYV4 1490 aaPredicted RBP16.54■□□□□ 0.24
UBE2B-208ENST00000511807 LRPPRCP42704 1394 aaKnown RBP16.53■□□□□ 0.24
UBE2B-208ENST00000511807 RBM6P78332 1123 aaKnown RBP16.53■□□□□ 0.24
UBE2B-208ENST00000511807 CDC42BPGQ6DT37 1551 aa16.52■□□□□ 0.24
UBE2B-208ENST00000511807 NPHP3Q7Z494 1330 aa16.52■□□□□ 0.24
UBE2B-208ENST00000511807 FOXO3O43524 673 aa16.52■□□□□ 0.24
UBE2B-208ENST00000511807 XPCQ01831 940 aaPredicted RBP16.52■□□□□ 0.24
UBE2B-208ENST00000511807 LAMC1P11047 1609 aa16.52■□□□□ 0.23
UBE2B-208ENST00000511807 TECPR2O15040 1411 aa16.51■□□□□ 0.23
UBE2B-208ENST00000511807 PIK3C2GO75747 1445 aa16.51■□□□□ 0.23
UBE2B-208ENST00000511807 ABCC11Q96J66 1382 aa16.51■□□□□ 0.23
UBE2B-208ENST00000511807 PLEKHH1Q9ULM0 1364 aa16.51■□□□□ 0.23
UBE2B-208ENST00000511807 USP21Q9UK80 565 aa16.5■□□□□ 0.23
UBE2B-208ENST00000511807 RGS12O14924 1447 aa16.5■□□□□ 0.23
UBE2B-208ENST00000511807 KCNA4P22459 653 aa16.49■□□□□ 0.23
UBE2B-208ENST00000511807 YTHDC2Q9H6S0 1430 aaKnown RBP16.48■□□□□ 0.23
UBE2B-208ENST00000511807 CCER1Q8TC90 406 aaPredicted RBP16.48■□□□□ 0.23
UBE2B-208ENST00000511807 DHX57Q6P158 1386 aaKnown RBP16.47■□□□□ 0.23
UBE2B-208ENST00000511807 PXDNQ92626 1479 aa16.47■□□□□ 0.23
UBE2B-208ENST00000511807 IFT172Q9UG01 1749 aa16.46■□□□□ 0.23
UBE2B-208ENST00000511807 CFAP70Q5T0N1 1121 aa16.46■□□□□ 0.23
UBE2B-208ENST00000511807 TRPC5Q9UL62 973 aaPredicted RBP16.46■□□□□ 0.23
UBE2B-208ENST00000511807 FNBP4Q8N3X1 1017 aaPredicted RBP16.45■□□□□ 0.22
UBE2B-208ENST00000511807 C14orf93Q9H972 538 aaKnown RBP16.45■□□□□ 0.22
UBE2B-208ENST00000511807 MYOM2P54296 1465 aa16.45■□□□□ 0.22
UBE2B-208ENST00000511807 SAFB2Q14151 953 aaKnown RBP eCLIP16.43■□□□□ 0.22
UBE2B-208ENST00000511807 SIRT1Q96EB6 747 aa16.43■□□□□ 0.22
UBE2B-208ENST00000511807 COL22A1Q8NFW1 1626 aaPredicted RBP16.43■□□□□ 0.22
UBE2B-208ENST00000511807 KNDC1Q76NI1 1749 aa16.42■□□□□ 0.22
UBE2B-208ENST00000511807 CLSPNQ9HAW4 1339 aa16.42■□□□□ 0.22
UBE2B-208ENST00000511807 KRT28Q7Z3Y7 464 aa16.41■□□□□ 0.22
UBE2B-208ENST00000511807 PRAM1Q96QH2 718 aa16.41■□□□□ 0.22
UBE2B-208ENST00000511807 ATRNO75882 1429 aa16.41■□□□□ 0.22
UBE2B-208ENST00000511807 NRXN1Q9ULB1 1477 aa16.41■□□□□ 0.22
UBE2B-208ENST00000511807 POGKQ9P215 609 aa16.4■□□□□ 0.22
UBE2B-208ENST00000511807 PHF8Q9UPP1 1060 aa16.4■□□□□ 0.22
UBE2B-208ENST00000511807 SPATA31A3Q5VYP0 1347 aa16.4■□□□□ 0.22
UBE2B-208ENST00000511807 ATAD2Q6PL18 1390 aa16.39■□□□□ 0.21
UBE2B-208ENST00000511807 FMN2Q9NZ56 1722 aa16.39■□□□□ 0.21
UBE2B-208ENST00000511807 PLEKHG5O94827 1062 aa16.39■□□□□ 0.21
UBE2B-208ENST00000511807 BCL9LQ86UU0 1499 aa16.38■□□□□ 0.21
UBE2B-208ENST00000511807 HAP1P54257 671 aaPredicted RBP16.38■□□□□ 0.21
UBE2B-208ENST00000511807 KDM2AQ9Y2K7 1162 aa16.38■□□□□ 0.21
UBE2B-208ENST00000511807 PSME1Q06323 249 aa16.37■□□□□ 0.21
UBE2B-208ENST00000511807 LMOD2Q6P5Q4 547 aa16.36■□□□□ 0.21
UBE2B-208ENST00000511807 GJD4Q96KN9 370 aaPredicted RBP16.36■□□□□ 0.21
UBE2B-208ENST00000511807 KIF1AQ12756 1690 aa16.36■□□□□ 0.21
UBE2B-208ENST00000511807 CABLES1Q8TDN4 633 aa16.35■□□□□ 0.21
UBE2B-208ENST00000511807 DCAF11Q8TEB1 546 aa16.35■□□□□ 0.21
UBE2B-208ENST00000511807 TRAK1Q9UPV9 953 aa16.35■□□□□ 0.21
UBE2B-208ENST00000511807 UNC5CLQ8IV45 518 aa16.34■□□□□ 0.21
UBE2B-208ENST00000511807 PMFBP1Q8TBY8 1022 aa16.34■□□□□ 0.21
UBE2B-208ENST00000511807 HIRIP3Q9BW71 556 aaPredicted RBP16.34■□□□□ 0.21
UBE2B-208ENST00000511807 TNS3Q68CZ2 1445 aa16.34■□□□□ 0.21
UBE2B-208ENST00000511807 MINK1Q8N4C8 1332 aaPredicted RBP16.32■□□□□ 0.2
UBE2B-208ENST00000511807 DLC1Q96QB1 1528 aa16.32■□□□□ 0.2
UBE2B-208ENST00000511807 ADGRB1O14514 1584 aa16.31■□□□□ 0.2
UBE2B-208ENST00000511807 ANKARQ7Z5J8 1434 aa16.31■□□□□ 0.2
UBE2B-208ENST00000511807 SLIT2O94813 1529 aa16.3■□□□□ 0.2
UBE2B-208ENST00000511807 SBNO1A3KN83 1393 aa16.3■□□□□ 0.2
UBE2B-208ENST00000511807 ARHGEF10O15013 1369 aa16.3■□□□□ 0.2
UBE2B-208ENST00000511807 USP32Q8NFA0 1604 aa16.3■□□□□ 0.2
UBE2B-208ENST00000511807 RALGAPBQ86X10 1494 aa16.29■□□□□ 0.2
UBE2B-208ENST00000511807 MARF1Q9Y4F3 1742 aaKnown RBP16.29■□□□□ 0.2
UBE2B-208ENST00000511807 CCDC9Q9Y3X0 531 aaKnown RBP16.29■□□□□ 0.2
UBE2B-208ENST00000511807 NEUROD1Q13562 356 aa16.28■□□□□ 0.2
UBE2B-208ENST00000511807 SIN3AQ96ST3 1273 aa16.28■□□□□ 0.2
UBE2B-208ENST00000511807 EIF3AQ14152 1382 aaKnown RBP16.27■□□□□ 0.2
UBE2B-208ENST00000511807 GPRASP1Q5JY77 1395 aa16.26■□□□□ 0.19
UBE2B-208ENST00000511807 ADGRB2O60241 1585 aa16.26■□□□□ 0.19
UBE2B-208ENST00000511807 RGPD8O14715 1765 aaPredicted RBP16.26■□□□□ 0.19
UBE2B-208ENST00000511807 PRR36Q9H6K5 1346 aa16.26■□□□□ 0.19
UBE2B-208ENST00000511807 WASLO00401 505 aaPredicted RBP16.26■□□□□ 0.19
UBE2B-208ENST00000511807 VPS72Q15906 364 aa16.26■□□□□ 0.19
UBE2B-208ENST00000511807 CCDC125Q86Z20 511 aa16.26■□□□□ 0.19
UBE2B-208ENST00000511807 STAC3Q96MF2 364 aa16.26■□□□□ 0.19
UBE2B-208ENST00000511807 GLI3P10071 1580 aa16.26■□□□□ 0.19
UBE2B-208ENST00000511807 FAM83GA6ND36 823 aa16.24■□□□□ 0.19
UBE2B-208ENST00000511807 ZEB1P37275 1124 aaPredicted RBP16.24■□□□□ 0.19
UBE2B-208ENST00000511807 SEPT12Q8IYM1 358 aa16.24■□□□□ 0.19
UBE2B-208ENST00000511807 NGDNQ8NEJ9 315 aaKnown RBP16.24■□□□□ 0.19
UBE2B-208ENST00000511807 TIMELESSQ9UNS1 1208 aa16.24■□□□□ 0.19
UBE2B-208ENST00000511807 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.24■□□□□ 0.19
UBE2B-208ENST00000511807 TULP4Q9NRJ4 1543 aa16.24■□□□□ 0.19
UBE2B-208ENST00000511807 PAK3O75914 559 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms