RNA–Protein interactions for RNA: ENST00000511255.1

SMAD1-210, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-210ENST00000511255 DOK7Q18PE1 504 aa11.77□□□□□ -0.53
SMAD1-210ENST00000511255 RRP7BPQ9NSQ0 103 aa11.77□□□□□ -0.53
SMAD1-210ENST00000511255 SHANK2Q9UPX8 1470 aa11.76□□□□□ -0.53
SMAD1-210ENST00000511255 DNMT1P26358 1616 aaKnown RBP11.76□□□□□ -0.53
SMAD1-210ENST00000511255 FOXK1P85037 733 aa11.75□□□□□ -0.53
SMAD1-210ENST00000511255 DSG2Q14126 1118 aa11.75□□□□□ -0.53
SMAD1-210ENST00000511255 VARS2Q5ST30 1063 aaKnown RBP11.75□□□□□ -0.53
SMAD1-210ENST00000511255 KIF15Q9NS87 1388 aa11.75□□□□□ -0.53
SMAD1-210ENST00000511255 CROCC2H7BZ55 1655 aa11.75□□□□□ -0.53
SMAD1-210ENST00000511255 ZMYM3Q14202 1370 aa11.74□□□□□ -0.53
SMAD1-210ENST00000511255 ANKRD30AQ9BXX3 1397 aa11.74□□□□□ -0.53
SMAD1-210ENST00000511255 C3P01024 1663 aa11.73□□□□□ -0.53
SMAD1-210ENST00000511255 PDE4AP27815 886 aa11.73□□□□□ -0.53
SMAD1-210ENST00000511255 ITGAEP38570 1179 aa11.73□□□□□ -0.53
SMAD1-210ENST00000511255 HSPA2P54652 639 aa11.73□□□□□ -0.53
SMAD1-210ENST00000511255 CLTCQ00610 1675 aaKnown RBP11.73□□□□□ -0.53
SMAD1-210ENST00000511255 LMTK3Q96Q04 1460 aa11.73□□□□□ -0.53
SMAD1-210ENST00000511255 DUOX2Q9NRD8 1548 aa11.73□□□□□ -0.53
SMAD1-210ENST00000511255 WASHC2CQ9Y4E1 1318 aa11.73□□□□□ -0.53
SMAD1-210ENST00000511255 UHRF1BP1Q6BDS2 1440 aa11.72□□□□□ -0.53
SMAD1-210ENST00000511255 PLPP6Q8IY26 295 aa11.71□□□□□ -0.53
SMAD1-210ENST00000511255 ZNF687Q8N1G0 1237 aa11.71□□□□□ -0.53
SMAD1-210ENST00000511255 MROH2AA6NES4 1674 aa11.71□□□□□ -0.54
SMAD1-210ENST00000511255 LARP6Q9BRS8 491 aaKnown RBP11.7□□□□□ -0.54
SMAD1-210ENST00000511255 KDM5DQ9BY66 1539 aa11.7□□□□□ -0.54
SMAD1-210ENST00000511255 ERBINQ96RT1 1412 aa11.69□□□□□ -0.54
SMAD1-210ENST00000511255 PREX1Q8TCU6 1659 aa11.69□□□□□ -0.54
SMAD1-210ENST00000511255 EIF2AK4Q9P2K8 1649 aaKnown RBP11.69□□□□□ -0.54
SMAD1-210ENST00000511255 NCOA1Q15788 1441 aa11.69□□□□□ -0.54
SMAD1-210ENST00000511255 PLCB2Q00722 1185 aa11.68□□□□□ -0.54
SMAD1-210ENST00000511255 MFSD10Q14728 455 aa11.68□□□□□ -0.54
SMAD1-210ENST00000511255 GPR153Q6NV75 609 aa11.68□□□□□ -0.54
SMAD1-210ENST00000511255 TSHZ2Q9NRE2 1034 aa11.68□□□□□ -0.54
SMAD1-210ENST00000511255 SETD1BQ9UPS6 1966 aaKnown RBP11.68□□□□□ -0.54
SMAD1-210ENST00000511255 NPATQ14207 1427 aa11.68□□□□□ -0.54
SMAD1-210ENST00000511255 FAM135AQ9P2D6 1515 aa11.67□□□□□ -0.54
SMAD1-210ENST00000511255 SLC34A2O95436 690 aa11.67□□□□□ -0.54
SMAD1-210ENST00000511255 ADGRL2O95490 1459 aa11.67□□□□□ -0.54
SMAD1-210ENST00000511255 PTPRKQ15262 1439 aa11.67□□□□□ -0.54
SMAD1-210ENST00000511255 RNF17Q9BXT8 1623 aaKnown RBP11.67□□□□□ -0.54
SMAD1-210ENST00000511255 KANK1Q14678 1352 aa11.67□□□□□ -0.54
SMAD1-210ENST00000511255 RIMBP2O15034 1052 aa11.66□□□□□ -0.54
SMAD1-210ENST00000511255 PPP1R15BQ5SWA1 713 aa11.66□□□□□ -0.54
SMAD1-210ENST00000511255 FBXO31Q5XUX0 539 aaPredicted RBP11.65□□□□□ -0.54
SMAD1-210ENST00000511255 ANKRD50Q9ULJ7 1429 aa11.65□□□□□ -0.54
SMAD1-210ENST00000511255 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.65□□□□□ -0.55
SMAD1-210ENST00000511255 ABCC3O15438 1527 aa11.65□□□□□ -0.55
SMAD1-210ENST00000511255 PZPP20742 1482 aa11.64□□□□□ -0.55
SMAD1-210ENST00000511255 RRBP1Q9P2E9 1410 aaKnown RBP11.64□□□□□ -0.55
SMAD1-210ENST00000511255 ARSIQ5FYB1 569 aa11.64□□□□□ -0.55
SMAD1-210ENST00000511255 DDX27Q96GQ7 796 aaKnown RBP11.64□□□□□ -0.55
SMAD1-210ENST00000511255 ZSWIM6Q9HCJ5 1215 aa11.64□□□□□ -0.55
SMAD1-210ENST00000511255 TNRQ92752 1358 aa11.64□□□□□ -0.55
SMAD1-210ENST00000511255 MROH1Q8NDA8 1641 aa11.64□□□□□ -0.55
SMAD1-210ENST00000511255 ZC3H13Q5T200 1668 aaKnown RBP11.63□□□□□ -0.55
SMAD1-210ENST00000511255 KHSRPQ92945 711 aaKnown RBP eCLIP11.63□□□□□ -0.55
SMAD1-210ENST00000511255 PRDM15P57071 1507 aaPredicted RBP11.62□□□□□ -0.55
SMAD1-210ENST00000511255 CEP152O94986 1710 aa11.62□□□□□ -0.55
SMAD1-210ENST00000511255 ROCK1Q13464 1354 aa11.62□□□□□ -0.55
SMAD1-210ENST00000511255 MYO3AQ8NEV4 1616 aa11.61□□□□□ -0.55
SMAD1-210ENST00000511255 PTCD2Q8WV60 388 aaKnown RBP11.61□□□□□ -0.55
SMAD1-210ENST00000511255 PCDHGA4Q9Y5G9 962 aa11.61□□□□□ -0.55
SMAD1-210ENST00000511255 CAMSAP1Q5T5Y3 1602 aa11.6□□□□□ -0.55
SMAD1-210ENST00000511255 CEP170BQ9Y4F5 1589 aaPredicted RBP11.59□□□□□ -0.55
SMAD1-210ENST00000511255 PTGER2P43116 358 aa11.59□□□□□ -0.55
SMAD1-210ENST00000511255 DEPDC5O75140 1603 aa11.59□□□□□ -0.55
SMAD1-210ENST00000511255 A2ML1A8K2U0 1454 aa11.58□□□□□ -0.56
SMAD1-210ENST00000511255 ERVK-7P63135 1459 aa11.58□□□□□ -0.56
SMAD1-210ENST00000511255 CFAP65Q6ZU64 1925 aaKnown RBP11.57□□□□□ -0.56
SMAD1-210ENST00000511255 ZNF142P52746 1687 aaPredicted RBP11.57□□□□□ -0.56
SMAD1-210ENST00000511255 OXER1Q8TDS5 423 aa11.57□□□□□ -0.56
SMAD1-210ENST00000511255 ARHGAP31Q2M1Z3 1444 aa11.56□□□□□ -0.56
SMAD1-210ENST00000511255 SPATA31D1Q6ZQQ2 1576 aa11.56□□□□□ -0.56
SMAD1-210ENST00000511255 EMILIN3Q9NT22 766 aa11.56□□□□□ -0.56
SMAD1-210ENST00000511255 NLRP1Q9C000 1473 aa11.56□□□□□ -0.56
SMAD1-210ENST00000511255 LMTK2Q8IWU2 1503 aa11.55□□□□□ -0.56
SMAD1-210ENST00000511255 VWDEQ8N2E2 1590 aa11.55□□□□□ -0.56
SMAD1-210ENST00000511255 NUP155O75694 1391 aa11.54□□□□□ -0.56
SMAD1-210ENST00000511255 UGGT1Q9NYU2 1555 aa11.54□□□□□ -0.56
SMAD1-210ENST00000511255 NUDT7P0C024 238 aa11.54□□□□□ -0.56
SMAD1-210ENST00000511255 CAMK2BQ13554 666 aa11.54□□□□□ -0.56
SMAD1-210ENST00000511255 ANKRD13DQ6ZTN6 518 aa11.54□□□□□ -0.56
SMAD1-210ENST00000511255 THEMISQ8N1K5 641 aaPredicted RBP11.54□□□□□ -0.56
SMAD1-210ENST00000511255 STRCQ7RTU9 1775 aa11.54□□□□□ -0.56
SMAD1-210ENST00000511255 UNC13BO14795 1591 aa11.54□□□□□ -0.56
SMAD1-210ENST00000511255 PLA2R1Q13018 1463 aa11.53□□□□□ -0.56
SMAD1-210ENST00000511255 UPF1Q92900 1129 aaKnown RBP eCLIP11.53□□□□□ -0.56
SMAD1-210ENST00000511255 EFCAB6Q5THR3 1501 aa11.53□□□□□ -0.56
SMAD1-210ENST00000511255 ANKLE2Q86XL3 938 aa11.52□□□□□ -0.57
SMAD1-210ENST00000511255 TRIM52Q96A61 297 aa11.52□□□□□ -0.57
SMAD1-210ENST00000511255 PTPRTO14522 1441 aa11.52□□□□□ -0.57
SMAD1-210ENST00000511255 NAIPQ13075 1403 aa11.52□□□□□ -0.57
SMAD1-210ENST00000511255 TET3O43151 1660 aa11.5□□□□□ -0.57
SMAD1-210ENST00000511255 HFM1A2PYH4 1435 aa11.5□□□□□ -0.57
SMAD1-210ENST00000511255 GCC2Q8IWJ2 1684 aa11.49□□□□□ -0.57
SMAD1-210ENST00000511255 IDI1Q13907 227 aa11.49□□□□□ -0.57
SMAD1-210ENST00000511255 NOS1P29475 1434 aa11.49□□□□□ -0.57
SMAD1-210ENST00000511255 RPRD2Q5VT52 1461 aaKnown RBP11.49□□□□□ -0.57
SMAD1-210ENST00000511255 IQGAP3Q86VI3 1631 aa11.49□□□□□ -0.57
SMAD1-210ENST00000511255 TBC1D12O60347 775 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms