RNA–Protein interactions for RNA: ENST00000510335.5

PTPN20-224, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best)

Gene PTPN20, Length 1,153 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-224ENST00000510335 ZNF521Q96K83 1311 aa11.05□□□□□ -0.64
PTPN20-224ENST00000510335 PTPRTO14522 1441 aa11.04□□□□□ -0.64
PTPN20-224ENST00000510335 TMF1P82094 1093 aa11.04□□□□□ -0.64
PTPN20-224ENST00000510335 NGEFQ8N5V2 710 aa11.04□□□□□ -0.64
PTPN20-224ENST00000510335 ZNF579Q8NAF0 562 aaKnown RBP11.04□□□□□ -0.64
PTPN20-224ENST00000510335 ASXL1Q8IXJ9 1541 aa11.04□□□□□ -0.64
PTPN20-224ENST00000510335 NINLQ9Y2I6 1382 aa11.03□□□□□ -0.64
PTPN20-224ENST00000510335 VWDEQ8N2E2 1590 aa11.03□□□□□ -0.64
PTPN20-224ENST00000510335 RTEL1-TNFRSF6BF6WH68 1400 aa11.03□□□□□ -0.64
PTPN20-224ENST00000510335 POLR3GLQ9BT43 218 aa11.03□□□□□ -0.64
PTPN20-224ENST00000510335 UHRF1BP1LA0JNW5 1464 aa11.03□□□□□ -0.64
PTPN20-224ENST00000510335 SCAF11Q99590 1463 aaKnown RBP11.03□□□□□ -0.64
PTPN20-224ENST00000510335 ZMYM3Q14202 1370 aa11.03□□□□□ -0.64
PTPN20-224ENST00000510335 MYOM2P54296 1465 aa11.02□□□□□ -0.65
PTPN20-224ENST00000510335 C19orf67A6NJJ6 358 aa11.02□□□□□ -0.65
PTPN20-224ENST00000510335 PDAP1Q13442 181 aaKnown RBP11.02□□□□□ -0.65
PTPN20-224ENST00000510335 CENPQQ7L2Z9 268 aaPredicted RBP11.02□□□□□ -0.65
PTPN20-224ENST00000510335 MYO3AQ8NEV4 1616 aa11.02□□□□□ -0.65
PTPN20-224ENST00000510335 TET3O43151 1660 aa11.01□□□□□ -0.65
PTPN20-224ENST00000510335 GTPBP6O43824 516 aaPredicted RBP11.01□□□□□ -0.65
PTPN20-224ENST00000510335 PSEN1P49768 467 aa11.01□□□□□ -0.65
PTPN20-224ENST00000510335 CDCA8Q53HL2 280 aa11.01□□□□□ -0.65
PTPN20-224ENST00000510335 VIRMAQ69YN4 1812 aaKnown RBP11□□□□□ -0.65
PTPN20-224ENST00000510335 NBR1Q14596 966 aa11□□□□□ -0.65
PTPN20-224ENST00000510335 PLCH2O75038 1416 aa11□□□□□ -0.65
PTPN20-224ENST00000510335 ZFYVE16Q7Z3T8 1539 aa10.99□□□□□ -0.65
PTPN20-224ENST00000510335 KDM5AP29375 1690 aaKnown RBP10.99□□□□□ -0.65
PTPN20-224ENST00000510335 HNRNPMP52272 730 aaKnown RBP eCLIP10.99□□□□□ -0.65
PTPN20-224ENST00000510335 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.98□□□□□ -0.65
PTPN20-224ENST00000510335 KDM2AQ9Y2K7 1162 aa10.98□□□□□ -0.65
PTPN20-224ENST00000510335 SBNO2Q9Y2G9 1366 aa10.98□□□□□ -0.65
PTPN20-224ENST00000510335 NBPF1Q3BBV0 1214 aa10.97□□□□□ -0.65
PTPN20-224ENST00000510335 TRMT2AQ8IZ69 625 aaKnown RBP10.97□□□□□ -0.65
PTPN20-224ENST00000510335 VSIG10Q8N0Z9 540 aa10.97□□□□□ -0.65
PTPN20-224ENST00000510335 CRBNQ96SW2 442 aa10.97□□□□□ -0.65
PTPN20-224ENST00000510335 INO80Q9ULG1 1556 aaPredicted RBP10.97□□□□□ -0.65
PTPN20-224ENST00000510335 CLTCL1P53675 1640 aa10.97□□□□□ -0.65
PTPN20-224ENST00000510335 USP32Q8NFA0 1604 aa10.96□□□□□ -0.65
PTPN20-224ENST00000510335 NKTRP30414 1462 aaKnown RBP10.96□□□□□ -0.65
PTPN20-224ENST00000510335 PLEKHH1Q9ULM0 1364 aa10.96□□□□□ -0.65
PTPN20-224ENST00000510335 DUSP27Q5VZP5 1158 aa10.96□□□□□ -0.65
PTPN20-224ENST00000510335 PANK3Q9H999 370 aa10.96□□□□□ -0.65
PTPN20-224ENST00000510335 IFT172Q9UG01 1749 aa10.95□□□□□ -0.66
PTPN20-224ENST00000510335 NRXN1Q9ULB1 1477 aa10.95□□□□□ -0.66
PTPN20-224ENST00000510335 FAM161AQ3B820 660 aa10.95□□□□□ -0.66
PTPN20-224ENST00000510335 CDCA7LQ96GN5 454 aa10.95□□□□□ -0.66
PTPN20-224ENST00000510335 SETBP1Q9Y6X0 1596 aa10.94□□□□□ -0.66
PTPN20-224ENST00000510335 PPP2R1AP30153 589 aa10.94□□□□□ -0.66
PTPN20-224ENST00000510335 EVX2Q03828 476 aa10.94□□□□□ -0.66
PTPN20-224ENST00000510335 AAMPQ13685 434 aa10.94□□□□□ -0.66
PTPN20-224ENST00000510335 ZCCHC11Q5TAX3 1644 aaKnown RBP10.94□□□□□ -0.66
PTPN20-224ENST00000510335 MAP3K4Q9Y6R4 1608 aa10.94□□□□□ -0.66
PTPN20-224ENST00000510335 LMTK2Q8IWU2 1503 aa10.94□□□□□ -0.66
PTPN20-224ENST00000510335 CHD1O14646 1710 aa10.93□□□□□ -0.66
PTPN20-224ENST00000510335 NEFMP07197 916 aa10.93□□□□□ -0.66
PTPN20-224ENST00000510335 POTEHQ6S545 545 aa10.93□□□□□ -0.66
PTPN20-224ENST00000510335 ABCA9Q8IUA7 1624 aa10.92□□□□□ -0.66
PTPN20-224ENST00000510335 HAX1O00165 279 aa10.92□□□□□ -0.66
PTPN20-224ENST00000510335 GOLGA2Q08379 1002 aa10.92□□□□□ -0.66
PTPN20-224ENST00000510335 SLFN5Q08AF3 891 aa10.92□□□□□ -0.66
PTPN20-224ENST00000510335 TRPC6Q9Y210 931 aa10.92□□□□□ -0.66
PTPN20-224ENST00000510335 ABCA6Q8N139 1617 aa10.91□□□□□ -0.66
PTPN20-224ENST00000510335 WDR43Q15061 677 aaKnown RBP eCLIP10.91□□□□□ -0.66
PTPN20-224ENST00000510335 C8orf34Q49A92 452 aa10.91□□□□□ -0.66
PTPN20-224ENST00000510335 CC2D1BQ5T0F9 858 aaKnown RBP10.91□□□□□ -0.66
PTPN20-224ENST00000510335 MS4A3Q96HJ5 214 aa10.91□□□□□ -0.66
PTPN20-224ENST00000510335 KNSTRNQ9Y448 316 aa10.91□□□□□ -0.66
PTPN20-224ENST00000510335 MROH1Q8NDA8 1641 aa10.91□□□□□ -0.66
PTPN20-224ENST00000510335 POLR3AO14802 1390 aaPredicted RBP10.9□□□□□ -0.66
PTPN20-224ENST00000510335 ERVK-7P63135 1459 aa10.9□□□□□ -0.66
PTPN20-224ENST00000510335 IQSEC2Q5JU85 1478 aa10.9□□□□□ -0.66
PTPN20-224ENST00000510335 ADAMTS8Q9UP79 889 aa10.9□□□□□ -0.66
PTPN20-224ENST00000510335 EFCAB6Q5THR3 1501 aa10.89□□□□□ -0.67
PTPN20-224ENST00000510335 CGNL1Q0VF96 1302 aa10.89□□□□□ -0.67
PTPN20-224ENST00000510335 ZC3H13Q5T200 1668 aaKnown RBP10.89□□□□□ -0.67
PTPN20-224ENST00000510335 FANCAO15360 1455 aa10.89□□□□□ -0.67
PTPN20-224ENST00000510335 E9PSI1 815 aa10.89□□□□□ -0.67
PTPN20-224ENST00000510335 KANK1Q14678 1352 aa10.89□□□□□ -0.67
PTPN20-224ENST00000510335 ATP7AQ04656 1500 aa10.89□□□□□ -0.67
PTPN20-224ENST00000510335 ADGRL1O94910 1474 aa10.88□□□□□ -0.67
PTPN20-224ENST00000510335 PDE3AQ14432 1141 aa10.88□□□□□ -0.67
PTPN20-224ENST00000510335 EFCAB2Q5VUJ9 269 aa10.88□□□□□ -0.67
PTPN20-224ENST00000510335 NPM2Q86SE8 214 aaKnown RBP10.88□□□□□ -0.67
PTPN20-224ENST00000510335 CABP2Q9NPB3 220 aa10.88□□□□□ -0.67
PTPN20-224ENST00000510335 TRAPPC8Q9Y2L5 1435 aa10.88□□□□□ -0.67
PTPN20-224ENST00000510335 SHPRHQ149N8 1683 aa10.88□□□□□ -0.67
PTPN20-224ENST00000510335 ADGRB3O60242 1522 aa10.88□□□□□ -0.67
PTPN20-224ENST00000510335 MAPK8IP3Q9UPT6 1336 aa10.87□□□□□ -0.67
PTPN20-224ENST00000510335 PLIN1O60240 522 aa10.87□□□□□ -0.67
PTPN20-224ENST00000510335 CNGB1Q14028 1251 aaPredicted RBP10.87□□□□□ -0.67
PTPN20-224ENST00000510335 EFCAB3Q8N7B9 438 aa10.87□□□□□ -0.67
PTPN20-224ENST00000510335 RGL3Q3MIN7 710 aa10.86□□□□□ -0.67
PTPN20-224ENST00000510335 C20orf194Q5TEA3 1177 aa10.86□□□□□ -0.67
PTPN20-224ENST00000510335 NLRP1Q9C000 1473 aa10.86□□□□□ -0.67
PTPN20-224ENST00000510335 NFKBIBQ15653 356 aa10.85□□□□□ -0.67
PTPN20-224ENST00000510335 MFRPQ9BY79 579 aa10.85□□□□□ -0.67
PTPN20-224ENST00000510335 LAS1LQ9Y4W2 734 aaKnown RBP10.85□□□□□ -0.67
PTPN20-224ENST00000510335 ADGRB2O60241 1585 aa10.84□□□□□ -0.67
PTPN20-224ENST00000510335 KIF1BO60333 1816 aa10.84□□□□□ -0.67
PTPN20-224ENST00000510335 PUS7Q96PZ0 661 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms