RNA–Protein interactions for RNA: ENST00000511116.5

SMAD5-207, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-207ENST00000511116 FOXD1Q16676 465 aa34.31■■■■□ 3.08
SMAD5-207ENST00000511116 QTRT2Q9H974 415 aaKnown RBP34.31■■■■□ 3.08
SMAD5-207ENST00000511116 ADGRF5Q8IZF2 1346 aa34.3■■■■□ 3.08
SMAD5-207ENST00000511116 ANKRD30BQ9BXX2 1392 aa34.28■■■■□ 3.08
SMAD5-207ENST00000511116 ADAMTS2O95450 1211 aa34.25■■■■□ 3.07
SMAD5-207ENST00000511116 NGLY1Q96IV0 654 aa34.25■■■■□ 3.07
SMAD5-207ENST00000511116 LRPPRCP42704 1394 aaKnown RBP34.24■■■■□ 3.07
SMAD5-207ENST00000511116 MYOM2P54296 1465 aa34.24■■■■□ 3.07
SMAD5-207ENST00000511116 PXDNQ92626 1479 aa34.24■■■■□ 3.07
SMAD5-207ENST00000511116 KNDC1Q76NI1 1749 aa34.24■■■■□ 3.07
SMAD5-207ENST00000511116 ABCC11Q96J66 1382 aa34.23■■■■□ 3.07
SMAD5-207ENST00000511116 NPHP3Q7Z494 1330 aa34.23■■■■□ 3.07
SMAD5-207ENST00000511116 PIK3C2GO75747 1445 aa34.22■■■■□ 3.07
SMAD5-207ENST00000511116 FNBP4Q8N3X1 1017 aaPredicted RBP34.22■■■■□ 3.07
SMAD5-207ENST00000511116 MPHOSPH9Q99550 1183 aa34.22■■■■□ 3.07
SMAD5-207ENST00000511116 ESCO1Q5FWF5 840 aa34.18■■■■□ 3.06
SMAD5-207ENST00000511116 RGL3Q3MIN7 710 aa34.17■■■■□ 3.06
SMAD5-207ENST00000511116 USP21Q9UK80 565 aa34.16■■■■□ 3.06
SMAD5-207ENST00000511116 ATRNO75882 1429 aa34.15■■■■□ 3.06
SMAD5-207ENST00000511116 WAPLQ7Z5K2 1190 aa34.15■■■■□ 3.06
SMAD5-207ENST00000511116 PLEKHH1Q9ULM0 1364 aa34.13■■■■□ 3.05
SMAD5-207ENST00000511116 TRPC5Q9UL62 973 aaPredicted RBP34.13■■■■□ 3.05
SMAD5-207ENST00000511116 FMN2Q9NZ56 1722 aa34.13■■■■□ 3.05
SMAD5-207ENST00000511116 STK26Q9P289 416 aa34.12■■■■□ 3.05
SMAD5-207ENST00000511116 MARF1Q9Y4F3 1742 aaKnown RBP34.12■■■■□ 3.05
SMAD5-207ENST00000511116 YTHDC2Q9H6S0 1430 aaKnown RBP34.12■■■■□ 3.05
SMAD5-207ENST00000511116 NRXN1Q9ULB1 1477 aa34.11■■■■□ 3.05
SMAD5-207ENST00000511116 FOXO3O43524 673 aa34.1■■■■□ 3.05
SMAD5-207ENST00000511116 TMEM132EQ6IEE7 984 aa34.1■■■■□ 3.05
SMAD5-207ENST00000511116 SIRT1Q96EB6 747 aa34.1■■■■□ 3.05
SMAD5-207ENST00000511116 ACIN1Q9UKV3 1341 aaKnown RBP34.09■■■■□ 3.05
SMAD5-207ENST00000511116 BCL9LQ86UU0 1499 aa34.08■■■■□ 3.05
SMAD5-207ENST00000511116 KIF1AQ12756 1690 aa34.06■■■■□ 3.04
SMAD5-207ENST00000511116 C14orf93Q9H972 538 aaKnown RBP34.05■■■■□ 3.04
SMAD5-207ENST00000511116 ATAD2Q6PL18 1390 aa34.05■■■■□ 3.04
SMAD5-207ENST00000511116 XPCQ01831 940 aaPredicted RBP34.04■■■■□ 3.04
SMAD5-207ENST00000511116 EP400Q96L91 3159 aa34.01■■■■□ 3.04
SMAD5-207ENST00000511116 NUTM2FA1L443 756 aa34.01■■■■□ 3.03
SMAD5-207ENST00000511116 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.01■■■■□ 3.03
SMAD5-207ENST00000511116 SPATA31A3Q5VYP0 1347 aa34.01■■■■□ 3.03
SMAD5-207ENST00000511116 SLIT2O94813 1529 aa33.95■■■■□ 3.03
SMAD5-207ENST00000511116 DHX57Q6P158 1386 aaKnown RBP33.94■■■■□ 3.02
SMAD5-207ENST00000511116 CFAP70Q5T0N1 1121 aa33.93■■■■□ 3.02
SMAD5-207ENST00000511116 RGPD8O14715 1765 aaPredicted RBP33.93■■■■□ 3.02
SMAD5-207ENST00000511116 GJD4Q96KN9 370 aaPredicted RBP33.92■■■■□ 3.02
SMAD5-207ENST00000511116 DLC1Q96QB1 1528 aa33.92■■■■□ 3.02
SMAD5-207ENST00000511116 USP32Q8NFA0 1604 aa33.92■■■■□ 3.02
SMAD5-207ENST00000511116 SRCAPQ6ZRS2 3230 aa33.91■■■■□ 3.02
SMAD5-207ENST00000511116 KRT28Q7Z3Y7 464 aa33.9■■■■□ 3.02
SMAD5-207ENST00000511116 TNS3Q68CZ2 1445 aa33.89■■■■□ 3.02
SMAD5-207ENST00000511116 PHF8Q9UPP1 1060 aa33.88■■■■□ 3.01
SMAD5-207ENST00000511116 GLI3P10071 1580 aa33.87■■■■□ 3.01
SMAD5-207ENST00000511116 UNC5CLQ8IV45 518 aa33.87■■■■□ 3.01
SMAD5-207ENST00000511116 ADGRB1O14514 1584 aa33.86■■■■□ 3.01
SMAD5-207ENST00000511116 ADGRB2O60241 1585 aa33.86■■■■□ 3.01
SMAD5-207ENST00000511116 SBNO1A3KN83 1393 aa33.85■■■■□ 3.01
SMAD5-207ENST00000511116 RALGAPBQ86X10 1494 aa33.85■■■■□ 3.01
SMAD5-207ENST00000511116 PRAM1Q96QH2 718 aa33.84■■■■□ 3.01
SMAD5-207ENST00000511116 ANKARQ7Z5J8 1434 aa33.84■■■■□ 3.01
SMAD5-207ENST00000511116 RAB3GAP2Q9H2M9 1393 aa33.84■■■■□ 3.01
SMAD5-207ENST00000511116 CCDC125Q86Z20 511 aa33.83■■■■□ 3.01
SMAD5-207ENST00000511116 PSME1Q06323 249 aa33.81■■■■□ 3
SMAD5-207ENST00000511116 ABCA3Q99758 1704 aa33.81■■■■□ 3
SMAD5-207ENST00000511116 NWD2Q9ULI1 1742 aa33.78■■■■□ 3
SMAD5-207ENST00000511116 ARHGEF10O15013 1369 aa33.77■■■■□ 3
SMAD5-207ENST00000511116 PLCH1Q4KWH8 1693 aa33.75■■■□□ 2.99
SMAD5-207ENST00000511116 SAFB2Q14151 953 aaKnown RBP eCLIP33.75■■■□□ 2.99
SMAD5-207ENST00000511116 VPS72Q15906 364 aa33.73■■■□□ 2.99
SMAD5-207ENST00000511116 TRPM3Q9HCF6 1732 aaPredicted RBP33.73■■■□□ 2.99
SMAD5-207ENST00000511116 CABLES1Q8TDN4 633 aa33.72■■■□□ 2.99
SMAD5-207ENST00000511116 POGKQ9P215 609 aa33.72■■■□□ 2.99
SMAD5-207ENST00000511116 BRWD3Q6RI45 1802 aa33.71■■■□□ 2.99
SMAD5-207ENST00000511116 ONECUT3O60422 494 aaPredicted RBP33.69■■■□□ 2.98
SMAD5-207ENST00000511116 BLMP54132 1417 aaPredicted RBP33.69■■■□□ 2.98
SMAD5-207ENST00000511116 STAC3Q96MF2 364 aa33.68■■■□□ 2.98
SMAD5-207ENST00000511116 HAP1P54257 671 aaPredicted RBP33.67■■■□□ 2.98
SMAD5-207ENST00000511116 PMFBP1Q8TBY8 1022 aa33.67■■■□□ 2.98
SMAD5-207ENST00000511116 ZRANB1Q9UGI0 708 aa33.67■■■□□ 2.98
SMAD5-207ENST00000511116 EIF3AQ14152 1382 aaKnown RBP33.67■■■□□ 2.98
SMAD5-207ENST00000511116 TULP4Q9NRJ4 1543 aa33.67■■■□□ 2.98
SMAD5-207ENST00000511116 ALS2Q96Q42 1657 aa33.67■■■□□ 2.98
SMAD5-207ENST00000511116 PRR36Q9H6K5 1346 aa33.65■■■□□ 2.98
SMAD5-207ENST00000511116 TRAK1Q9UPV9 953 aa33.65■■■□□ 2.98
SMAD5-207ENST00000511116 NRAPQ86VF7 1730 aa33.63■■■□□ 2.97
SMAD5-207ENST00000511116 SEPT12Q8IYM1 358 aa33.63■■■□□ 2.97
SMAD5-207ENST00000511116 FAM83GA6ND36 823 aa33.62■■■□□ 2.97
SMAD5-207ENST00000511116 HRCP23327 699 aa33.62■■■□□ 2.97
SMAD5-207ENST00000511116 LMOD2Q6P5Q4 547 aa33.61■■■□□ 2.97
SMAD5-207ENST00000511116 WASLO00401 505 aaPredicted RBP33.6■■■□□ 2.97
SMAD5-207ENST00000511116 DCAF11Q8TEB1 546 aa33.6■■■□□ 2.97
SMAD5-207ENST00000511116 HIRIP3Q9BW71 556 aaPredicted RBP33.6■■■□□ 2.97
SMAD5-207ENST00000511116 MINK1Q8N4C8 1332 aaPredicted RBP33.59■■■□□ 2.97
SMAD5-207ENST00000511116 CRYBG1Q9Y4K1 1723 aa33.58■■■□□ 2.97
SMAD5-207ENST00000511116 GPRASP1Q5JY77 1395 aa33.58■■■□□ 2.97
SMAD5-207ENST00000511116 KDM2AQ9Y2K7 1162 aa33.56■■■□□ 2.96
SMAD5-207ENST00000511116 COL14A1Q05707 1796 aaKnown RBP33.56■■■□□ 2.96
SMAD5-207ENST00000511116 ARHGEF28Q8N1W1 1705 aaKnown RBP33.56■■■□□ 2.96
SMAD5-207ENST00000511116 PLEKHG5O94827 1062 aa33.53■■■□□ 2.96
SMAD5-207ENST00000511116 ATP7BP35670 1465 aa33.52■■■□□ 2.96
SMAD5-207ENST00000511116 KRT27Q7Z3Y8 459 aa33.52■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms