RNA–Protein interactions for RNA: ENST00000511313.5

POLR2J3-215, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best) BASIC

Gene POLR2J3, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-215ENST00000511313 MYH16Q9H6N6 1097 aa12.6□□□□□ -0.39
POLR2J3-215ENST00000511313 TRPC5Q9UL62 973 aaPredicted RBP12.6□□□□□ -0.39
POLR2J3-215ENST00000511313 CPS1P31327 1500 aa12.6□□□□□ -0.39
POLR2J3-215ENST00000511313 SPATA31A6Q5VVP1 1343 aa12.6□□□□□ -0.39
POLR2J3-215ENST00000511313 NUTM2FA1L443 756 aa12.6□□□□□ -0.39
POLR2J3-215ENST00000511313 BAG6P46379 1132 aa12.6□□□□□ -0.39
POLR2J3-215ENST00000511313 NUDT16Q96DE0 195 aaKnown RBP12.6□□□□□ -0.39
POLR2J3-215ENST00000511313 CFAP70Q5T0N1 1121 aa12.59□□□□□ -0.39
POLR2J3-215ENST00000511313 SOX12O15370 315 aa12.58□□□□□ -0.39
POLR2J3-215ENST00000511313 MBD5Q9P267 1494 aa12.58□□□□□ -0.39
POLR2J3-215ENST00000511313 SETD1BQ9UPS6 1966 aaKnown RBP12.58□□□□□ -0.4
POLR2J3-215ENST00000511313 MSH5O43196 834 aa12.58□□□□□ -0.4
POLR2J3-215ENST00000511313 TEFQ10587 303 aa12.58□□□□□ -0.4
POLR2J3-215ENST00000511313 PPP1R1BQ9UD71 204 aaPredicted RBP12.58□□□□□ -0.4
POLR2J3-215ENST00000511313 PNISRQ8TF01 805 aaKnown RBP12.57□□□□□ -0.4
POLR2J3-215ENST00000511313 SMARCC1Q92922 1105 aaPredicted RBP12.57□□□□□ -0.4
POLR2J3-215ENST00000511313 NOS1P29475 1434 aa12.57□□□□□ -0.4
POLR2J3-215ENST00000511313 ZC3H13Q5T200 1668 aaKnown RBP12.57□□□□□ -0.4
POLR2J3-215ENST00000511313 JCADQ9P266 1359 aa12.56□□□□□ -0.4
POLR2J3-215ENST00000511313 GTF2E1P29083 439 aaPredicted RBP12.56□□□□□ -0.4
POLR2J3-215ENST00000511313 GAS2L2Q8NHY3 880 aa12.56□□□□□ -0.4
POLR2J3-215ENST00000511313 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.55□□□□□ -0.4
POLR2J3-215ENST00000511313 SIN3AQ96ST3 1273 aa12.55□□□□□ -0.4
POLR2J3-215ENST00000511313 EXOC5O00471 708 aa12.55□□□□□ -0.4
POLR2J3-215ENST00000511313 RXRBP28702 533 aa12.55□□□□□ -0.4
POLR2J3-215ENST00000511313 STRN4Q9NRL3 753 aa12.54□□□□□ -0.4
POLR2J3-215ENST00000511313 PIK3C2GO75747 1445 aa12.53□□□□□ -0.4
POLR2J3-215ENST00000511313 TMEM94Q12767 1356 aa12.53□□□□□ -0.4
POLR2J3-215ENST00000511313 ABCC11Q96J66 1382 aa12.53□□□□□ -0.4
POLR2J3-215ENST00000511313 NSD2O96028 1365 aa12.53□□□□□ -0.4
POLR2J3-215ENST00000511313 ABCC3O15438 1527 aa12.52□□□□□ -0.4
POLR2J3-215ENST00000511313 G3V3G9 751 aa12.52□□□□□ -0.4
POLR2J3-215ENST00000511313 ADAMTS2O95450 1211 aa12.52□□□□□ -0.4
POLR2J3-215ENST00000511313 DCAF8Q5TAQ9 597 aa12.52□□□□□ -0.4
POLR2J3-215ENST00000511313 USP47Q96K76 1375 aa12.52□□□□□ -0.4
POLR2J3-215ENST00000511313 AMOTQ4VCS5 1084 aa12.52□□□□□ -0.41
POLR2J3-215ENST00000511313 TMEM132EQ6IEE7 984 aa12.52□□□□□ -0.41
POLR2J3-215ENST00000511313 DISP3Q9P2K9 1392 aa12.52□□□□□ -0.41
POLR2J3-215ENST00000511313 POLD1P28340 1107 aa12.51□□□□□ -0.41
POLR2J3-215ENST00000511313 STK31Q9BXU1 1019 aa12.51□□□□□ -0.41
POLR2J3-215ENST00000511313 DIP2CQ9Y2E4 1556 aa12.51□□□□□ -0.41
POLR2J3-215ENST00000511313 LMTK2Q8IWU2 1503 aa12.51□□□□□ -0.41
POLR2J3-215ENST00000511313 HIRIP3Q9BW71 556 aaPredicted RBP12.5□□□□□ -0.41
POLR2J3-215ENST00000511313 ZFYVE9O95405 1425 aa12.5□□□□□ -0.41
POLR2J3-215ENST00000511313 GOLGA2Q08379 1002 aa12.5□□□□□ -0.41
POLR2J3-215ENST00000511313 C8orf37Q96NL8 207 aa12.5□□□□□ -0.41
POLR2J3-215ENST00000511313 LTV1Q96GA3 475 aaPredicted RBP12.49□□□□□ -0.41
POLR2J3-215ENST00000511313 TEX13AQ9BXU3 409 aaPredicted RBP12.49□□□□□ -0.41
POLR2J3-215ENST00000511313 A0A087WZG4 1122 aa12.49□□□□□ -0.41
POLR2J3-215ENST00000511313 DIAPH1O60610 1272 aaKnown RBP12.49□□□□□ -0.41
POLR2J3-215ENST00000511313 PMFBP1Q8TBY8 1022 aa12.49□□□□□ -0.41
POLR2J3-215ENST00000511313 NKTRP30414 1462 aaKnown RBP12.49□□□□□ -0.41
POLR2J3-215ENST00000511313 FOXO3O43524 673 aa12.49□□□□□ -0.41
POLR2J3-215ENST00000511313 CCDC125Q86Z20 511 aa12.49□□□□□ -0.41
POLR2J3-215ENST00000511313 FLAD1Q8NFF5 587 aa12.49□□□□□ -0.41
POLR2J3-215ENST00000511313 RIMS1Q86UR5 1692 aaKnown RBP12.48□□□□□ -0.41
POLR2J3-215ENST00000511313 HSPA5P11021 654 aaKnown RBP12.48□□□□□ -0.41
POLR2J3-215ENST00000511313 MRS2Q9HD23 443 aa12.48□□□□□ -0.41
POLR2J3-215ENST00000511313 DDX58O95786 925 aaKnown RBP12.47□□□□□ -0.41
POLR2J3-215ENST00000511313 TTC21BQ7Z4L5 1316 aa12.47□□□□□ -0.41
POLR2J3-215ENST00000511313 KDM4FA0A1W2PPD8 638 aa12.47□□□□□ -0.41
POLR2J3-215ENST00000511313 U2AF1L5P0DN76 240 aaPredicted RBP12.47□□□□□ -0.41
POLR2J3-215ENST00000511313 U2AF1Q01081 240 aaKnown RBP eCLIP12.47□□□□□ -0.41
POLR2J3-215ENST00000511313 USP21Q9UK80 565 aa12.47□□□□□ -0.41
POLR2J3-215ENST00000511313 IQSEC2Q5JU85 1478 aa12.47□□□□□ -0.41
POLR2J3-215ENST00000511313 STK32BQ9NY57 414 aa12.46□□□□□ -0.41
POLR2J3-215ENST00000511313 SYTL4Q96C24 671 aaPredicted RBP12.46□□□□□ -0.41
POLR2J3-215ENST00000511313 FAM135BQ49AJ0 1406 aa12.46□□□□□ -0.42
POLR2J3-215ENST00000511313 ST20-MTHFSA0A0A6YYL1 179 aa12.46□□□□□ -0.42
POLR2J3-215ENST00000511313 ANKARQ7Z5J8 1434 aa12.45□□□□□ -0.42
POLR2J3-215ENST00000511313 TET3O43151 1660 aa12.45□□□□□ -0.42
POLR2J3-215ENST00000511313 YTHDC2Q9H6S0 1430 aaKnown RBP12.45□□□□□ -0.42
POLR2J3-215ENST00000511313 IPO8O15397 1037 aaKnown RBP12.45□□□□□ -0.42
POLR2J3-215ENST00000511313 RBM6P78332 1123 aaKnown RBP12.45□□□□□ -0.42
POLR2J3-215ENST00000511313 CABP2Q9NPB3 220 aa12.45□□□□□ -0.42
POLR2J3-215ENST00000511313 ZRANB1Q9UGI0 708 aa12.45□□□□□ -0.42
POLR2J3-215ENST00000511313 DIP2AQ14689 1571 aa12.45□□□□□ -0.42
POLR2J3-215ENST00000511313 ZNF652Q9Y2D9 606 aa12.44□□□□□ -0.42
POLR2J3-215ENST00000511313 ADGRB3O60242 1522 aa12.44□□□□□ -0.42
POLR2J3-215ENST00000511313 DCCP43146 1447 aa12.44□□□□□ -0.42
POLR2J3-215ENST00000511313 CABP1Q9NZU7 370 aa12.43□□□□□ -0.42
POLR2J3-215ENST00000511313 PPIP5K1Q6PFW1 1433 aa12.43□□□□□ -0.42
POLR2J3-215ENST00000511313 CEP170BQ9Y4F5 1589 aaPredicted RBP12.43□□□□□ -0.42
POLR2J3-215ENST00000511313 INO80Q9ULG1 1556 aaPredicted RBP12.42□□□□□ -0.42
POLR2J3-215ENST00000511313 ZNF335Q9H4Z2 1342 aaPredicted RBP12.42□□□□□ -0.42
POLR2J3-215ENST00000511313 DDB1Q16531 1140 aa12.42□□□□□ -0.42
POLR2J3-215ENST00000511313 THRAP3Q9Y2W1 955 aaKnown RBP12.42□□□□□ -0.42
POLR2J3-215ENST00000511313 SYNMO15061 1565 aa12.42□□□□□ -0.42
POLR2J3-215ENST00000511313 TNNT2P45379 298 aaPredicted RBP12.42□□□□□ -0.42
POLR2J3-215ENST00000511313 NEXNQ0ZGT2 675 aa12.42□□□□□ -0.42
POLR2J3-215ENST00000511313 FER1L4A9Z1Z3 1794 aa12.41□□□□□ -0.42
POLR2J3-215ENST00000511313 CAMSAP1Q5T5Y3 1602 aa12.41□□□□□ -0.42
POLR2J3-215ENST00000511313 CCDC7Q96M83 1385 aa12.41□□□□□ -0.42
POLR2J3-215ENST00000511313 CDC42BPAQ5VT25 1732 aa12.41□□□□□ -0.42
POLR2J3-215ENST00000511313 CC2D1BQ5T0F9 858 aaKnown RBP12.4□□□□□ -0.42
POLR2J3-215ENST00000511313 FAM196AQ6ZSG2 479 aa12.4□□□□□ -0.42
POLR2J3-215ENST00000511313 BCL11BQ9C0K0 894 aaPredicted RBP12.4□□□□□ -0.42
POLR2J3-215ENST00000511313 CABP4P57796 275 aa12.4□□□□□ -0.42
POLR2J3-215ENST00000511313 DDX10Q13206 875 aaKnown RBP12.4□□□□□ -0.42
POLR2J3-215ENST00000511313 DIEXFQ68CQ4 756 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms