RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 DLC1Q96QB1 1528 aa16.97■□□□□ 0.31
HMGXB3-203ENST00000510472 TRAK1Q9UPV9 953 aa16.97■□□□□ 0.31
HMGXB3-203ENST00000510472 ROBO1Q9Y6N7 1651 aa16.97■□□□□ 0.31
HMGXB3-203ENST00000510472 KNDC1Q76NI1 1749 aa16.96■□□□□ 0.3
HMGXB3-203ENST00000510472 NALCNQ8IZF0 1738 aa16.96■□□□□ 0.3
HMGXB3-203ENST00000510472 ORAI2Q96SN7 254 aa16.95■□□□□ 0.3
HMGXB3-203ENST00000510472 POGKQ9P215 609 aa16.93■□□□□ 0.3
HMGXB3-203ENST00000510472 SAFB2Q14151 953 aaKnown RBP eCLIP16.92■□□□□ 0.3
HMGXB3-203ENST00000510472 NBPF8Q3BBV2 869 aa16.92■□□□□ 0.3
HMGXB3-203ENST00000510472 CDC42BPGQ6DT37 1551 aa16.92■□□□□ 0.3
HMGXB3-203ENST00000510472 AHDC1Q5TGY3 1603 aaPredicted RBP16.91■□□□□ 0.3
HMGXB3-203ENST00000510472 DDX17Q92841 729 aaKnown RBP16.9■□□□□ 0.3
HMGXB3-203ENST00000510472 KIAA1210Q9ULL0 1709 aa16.88■□□□□ 0.29
HMGXB3-203ENST00000510472 ESCO1Q5FWF5 840 aa16.88■□□□□ 0.29
HMGXB3-203ENST00000510472 SOS2Q07890 1332 aaPredicted RBP16.88■□□□□ 0.29
HMGXB3-203ENST00000510472 CLSPNQ9HAW4 1339 aa16.88■□□□□ 0.29
HMGXB3-203ENST00000510472 JCADQ9P266 1359 aa16.88■□□□□ 0.29
HMGXB3-203ENST00000510472 NUTM2FA1L443 756 aa16.87■□□□□ 0.29
HMGXB3-203ENST00000510472 COL16A1Q07092 1604 aaPredicted RBP16.87■□□□□ 0.29
HMGXB3-203ENST00000510472 WASLO00401 505 aaPredicted RBP16.86■□□□□ 0.29
HMGXB3-203ENST00000510472 HIRIP3Q9BW71 556 aaPredicted RBP16.86■□□□□ 0.29
HMGXB3-203ENST00000510472 MINK1Q8N4C8 1332 aaPredicted RBP16.86■□□□□ 0.29
HMGXB3-203ENST00000510472 TONSLQ96HA7 1378 aa16.86■□□□□ 0.29
HMGXB3-203ENST00000510472 LRRC59Q96AG4 307 aaKnown RBP16.85■□□□□ 0.29
HMGXB3-203ENST00000510472 GPRASP1Q5JY77 1395 aa16.85■□□□□ 0.29
HMGXB3-203ENST00000510472 FOXO3O43524 673 aa16.84■□□□□ 0.29
HMGXB3-203ENST00000510472 ADGRB2O60241 1585 aa16.83■□□□□ 0.28
HMGXB3-203ENST00000510472 PHLPP1O60346 1717 aa16.83■□□□□ 0.28
HMGXB3-203ENST00000510472 PRR36Q9H6K5 1346 aa16.83■□□□□ 0.28
HMGXB3-203ENST00000510472 ANKARQ7Z5J8 1434 aa16.82■□□□□ 0.28
HMGXB3-203ENST00000510472 SPATA31A6Q5VVP1 1343 aa16.82■□□□□ 0.28
HMGXB3-203ENST00000510472 NPHP3Q7Z494 1330 aa16.82■□□□□ 0.28
HMGXB3-203ENST00000510472 TIMELESSQ9UNS1 1208 aa16.82■□□□□ 0.28
HMGXB3-203ENST00000510472 NHSL1Q5SYE7 1610 aa16.81■□□□□ 0.28
HMGXB3-203ENST00000510472 MED1Q15648 1581 aaPredicted RBP16.81■□□□□ 0.28
HMGXB3-203ENST00000510472 ROCK2O75116 1388 aaKnown RBP16.81■□□□□ 0.28
HMGXB3-203ENST00000510472 PHF8Q9UPP1 1060 aa16.81■□□□□ 0.28
HMGXB3-203ENST00000510472 CENPJQ9HC77 1338 aaPredicted RBP16.8■□□□□ 0.28
HMGXB3-203ENST00000510472 FMN2Q9NZ56 1722 aa16.8■□□□□ 0.28
HMGXB3-203ENST00000510472 CDK19Q9BWU1 502 aa16.8■□□□□ 0.28
HMGXB3-203ENST00000510472 ARHGEF28Q8N1W1 1705 aaKnown RBP16.79■□□□□ 0.28
HMGXB3-203ENST00000510472 TRPM1Q7Z4N2 1603 aa16.79■□□□□ 0.28
HMGXB3-203ENST00000510472 RGS17Q9UGC6 210 aaPredicted RBP16.79■□□□□ 0.28
HMGXB3-203ENST00000510472 PXDNQ92626 1479 aa16.79■□□□□ 0.28
HMGXB3-203ENST00000510472 EIF3AQ14152 1382 aaKnown RBP16.78■□□□□ 0.28
HMGXB3-203ENST00000510472 PNPLA6Q8IY17 1366 aa16.78■□□□□ 0.28
HMGXB3-203ENST00000510472 XPCQ01831 940 aaPredicted RBP16.77■□□□□ 0.28
HMGXB3-203ENST00000510472 KRT28Q7Z3Y7 464 aa16.77■□□□□ 0.28
HMGXB3-203ENST00000510472 NUDT16Q96DE0 195 aaKnown RBP16.77■□□□□ 0.28
HMGXB3-203ENST00000510472 TULP4Q9NRJ4 1543 aa16.76■□□□□ 0.27
HMGXB3-203ENST00000510472 RALGAPBQ86X10 1494 aa16.76■□□□□ 0.27
HMGXB3-203ENST00000510472 CARD11Q9BXL7 1154 aa16.76■□□□□ 0.27
HMGXB3-203ENST00000510472 USP32Q8NFA0 1604 aa16.75■□□□□ 0.27
HMGXB3-203ENST00000510472 PMFBP1Q8TBY8 1022 aa16.75■□□□□ 0.27
HMGXB3-203ENST00000510472 LRP6O75581 1613 aa16.74■□□□□ 0.27
HMGXB3-203ENST00000510472 SPATA31A3Q5VYP0 1347 aa16.74■□□□□ 0.27
HMGXB3-203ENST00000510472 PHF23Q9BUL5 403 aaPredicted RBP16.74■□□□□ 0.27
HMGXB3-203ENST00000510472 CCDC61Q9Y6R9 512 aa16.74■□□□□ 0.27
HMGXB3-203ENST00000510472 PLEKHG3A1L390 1219 aa16.73■□□□□ 0.27
HMGXB3-203ENST00000510472 CCER1Q8TC90 406 aaPredicted RBP16.73■□□□□ 0.27
HMGXB3-203ENST00000510472 ATP7BP35670 1465 aa16.73■□□□□ 0.27
HMGXB3-203ENST00000510472 SHPRHQ149N8 1683 aa16.72■□□□□ 0.27
HMGXB3-203ENST00000510472 PSME1Q06323 249 aa16.72■□□□□ 0.27
HMGXB3-203ENST00000510472 SBNO1A3KN83 1393 aa16.72■□□□□ 0.27
HMGXB3-203ENST00000510472 NUTM2BA6NNL0 878 aaPredicted RBP16.71■□□□□ 0.27
HMGXB3-203ENST00000510472 NUTM2EB1AL46 878 aaPredicted RBP16.71■□□□□ 0.27
HMGXB3-203ENST00000510472 NUTM2AQ8IVF1 878 aaPredicted RBP16.71■□□□□ 0.27
HMGXB3-203ENST00000510472 KIF1AQ12756 1690 aa16.7■□□□□ 0.26
HMGXB3-203ENST00000510472 SBNO2Q9Y2G9 1366 aa16.7■□□□□ 0.26
HMGXB3-203ENST00000510472 CABP2Q9NPB3 220 aa16.7■□□□□ 0.26
HMGXB3-203ENST00000510472 POLR3AO14802 1390 aaPredicted RBP16.69■□□□□ 0.26
HMGXB3-203ENST00000510472 SRPK2P78362 688 aaKnown RBP16.69■□□□□ 0.26
HMGXB3-203ENST00000510472 EVC2Q86UK5 1308 aa16.69■□□□□ 0.26
HMGXB3-203ENST00000510472 POTEAQ6S8J7 498 aa16.68■□□□□ 0.26
HMGXB3-203ENST00000510472 NGDNQ8NEJ9 315 aaKnown RBP16.68■□□□□ 0.26
HMGXB3-203ENST00000510472 RGPD8O14715 1765 aaPredicted RBP16.68■□□□□ 0.26
HMGXB3-203ENST00000510472 TESK2Q96S53 571 aa16.67■□□□□ 0.26
HMGXB3-203ENST00000510472 ACEP12821 1306 aa16.67■□□□□ 0.26
HMGXB3-203ENST00000510472 TNS3Q68CZ2 1445 aa16.66■□□□□ 0.26
HMGXB3-203ENST00000510472 ST20-MTHFSA0A0A6YYL1 179 aa16.65■□□□□ 0.26
HMGXB3-203ENST00000510472 MEX3CQ5U5Q3 659 aaKnown RBP16.65■□□□□ 0.26
HMGXB3-203ENST00000510472 CABP1Q9NZU7 370 aa16.65■□□□□ 0.26
HMGXB3-203ENST00000510472 COL22A1Q8NFW1 1626 aaPredicted RBP16.64■□□□□ 0.25
HMGXB3-203ENST00000510472 PUS7Q96PZ0 661 aaKnown RBP16.64■□□□□ 0.25
HMGXB3-203ENST00000510472 ARHGEF10O15013 1369 aa16.64■□□□□ 0.25
HMGXB3-203ENST00000510472 ADAMTS2O95450 1211 aa16.63■□□□□ 0.25
HMGXB3-203ENST00000510472 FNBP4Q8N3X1 1017 aaPredicted RBP16.63■□□□□ 0.25
HMGXB3-203ENST00000510472 QRICH2Q9H0J4 1663 aa16.62■□□□□ 0.25
HMGXB3-203ENST00000510472 PPIP5K1Q6PFW1 1433 aa16.62■□□□□ 0.25
HMGXB3-203ENST00000510472 ZNF772Q68DY9 489 aaPredicted RBP16.62■□□□□ 0.25
HMGXB3-203ENST00000510472 CABLES1Q8TDN4 633 aa16.61■□□□□ 0.25
HMGXB3-203ENST00000510472 C8orf37Q96NL8 207 aa16.61■□□□□ 0.25
HMGXB3-203ENST00000510472 AFF2P51816 1311 aa16.61■□□□□ 0.25
HMGXB3-203ENST00000510472 SLC24A1O60721 1099 aa16.6■□□□□ 0.25
HMGXB3-203ENST00000510472 NGLY1Q96IV0 654 aa16.6■□□□□ 0.25
HMGXB3-203ENST00000510472 ATAD2Q6PL18 1390 aa16.6■□□□□ 0.25
HMGXB3-203ENST00000510472 TOPAZ1Q8N9V7 1692 aa16.59■□□□□ 0.25
HMGXB3-203ENST00000510472 LMOD2Q6P5Q4 547 aa16.59■□□□□ 0.25
HMGXB3-203ENST00000510472 BRD4O60885 1362 aaPredicted RBP16.59■□□□□ 0.25
HMGXB3-203ENST00000510472 USP47Q96K76 1375 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms