RNA–Protein interactions for RNA: ENST00000511284.5

TRIM6-210, Transcript of tripartite motif containing 6, human

TSL 5

Gene TRIM6, Length 740 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM6-210	ENST00000511284	ATAD2	Q6PL18	1390 aa		11.91	□□□□□ -0.5
TRIM6-210	ENST00000511284	AFF2	P51816	1311 aa		11.9	□□□□□ -0.5
TRIM6-210	ENST00000511284	RBM6	P78332	1123 aa	Known RBP	11.9	□□□□□ -0.5
TRIM6-210	ENST00000511284	MST1R	Q04912	1400 aa		11.9	□□□□□ -0.5
TRIM6-210	ENST00000511284	TRIM26	Q12899	539 aa	Predicted RBP	11.9	□□□□□ -0.5
TRIM6-210	ENST00000511284	BRINP3	Q76B58	766 aa		11.9	□□□□□ -0.5
TRIM6-210	ENST00000511284	DCAF11	Q8TEB1	546 aa		11.9	□□□□□ -0.5
TRIM6-210	ENST00000511284	SHPRH	Q149N8	1683 aa		11.9	□□□□□ -0.5
TRIM6-210	ENST00000511284	YTHDC2	Q9H6S0	1430 aa	Known RBP	11.89	□□□□□ -0.51
TRIM6-210	ENST00000511284	CFAP70	Q5T0N1	1121 aa		11.89	□□□□□ -0.51
TRIM6-210	ENST00000511284	IFFO2	Q5TF58	517 aa		11.89	□□□□□ -0.51
TRIM6-210	ENST00000511284	TMEM132E	Q6IEE7	984 aa		11.89	□□□□□ -0.51
TRIM6-210	ENST00000511284	LAMC1	P11047	1609 aa		11.87	□□□□□ -0.51
TRIM6-210	ENST00000511284	QTRT2	Q9H974	415 aa	Known RBP	11.87	□□□□□ -0.51
TRIM6-210	ENST00000511284	ASXL1	Q8IXJ9	1541 aa		11.86	□□□□□ -0.51
TRIM6-210	ENST00000511284	STK26	Q9P289	416 aa		11.86	□□□□□ -0.51
TRIM6-210	ENST00000511284	C1orf167	Q5SNV9	1468 aa		11.86	□□□□□ -0.51
TRIM6-210	ENST00000511284	AHDC1	Q5TGY3	1603 aa	Predicted RBP	11.86	□□□□□ -0.51
TRIM6-210	ENST00000511284	WAPL	Q7Z5K2	1190 aa		11.85	□□□□□ -0.51
TRIM6-210	ENST00000511284	LRRC59	Q96AG4	307 aa	Known RBP	11.85	□□□□□ -0.51
TRIM6-210	ENST00000511284	KDM2A	Q9Y2K7	1162 aa		11.85	□□□□□ -0.51
TRIM6-210	ENST00000511284	LRP5	O75197	1615 aa		11.85	□□□□□ -0.51
TRIM6-210	ENST00000511284	DLC1	Q96QB1	1528 aa		11.84	□□□□□ -0.51
TRIM6-210	ENST00000511284	ADGRB1	O14514	1584 aa		11.84	□□□□□ -0.51
TRIM6-210	ENST00000511284	KNDC1	Q76NI1	1749 aa		11.83	□□□□□ -0.52
TRIM6-210	ENST00000511284	NALCN	Q8IZF0	1738 aa		11.83	□□□□□ -0.52
TRIM6-210	ENST00000511284	CCDC125	Q86Z20	511 aa		11.83	□□□□□ -0.52
TRIM6-210	ENST00000511284	NGLY1	Q96IV0	654 aa		11.83	□□□□□ -0.52
TRIM6-210	ENST00000511284	CDC42BPG	Q6DT37	1551 aa		11.83	□□□□□ -0.52
TRIM6-210	ENST00000511284	PLEKHH1	Q9ULM0	1364 aa		11.82	□□□□□ -0.52
TRIM6-210	ENST00000511284	SOS2	Q07890	1332 aa	Predicted RBP	11.82	□□□□□ -0.52
TRIM6-210	ENST00000511284	EP400	Q96L91	3159 aa		11.81	□□□□□ -0.52
TRIM6-210	ENST00000511284	PRAM1	Q96QH2	718 aa		11.81	□□□□□ -0.52
TRIM6-210	ENST00000511284	ORAI2	Q96SN7	254 aa		11.81	□□□□□ -0.52
TRIM6-210	ENST00000511284	C8orf37	Q96NL8	207 aa		11.8	□□□□□ -0.52
TRIM6-210	ENST00000511284	POGK	Q9P215	609 aa		11.8	□□□□□ -0.52
TRIM6-210	ENST00000511284	NPHP3	Q7Z494	1330 aa		11.8	□□□□□ -0.52
TRIM6-210	ENST00000511284	ESCO1	Q5FWF5	840 aa		11.79	□□□□□ -0.52
TRIM6-210	ENST00000511284	L3MBTL2	Q969R5	705 aa		11.79	□□□□□ -0.52
TRIM6-210	ENST00000511284	TRAK1	Q9UPV9	953 aa		11.79	□□□□□ -0.52
TRIM6-210	ENST00000511284	YY1	P25490	414 aa		11.78	□□□□□ -0.52
TRIM6-210	ENST00000511284	NHSL1	Q5SYE7	1610 aa		11.78	□□□□□ -0.52
TRIM6-210	ENST00000511284	SIN3A	Q96ST3	1273 aa		11.77	□□□□□ -0.53
TRIM6-210	ENST00000511284	EIF3A	Q14152	1382 aa	Known RBP	11.76	□□□□□ -0.53
TRIM6-210	ENST00000511284	ANKAR	Q7Z5J8	1434 aa		11.76	□□□□□ -0.53
TRIM6-210	ENST00000511284	KIAA1210	Q9ULL0	1709 aa		11.75	□□□□□ -0.53
TRIM6-210	ENST00000511284	WASL	O00401	505 aa	Predicted RBP	11.75	□□□□□ -0.53
TRIM6-210	ENST00000511284	FOXO3	O43524	673 aa		11.75	□□□□□ -0.53
TRIM6-210	ENST00000511284	DDX17	Q92841	729 aa	Known RBP	11.75	□□□□□ -0.53
TRIM6-210	ENST00000511284	PNPLA6	Q8IY17	1366 aa		11.75	□□□□□ -0.53
TRIM6-210	ENST00000511284	ADGRB2	O60241	1585 aa		11.75	□□□□□ -0.53
TRIM6-210	ENST00000511284	SAFB2	Q14151	953 aa	Known RBP eCLIP	11.74	□□□□□ -0.53
TRIM6-210	ENST00000511284	NBPF1	Q3BBV0	1214 aa		11.74	□□□□□ -0.53
TRIM6-210	ENST00000511284	PHF8	Q9UPP1	1060 aa		11.74	□□□□□ -0.53
TRIM6-210	ENST00000511284	NEUROD1	Q13562	356 aa		11.73	□□□□□ -0.53
TRIM6-210	ENST00000511284	FMN2	Q9NZ56	1722 aa		11.72	□□□□□ -0.53
TRIM6-210	ENST00000511284	PXDN	Q92626	1479 aa		11.72	□□□□□ -0.53
TRIM6-210	ENST00000511284	NUTM2F	A1L443	756 aa		11.72	□□□□□ -0.53
TRIM6-210	ENST00000511284	PSME1	Q06323	249 aa		11.72	□□□□□ -0.53
TRIM6-210	ENST00000511284	SPATA31A3	Q5VYP0	1347 aa		11.71	□□□□□ -0.53
TRIM6-210	ENST00000511284	MINK1	Q8N4C8	1332 aa	Predicted RBP	11.71	□□□□□ -0.53
TRIM6-210	ENST00000511284	KRT28	Q7Z3Y7	464 aa		11.71	□□□□□ -0.53
TRIM6-210	ENST00000511284	TRPC5	Q9UL62	973 aa	Predicted RBP	11.71	□□□□□ -0.53
TRIM6-210	ENST00000511284	CLSPN	Q9HAW4	1339 aa		11.7	□□□□□ -0.54
TRIM6-210	ENST00000511284	HIRIP3	Q9BW71	556 aa	Predicted RBP	11.7	□□□□□ -0.54
TRIM6-210	ENST00000511284	BLM	P54132	1417 aa	Predicted RBP	11.69	□□□□□ -0.54
TRIM6-210	ENST00000511284	SBNO1	A3KN83	1393 aa		11.69	□□□□□ -0.54
TRIM6-210	ENST00000511284	GPRASP1	Q5JY77	1395 aa		11.69	□□□□□ -0.54
TRIM6-210	ENST00000511284	KIF1A	Q12756	1690 aa		11.69	□□□□□ -0.54
TRIM6-210	ENST00000511284	CENPJ	Q9HC77	1338 aa	Predicted RBP	11.69	□□□□□ -0.54
TRIM6-210	ENST00000511284	DEFB132	Q7Z7B7	95 aa		11.69	□□□□□ -0.54
TRIM6-210	ENST00000511284	USP21	Q9UK80	565 aa		11.69	□□□□□ -0.54
TRIM6-210	ENST00000511284	CCDC61	Q9Y6R9	512 aa		11.69	□□□□□ -0.54
TRIM6-210	ENST00000511284	TULP4	Q9NRJ4	1543 aa		11.69	□□□□□ -0.54
TRIM6-210	ENST00000511284	TONSL	Q96HA7	1378 aa		11.68	□□□□□ -0.54
TRIM6-210	ENST00000511284	PRR36	Q9H6K5	1346 aa		11.68	□□□□□ -0.54
TRIM6-210	ENST00000511284	ADAMTS2	O95450	1211 aa		11.68	□□□□□ -0.54
TRIM6-210	ENST00000511284	NUDT16	Q96DE0	195 aa	Known RBP	11.68	□□□□□ -0.54
TRIM6-210	ENST00000511284	CDK19	Q9BWU1	502 aa		11.68	□□□□□ -0.54
TRIM6-210	ENST00000511284	TIMELESS	Q9UNS1	1208 aa		11.68	□□□□□ -0.54
TRIM6-210	ENST00000511284	ARHGEF28	Q8N1W1	1705 aa	Known RBP	11.67	□□□□□ -0.54
TRIM6-210	ENST00000511284	PSD	A5PKW4	1024 aa	Predicted RBP	11.67	□□□□□ -0.54
TRIM6-210	ENST00000511284	NBPF8	Q3BBV2	869 aa		11.67	□□□□□ -0.54
TRIM6-210	ENST00000511284	FNBP4	Q8N3X1	1017 aa	Predicted RBP	11.67	□□□□□ -0.54
TRIM6-210	ENST00000511284	COL22A1	Q8NFW1	1626 aa	Predicted RBP	11.67	□□□□□ -0.54
TRIM6-210	ENST00000511284	ROCK2	O75116	1388 aa	Known RBP	11.67	□□□□□ -0.54
TRIM6-210	ENST00000511284	PLEKHG3	A1L390	1219 aa		11.66	□□□□□ -0.54
TRIM6-210	ENST00000511284	XPC	Q01831	940 aa	Predicted RBP	11.66	□□□□□ -0.54
TRIM6-210	ENST00000511284	SF3B2	Q13435	895 aa	Known RBP	11.66	□□□□□ -0.54
TRIM6-210	ENST00000511284	PMFBP1	Q8TBY8	1022 aa		11.66	□□□□□ -0.54
TRIM6-210	ENST00000511284	ARHGEF10	O15013	1369 aa		11.66	□□□□□ -0.54
TRIM6-210	ENST00000511284	USP32	Q8NFA0	1604 aa		11.65	□□□□□ -0.54
TRIM6-210	ENST00000511284	SENP3-EIF4A1	A0A087X0R7	540 aa		11.65	□□□□□ -0.54
TRIM6-210	ENST00000511284	TNS3	Q68CZ2	1445 aa		11.65	□□□□□ -0.54
TRIM6-210	ENST00000511284	POLR3A	O14802	1390 aa	Predicted RBP	11.65	□□□□□ -0.55
TRIM6-210	ENST00000511284	ATP7B	P35670	1465 aa		11.64	□□□□□ -0.55
TRIM6-210	ENST00000511284	ATRN	O75882	1429 aa		11.64	□□□□□ -0.55
TRIM6-210	ENST00000511284	NGDN	Q8NEJ9	315 aa	Known RBP	11.64	□□□□□ -0.55
TRIM6-210	ENST00000511284	SBNO2	Q9Y2G9	1366 aa		11.64	□□□□□ -0.55
TRIM6-210	ENST00000511284	TRPM1	Q7Z4N2	1603 aa		11.64	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms