RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 TRAK2O60296 914 aa12.79□□□□□ -0.36
NEK1-206ENST00000510533 TCEAL9Q9UHQ7 104 aa12.79□□□□□ -0.36
NEK1-206ENST00000510533 NAT10Q9H0A0 1025 aaKnown RBP12.79□□□□□ -0.36
NEK1-206ENST00000510533 ACBD3Q9H3P7 528 aa12.79□□□□□ -0.36
NEK1-206ENST00000510533 ADAMTS8Q9UP79 889 aa12.78□□□□□ -0.36
NEK1-206ENST00000510533 VPS37DQ86XT2 251 aa12.78□□□□□ -0.36
NEK1-206ENST00000510533 RALYLQ86SE5 291 aaKnown RBP12.78□□□□□ -0.36
NEK1-206ENST00000510533 TRIM34Q9BYJ4 488 aa12.78□□□□□ -0.36
NEK1-206ENST00000510533 RUFY1Q96T51 708 aa12.77□□□□□ -0.36
NEK1-206ENST00000510533 NINLQ9Y2I6 1382 aa12.77□□□□□ -0.36
NEK1-206ENST00000510533 UBTFL1P0CB47 393 aaPredicted RBP12.77□□□□□ -0.36
NEK1-206ENST00000510533 WWC1Q8IX03 1113 aa12.77□□□□□ -0.36
NEK1-206ENST00000510533 RNF214Q8ND24 703 aa12.77□□□□□ -0.36
NEK1-206ENST00000510533 PSMA5P28066 241 aa12.77□□□□□ -0.37
NEK1-206ENST00000510533 AK7Q96M32 723 aa12.77□□□□□ -0.37
NEK1-206ENST00000510533 MTERF4Q7Z6M4 381 aaKnown RBP12.77□□□□□ -0.37
NEK1-206ENST00000510533 WASHC2AQ641Q2 1341 aa12.77□□□□□ -0.37
NEK1-206ENST00000510533 LETM1O95202 739 aaPredicted RBP12.76□□□□□ -0.37
NEK1-206ENST00000510533 MBD3O95983 291 aa12.76□□□□□ -0.37
NEK1-206ENST00000510533 OLFM4Q6UX06 510 aa12.76□□□□□ -0.37
NEK1-206ENST00000510533 GGNBP2Q9H3C7 697 aa12.76□□□□□ -0.37
NEK1-206ENST00000510533 CUX1P39880 1505 aa12.76□□□□□ -0.37
NEK1-206ENST00000510533 CDR1P51861 262 aa12.76□□□□□ -0.37
NEK1-206ENST00000510533 HSP90B2PQ58FF3 399 aa12.76□□□□□ -0.37
NEK1-206ENST00000510533 MAP7D2Q96T17 732 aa12.76□□□□□ -0.37
NEK1-206ENST00000510533 CNTROBQ8N137 903 aa12.75□□□□□ -0.37
NEK1-206ENST00000510533 CAVIN1Q6NZI2 390 aaKnown RBP12.75□□□□□ -0.37
NEK1-206ENST00000510533 NEUROD6Q96NK8 337 aa12.75□□□□□ -0.37
NEK1-206ENST00000510533 SDF4Q9BRK5 362 aa12.75□□□□□ -0.37
NEK1-206ENST00000510533 PSME1Q06323 249 aa12.75□□□□□ -0.37
NEK1-206ENST00000510533 ATAD2BQ9ULI0 1458 aa12.75□□□□□ -0.37
NEK1-206ENST00000510533 RIC3Q7Z5B4 369 aa12.75□□□□□ -0.37
NEK1-206ENST00000510533 CDCA7LQ96GN5 454 aa12.75□□□□□ -0.37
NEK1-206ENST00000510533 NAP1L1P55209 391 aaKnown RBP12.75□□□□□ -0.37
NEK1-206ENST00000510533 WASHC4Q2M389 1173 aa12.74□□□□□ -0.37
NEK1-206ENST00000510533 CTDP1Q9Y5B0 961 aaPredicted RBP12.74□□□□□ -0.37
NEK1-206ENST00000510533 TCP11L2Q8N4U5 519 aa12.74□□□□□ -0.37
NEK1-206ENST00000510533 PDZRN3Q9UPQ7 1066 aa12.74□□□□□ -0.37
NEK1-206ENST00000510533 MCM2P49736 904 aa12.74□□□□□ -0.37
NEK1-206ENST00000510533 GNAI3P08754 354 aa12.73□□□□□ -0.37
NEK1-206ENST00000510533 MTHFSP49914 203 aa12.73□□□□□ -0.37
NEK1-206ENST00000510533 RABEP1Q15276 862 aa12.73□□□□□ -0.37
NEK1-206ENST00000510533 NOM1Q5C9Z4 860 aaKnown RBP12.73□□□□□ -0.37
NEK1-206ENST00000510533 TRIM5Q9C035 493 aa12.73□□□□□ -0.37
NEK1-206ENST00000510533 TSPY26PQ9H489 355 aa12.73□□□□□ -0.37
NEK1-206ENST00000510533 PDILTQ8N807 584 aa12.73□□□□□ -0.37
NEK1-206ENST00000510533 FSD1Q9BTV5 496 aa12.73□□□□□ -0.37
NEK1-206ENST00000510533 FANCD2Q9BXW9 1451 aa12.73□□□□□ -0.37
NEK1-206ENST00000510533 NEK4P51957 841 aa12.72□□□□□ -0.37
NEK1-206ENST00000510533 CLASRPQ8N2M8 674 aaKnown RBP12.72□□□□□ -0.37
NEK1-206ENST00000510533 ZNF644Q9H582 1327 aaPredicted RBP12.72□□□□□ -0.37
NEK1-206ENST00000510533 AIMP1Q12904 312 aaKnown RBP12.72□□□□□ -0.37
NEK1-206ENST00000510533 BRMS1Q9HCU9 246 aa12.72□□□□□ -0.37
NEK1-206ENST00000510533 CCDC27Q2M243 656 aa12.72□□□□□ -0.37
NEK1-206ENST00000510533 CABP2Q9NPB3 220 aa12.72□□□□□ -0.37
NEK1-206ENST00000510533 PRPF40AO75400 957 aaKnown RBP12.72□□□□□ -0.37
NEK1-206ENST00000510533 RAPGEF4Q8WZA2 1011 aa12.72□□□□□ -0.37
NEK1-206ENST00000510533 ANKRD50Q9ULJ7 1429 aa12.72□□□□□ -0.37
NEK1-206ENST00000510533 PPP2R1AP30153 589 aa12.71□□□□□ -0.37
NEK1-206ENST00000510533 CCDC173Q0VFZ6 552 aa12.71□□□□□ -0.37
NEK1-206ENST00000510533 PDE3AQ14432 1141 aa12.71□□□□□ -0.37
NEK1-206ENST00000510533 XBP1P17861 261 aa12.71□□□□□ -0.37
NEK1-206ENST00000510533 SYTL4Q96C24 671 aaPredicted RBP12.71□□□□□ -0.37
NEK1-206ENST00000510533 GCC1Q96CN9 775 aa12.71□□□□□ -0.37
NEK1-206ENST00000510533 SURF6O75683 361 aaKnown RBP12.71□□□□□ -0.38
NEK1-206ENST00000510533 PDCP20941 246 aa12.71□□□□□ -0.38
NEK1-206ENST00000510533 CCDC43Q96MW1 224 aaKnown RBP12.7□□□□□ -0.38
NEK1-206ENST00000510533 KINO60870 393 aaKnown RBP12.7□□□□□ -0.38
NEK1-206ENST00000510533 BCL11BQ9C0K0 894 aaPredicted RBP12.7□□□□□ -0.38
NEK1-206ENST00000510533 EXOSC9Q06265 439 aaKnown RBP12.7□□□□□ -0.38
NEK1-206ENST00000510533 BRPF3Q9ULD4 1205 aa12.7□□□□□ -0.38
NEK1-206ENST00000510533 LRRC9Q6ZRR7 1453 aa12.7□□□□□ -0.38
NEK1-206ENST00000510533 CCDC30Q5VVM6 783 aa12.7□□□□□ -0.38
NEK1-206ENST00000510533 ERCC4Q92889 916 aaPredicted RBP12.7□□□□□ -0.38
NEK1-206ENST00000510533 IGF1RP08069 1367 aa12.69□□□□□ -0.38
NEK1-206ENST00000510533 SMARCA4P51532 1647 aa12.69□□□□□ -0.38
NEK1-206ENST00000510533 MSH5O43196 834 aa12.69□□□□□ -0.38
NEK1-206ENST00000510533 CAGE1Q8TC20 777 aa12.69□□□□□ -0.38
NEK1-206ENST00000510533 HIP1O00291 1037 aa12.69□□□□□ -0.38
NEK1-206ENST00000510533 CT47A1Q5JQC4 288 aaPredicted RBP12.69□□□□□ -0.38
NEK1-206ENST00000510533 OFD1O75665 1012 aa12.68□□□□□ -0.38
NEK1-206ENST00000510533 SMC2O95347 1197 aa12.68□□□□□ -0.38
NEK1-206ENST00000510533 HMGN5P82970 282 aaKnown RBP12.68□□□□□ -0.38
NEK1-206ENST00000510533 RRP12Q5JTH9 1297 aaKnown RBP12.68□□□□□ -0.38
NEK1-206ENST00000510533 CCP110O43303 1012 aa12.68□□□□□ -0.38
NEK1-206ENST00000510533 KIF21BO75037 1637 aa12.68□□□□□ -0.38
NEK1-206ENST00000510533 TMEM132EQ6IEE7 984 aa12.67□□□□□ -0.38
NEK1-206ENST00000510533 FIBPO43427 364 aa12.67□□□□□ -0.38
NEK1-206ENST00000510533 CWC15Q9P013 229 aaKnown RBP12.67□□□□□ -0.38
NEK1-206ENST00000510533 EPS15P42566 896 aa12.67□□□□□ -0.38
NEK1-206ENST00000510533 TWISTNBQ3B726 338 aaPredicted RBP12.67□□□□□ -0.38
NEK1-206ENST00000510533 GAS2L2Q8NHY3 880 aa12.67□□□□□ -0.38
NEK1-206ENST00000510533 BACH2Q9BYV9 841 aa12.67□□□□□ -0.38
NEK1-206ENST00000510533 CWC22Q9HCG8 908 aaKnown RBP12.67□□□□□ -0.38
NEK1-206ENST00000510533 PRKAR2BP31323 418 aa12.67□□□□□ -0.38
NEK1-206ENST00000510533 SART3Q15020 963 aaKnown RBP12.67□□□□□ -0.38
NEK1-206ENST00000510533 ZNF396Q96N95 335 aaPredicted RBP12.66□□□□□ -0.38
NEK1-206ENST00000510533 C1orf115Q9H7X2 142 aa12.66□□□□□ -0.38
NEK1-206ENST00000510533 FYCO1Q9BQS8 1478 aa12.66□□□□□ -0.38
NEK1-206ENST00000510533 FYB1O15117 783 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms