RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 NPHP1O15259 732 aa6.08□□□□□ -1.44
PTPN13-209ENST00000511467 COG3Q96JB2 828 aa6.08□□□□□ -1.44
PTPN13-209ENST00000511467 DDX19BQ9UMR2 479 aa6.08□□□□□ -1.44
PTPN13-209ENST00000511467 CLASP1Q7Z460 1538 aa6.08□□□□□ -1.44
PTPN13-209ENST00000511467 TCHHQ07283 1943 aa6.08□□□□□ -1.44
PTPN13-209ENST00000511467 MYH11P35749 1972 aa6.08□□□□□ -1.44
PTPN13-209ENST00000511467 PDCP20941 246 aa6.07□□□□□ -1.44
PTPN13-209ENST00000511467 TPM2P07951 284 aa6.07□□□□□ -1.44
PTPN13-209ENST00000511467 TRHP20396 242 aaPredicted RBP6.07□□□□□ -1.44
PTPN13-209ENST00000511467 FAM9BQ8IZU0 186 aa6.07□□□□□ -1.44
PTPN13-209ENST00000511467 MTERF4Q7Z6M4 381 aaKnown RBP6.07□□□□□ -1.44
PTPN13-209ENST00000511467 SRCIN1Q9C0H9 1055 aa6.07□□□□□ -1.44
PTPN13-209ENST00000511467 RNF17Q9BXT8 1623 aaKnown RBP6.07□□□□□ -1.44
PTPN13-209ENST00000511467 GAS2L2Q8NHY3 880 aa6.07□□□□□ -1.44
PTPN13-209ENST00000511467 MYH8P13535 1937 aa6.07□□□□□ -1.44
PTPN13-209ENST00000511467 ARHGEF11O15085 1522 aa6.07□□□□□ -1.44
PTPN13-209ENST00000511467 ZCCHC11Q5TAX3 1644 aaKnown RBP6.07□□□□□ -1.44
PTPN13-209ENST00000511467 C1orf141Q5JVX7 400 aa6.06□□□□□ -1.44
PTPN13-209ENST00000511467 CCDC70Q6NSX1 233 aa6.06□□□□□ -1.44
PTPN13-209ENST00000511467 CAMSAP1Q5T5Y3 1602 aa6.06□□□□□ -1.44
PTPN13-209ENST00000511467 KIF3BO15066 747 aa6.06□□□□□ -1.44
PTPN13-209ENST00000511467 CCDC47Q96A33 483 aaKnown RBP6.06□□□□□ -1.44
PTPN13-209ENST00000511467 INO80Q9ULG1 1556 aaPredicted RBP6.06□□□□□ -1.44
PTPN13-209ENST00000511467 DCAF8L1A6NGE4 600 aa6.06□□□□□ -1.44
PTPN13-209ENST00000511467 TPM1P09493 284 aa6.06□□□□□ -1.44
PTPN13-209ENST00000511467 LETM1O95202 739 aaPredicted RBP6.06□□□□□ -1.44
PTPN13-209ENST00000511467 TMED8Q6PL24 325 aaPredicted RBP6.06□□□□□ -1.44
PTPN13-209ENST00000511467 ANKRD20A12PQ8NF67 263 aa6.06□□□□□ -1.44
PTPN13-209ENST00000511467 ZFYVE9O95405 1425 aa6.06□□□□□ -1.44
PTPN13-209ENST00000511467 MSNP26038 577 aaKnown RBP6.06□□□□□ -1.44
PTPN13-209ENST00000511467 PIP4K2AP48426 406 aaPredicted RBP6.06□□□□□ -1.44
PTPN13-209ENST00000511467 CAVIN1Q6NZI2 390 aaKnown RBP6.06□□□□□ -1.44
PTPN13-209ENST00000511467 GTPBP4Q9BZE4 634 aaKnown RBP6.06□□□□□ -1.44
PTPN13-209ENST00000511467 ZNF608Q9ULD9 1512 aaPredicted RBP6.06□□□□□ -1.44
PTPN13-209ENST00000511467 ATP7AQ04656 1500 aa6.06□□□□□ -1.44
PTPN13-209ENST00000511467 ERC2O15083 957 aa6.06□□□□□ -1.44
PTPN13-209ENST00000511467 GNAI1P63096 354 aa6.06□□□□□ -1.44
PTPN13-209ENST00000511467 KDM5BQ9UGL1 1544 aa6.05□□□□□ -1.44
PTPN13-209ENST00000511467 EIF3DO15371 548 aaKnown RBP eCLIP6.05□□□□□ -1.44
PTPN13-209ENST00000511467 KLHL34Q8N239 644 aa6.05□□□□□ -1.44
PTPN13-209ENST00000511467 KCNH5Q8NCM2 988 aa6.05□□□□□ -1.44
PTPN13-209ENST00000511467 KDM5CP41229 1560 aa6.05□□□□□ -1.44
PTPN13-209ENST00000511467 CD109Q6YHK3 1445 aa6.05□□□□□ -1.44
PTPN13-209ENST00000511467 NT5C2P49902 561 aa6.05□□□□□ -1.44
PTPN13-209ENST00000511467 TRPM2O94759 1503 aa6.05□□□□□ -1.44
PTPN13-209ENST00000511467 DHX16O60231 1041 aaKnown RBP6.05□□□□□ -1.44
PTPN13-209ENST00000511467 UNC13BO14795 1591 aa6.05□□□□□ -1.44
PTPN13-209ENST00000511467 PLEKHH1Q9ULM0 1364 aa6.05□□□□□ -1.44
PTPN13-209ENST00000511467 CCP110O43303 1012 aa6.05□□□□□ -1.44
PTPN13-209ENST00000511467 CERS3Q8IU89 383 aa6.05□□□□□ -1.44
PTPN13-209ENST00000511467 MYH7P12883 1935 aa6.04□□□□□ -1.44
PTPN13-209ENST00000511467 FKBP8Q14318 412 aa6.04□□□□□ -1.44
PTPN13-209ENST00000511467 TRAF1Q13077 416 aa6.04□□□□□ -1.44
PTPN13-209ENST00000511467 SYNMO15061 1565 aa6.04□□□□□ -1.44
PTPN13-209ENST00000511467 SLC3A2P08195 630 aaKnown RBP6.04□□□□□ -1.44
PTPN13-209ENST00000511467 ZNF287Q9HBT7 754 aa6.04□□□□□ -1.44
PTPN13-209ENST00000511467 RCAN3Q9UKA8 241 aa6.04□□□□□ -1.44
PTPN13-209ENST00000511467 TTC21BQ7Z4L5 1316 aa6.04□□□□□ -1.44
PTPN13-209ENST00000511467 XBP1P17861 261 aa6.04□□□□□ -1.44
PTPN13-209ENST00000511467 MYO6Q9UM54 1294 aa6.04□□□□□ -1.44
PTPN13-209ENST00000511467 MYH3P11055 1940 aa6.04□□□□□ -1.44
PTPN13-209ENST00000511467 TSR1Q2NL82 804 aaKnown RBP6.04□□□□□ -1.44
PTPN13-209ENST00000511467 SCAF11Q99590 1463 aaKnown RBP6.04□□□□□ -1.44
PTPN13-209ENST00000511467 GNL2Q13823 731 aaKnown RBP6.03□□□□□ -1.44
PTPN13-209ENST00000511467 LOXHD1Q8IVV2 1947 aa6.03□□□□□ -1.44
PTPN13-209ENST00000511467 MYH13Q9UKX3 1938 aa6.03□□□□□ -1.44
PTPN13-209ENST00000511467 ATF3P18847 181 aa6.03□□□□□ -1.44
PTPN13-209ENST00000511467 PLCH2O75038 1416 aa6.03□□□□□ -1.44
PTPN13-209ENST00000511467 TRAPPC8Q9Y2L5 1435 aa6.03□□□□□ -1.44
PTPN13-209ENST00000511467 TICAM2Q86XR7 235 aa6.03□□□□□ -1.44
PTPN13-209ENST00000511467 ZMYM3Q14202 1370 aa6.03□□□□□ -1.44
PTPN13-209ENST00000511467 TRIM21P19474 475 aaKnown RBP6.03□□□□□ -1.44
PTPN13-209ENST00000511467 NPC1L1Q9UHC9 1359 aa6.03□□□□□ -1.44
PTPN13-209ENST00000511467 ASXL1Q8IXJ9 1541 aa6.03□□□□□ -1.44
PTPN13-209ENST00000511467 ANKRD1Q15327 319 aa6.03□□□□□ -1.44
PTPN13-209ENST00000511467 LMOD2Q6P5Q4 547 aa6.03□□□□□ -1.44
PTPN13-209ENST00000511467 ANKRD26Q9UPS8 1709 aa6.03□□□□□ -1.44
PTPN13-209ENST00000511467 NGDNQ8NEJ9 315 aaKnown RBP6.03□□□□□ -1.44
PTPN13-209ENST00000511467 AMPHP49418 695 aa6.02□□□□□ -1.45
PTPN13-209ENST00000511467 RUNDC1Q96C34 613 aa6.02□□□□□ -1.45
PTPN13-209ENST00000511467 TCEAL9Q9UHQ7 104 aa6.02□□□□□ -1.45
PTPN13-209ENST00000511467 FRMPD1Q5SYB0 1578 aa6.02□□□□□ -1.45
PTPN13-209ENST00000511467 SETBP1Q9Y6X0 1596 aa6.02□□□□□ -1.45
PTPN13-209ENST00000511467 ZKSCAN1P17029 563 aaPredicted RBP6.02□□□□□ -1.45
PTPN13-209ENST00000511467 GPS2Q13227 327 aa6.02□□□□□ -1.45
PTPN13-209ENST00000511467 WDR63Q8IWG1 891 aa6.02□□□□□ -1.45
PTPN13-209ENST00000511467 LUC7LQ9NQ29 371 aaKnown RBP6.02□□□□□ -1.45
PTPN13-209ENST00000511467 CCDC88AQ3V6T2 1871 aa6.02□□□□□ -1.45
PTPN13-209ENST00000511467 MICAL3Q7RTP6 2002 aa6.02□□□□□ -1.45
PTPN13-209ENST00000511467 TTC37Q6PGP7 1564 aa6.02□□□□□ -1.45
PTPN13-209ENST00000511467 CAVIN2O95810 425 aa6.02□□□□□ -1.45
PTPN13-209ENST00000511467 MROH2AA6NES4 1674 aa6.02□□□□□ -1.45
PTPN13-209ENST00000511467 A2MP01023 1474 aa6.02□□□□□ -1.45
PTPN13-209ENST00000511467 PDE3AQ14432 1141 aa6.02□□□□□ -1.45
PTPN13-209ENST00000511467 ABCA9Q8IUA7 1624 aa6.02□□□□□ -1.45
PTPN13-209ENST00000511467 FER1L4A9Z1Z3 1794 aa6.02□□□□□ -1.45
PTPN13-209ENST00000511467 RTL1A6NKG5 1358 aa6.02□□□□□ -1.45
PTPN13-209ENST00000511467 PYM1Q9BRP8 204 aaKnown RBP6.02□□□□□ -1.45
PTPN13-209ENST00000511467 PSMA5P28066 241 aa6.01□□□□□ -1.45
PTPN13-209ENST00000511467 ZSCAN25Q6NSZ9 544 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms