RNA–Protein interactions for RNA: ENST00000510051.5

PACRGL-223, Transcript of parkin coregulated like, human

TSL 1 (best)

Gene PACRGL, Length 981 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PACRGL-223	ENST00000510051	NUTM2E	B1AL46	878 aa	Predicted RBP	28.22	■■■□□ 2.11
PACRGL-223	ENST00000510051	NUTM2A	Q8IVF1	878 aa	Predicted RBP	28.22	■■■□□ 2.11
PACRGL-223	ENST00000510051	NRXN1	Q9ULB1	1477 aa		28.21	■■■□□ 2.11
PACRGL-223	ENST00000510051	DHX57	Q6P158	1386 aa	Known RBP	28.21	■■■□□ 2.11
PACRGL-223	ENST00000510051	PLEKHH1	Q9ULM0	1364 aa		28.21	■■■□□ 2.11
PACRGL-223	ENST00000510051	NHSL1	Q5SYE7	1610 aa		28.21	■■■□□ 2.11
PACRGL-223	ENST00000510051	POTEA	Q6S8J7	498 aa		28.2	■■■□□ 2.1
PACRGL-223	ENST00000510051	DCAF11	Q8TEB1	546 aa		28.2	■■■□□ 2.1
PACRGL-223	ENST00000510051	SHPRH	Q149N8	1683 aa		28.19	■■■□□ 2.1
PACRGL-223	ENST00000510051	NUTM2F	A1L443	756 aa		28.18	■■■□□ 2.1
PACRGL-223	ENST00000510051	ESCO1	Q5FWF5	840 aa		28.18	■■■□□ 2.1
PACRGL-223	ENST00000510051	LRP6	O75581	1613 aa		28.18	■■■□□ 2.1
PACRGL-223	ENST00000510051	KNDC1	Q76NI1	1749 aa		28.16	■■■□□ 2.1
PACRGL-223	ENST00000510051	SIRT1	Q96EB6	747 aa		28.16	■■■□□ 2.1
PACRGL-223	ENST00000510051	CDC42BPG	Q6DT37	1551 aa		28.14	■■■□□ 2.1
PACRGL-223	ENST00000510051	LAMC1	P11047	1609 aa		28.14	■■■□□ 2.09
PACRGL-223	ENST00000510051	SAFB2	Q14151	953 aa	Known RBP eCLIP	28.12	■■■□□ 2.09
PACRGL-223	ENST00000510051	STAC3	Q96MF2	364 aa		28.11	■■■□□ 2.09
PACRGL-223	ENST00000510051	PRAM1	Q96QH2	718 aa		28.11	■■■□□ 2.09
PACRGL-223	ENST00000510051	SOS2	Q07890	1332 aa	Predicted RBP	28.11	■■■□□ 2.09
PACRGL-223	ENST00000510051	POGK	Q9P215	609 aa		28.1	■■■□□ 2.09
PACRGL-223	ENST00000510051	PNPLA6	Q8IY17	1366 aa		28.1	■■■□□ 2.09
PACRGL-223	ENST00000510051	ZNF772	Q68DY9	489 aa	Predicted RBP	28.08	■■■□□ 2.09
PACRGL-223	ENST00000510051	FOXO3	O43524	673 aa		28.07	■■■□□ 2.08
PACRGL-223	ENST00000510051	TRAK1	Q9UPV9	953 aa		28.07	■■■□□ 2.08
PACRGL-223	ENST00000510051	NPHP3	Q7Z494	1330 aa		28.07	■■■□□ 2.08
PACRGL-223	ENST00000510051	XPC	Q01831	940 aa	Predicted RBP	28.05	■■■□□ 2.08
PACRGL-223	ENST00000510051	C8orf37	Q96NL8	207 aa		28.02	■■■□□ 2.08
PACRGL-223	ENST00000510051	ADAMTS2	O95450	1211 aa		28.01	■■■□□ 2.07
PACRGL-223	ENST00000510051	ADGRB1	O14514	1584 aa		28.01	■■■□□ 2.07
PACRGL-223	ENST00000510051	FMN2	Q9NZ56	1722 aa		28.01	■■■□□ 2.07
PACRGL-223	ENST00000510051	AFF2	P51816	1311 aa		28	■■■□□ 2.07
PACRGL-223	ENST00000510051	DLC1	Q96QB1	1528 aa		28	■■■□□ 2.07
PACRGL-223	ENST00000510051	HIRIP3	Q9BW71	556 aa	Predicted RBP	27.97	■■■□□ 2.07
PACRGL-223	ENST00000510051	NGLY1	Q96IV0	654 aa		27.96	■■■□□ 2.07
PACRGL-223	ENST00000510051	PHF8	Q9UPP1	1060 aa		27.96	■■■□□ 2.07
PACRGL-223	ENST00000510051	PXDN	Q92626	1479 aa		27.95	■■■□□ 2.07
PACRGL-223	ENST00000510051	MINK1	Q8N4C8	1332 aa	Predicted RBP	27.95	■■■□□ 2.07
PACRGL-223	ENST00000510051	KRT28	Q7Z3Y7	464 aa		27.94	■■■□□ 2.06
PACRGL-223	ENST00000510051	RXRB	P28702	533 aa		27.93	■■■□□ 2.06
PACRGL-223	ENST00000510051	RGPD8	O14715	1765 aa	Predicted RBP	27.91	■■■□□ 2.06
PACRGL-223	ENST00000510051	KIF1A	Q12756	1690 aa		27.9	■■■□□ 2.06
PACRGL-223	ENST00000510051	PMFBP1	Q8TBY8	1022 aa		27.89	■■■□□ 2.06
PACRGL-223	ENST00000510051	QTRT2	Q9H974	415 aa	Known RBP	27.89	■■■□□ 2.06
PACRGL-223	ENST00000510051	PSME1	Q06323	249 aa		27.88	■■■□□ 2.05
PACRGL-223	ENST00000510051	SIN3A	Q96ST3	1273 aa		27.88	■■■□□ 2.05
PACRGL-223	ENST00000510051	WASL	O00401	505 aa	Predicted RBP	27.87	■■■□□ 2.05
PACRGL-223	ENST00000510051	SPATA31A3	Q5VYP0	1347 aa		27.87	■■■□□ 2.05
PACRGL-223	ENST00000510051	COL22A1	Q8NFW1	1626 aa	Predicted RBP	27.86	■■■□□ 2.05
PACRGL-223	ENST00000510051	ANKAR	Q7Z5J8	1434 aa		27.85	■■■□□ 2.05
PACRGL-223	ENST00000510051	NEUROD1	Q13562	356 aa		27.85	■■■□□ 2.05
PACRGL-223	ENST00000510051	ADGRB2	O60241	1585 aa		27.85	■■■□□ 2.05
PACRGL-223	ENST00000510051	NBPF1	Q3BBV0	1214 aa		27.84	■■■□□ 2.05
PACRGL-223	ENST00000510051	USP21	Q9UK80	565 aa		27.84	■■■□□ 2.05
PACRGL-223	ENST00000510051	EIF3A	Q14152	1382 aa	Known RBP	27.84	■■■□□ 2.05
PACRGL-223	ENST00000510051	LMOD2	Q6P5Q4	547 aa		27.83	■■■□□ 2.05
PACRGL-223	ENST00000510051	L3MBTL2	Q969R5	705 aa		27.83	■■■□□ 2.05
PACRGL-223	ENST00000510051	PLEKHG5	O94827	1062 aa		27.82	■■■□□ 2.04
PACRGL-223	ENST00000510051	RBM6	P78332	1123 aa	Known RBP	27.81	■■■□□ 2.04
PACRGL-223	ENST00000510051	PRR36	Q9H6K5	1346 aa		27.81	■■■□□ 2.04
PACRGL-223	ENST00000510051	USP32	Q8NFA0	1604 aa		27.81	■■■□□ 2.04
PACRGL-223	ENST00000510051	ARHGEF28	Q8N1W1	1705 aa	Known RBP	27.8	■■■□□ 2.04
PACRGL-223	ENST00000510051	HAP1	P54257	671 aa	Predicted RBP	27.79	■■■□□ 2.04
PACRGL-223	ENST00000510051	FNBP4	Q8N3X1	1017 aa	Predicted RBP	27.79	■■■□□ 2.04
PACRGL-223	ENST00000510051	KIAA1210	Q9ULL0	1709 aa		27.78	■■■□□ 2.04
PACRGL-223	ENST00000510051	TNS3	Q68CZ2	1445 aa		27.78	■■■□□ 2.04
PACRGL-223	ENST00000510051	TULP4	Q9NRJ4	1543 aa		27.77	■■■□□ 2.04
PACRGL-223	ENST00000510051	TRPC5	Q9UL62	973 aa	Predicted RBP	27.77	■■■□□ 2.04
PACRGL-223	ENST00000510051	SBNO1	A3KN83	1393 aa		27.76	■■■□□ 2.03
PACRGL-223	ENST00000510051	NGDN	Q8NEJ9	315 aa	Known RBP	27.76	■■■□□ 2.03
PACRGL-223	ENST00000510051	CABLES1	Q8TDN4	633 aa		27.75	■■■□□ 2.03
PACRGL-223	ENST00000510051	CDK19	Q9BWU1	502 aa		27.75	■■■□□ 2.03
PACRGL-223	ENST00000510051	GPRASP1	Q5JY77	1395 aa		27.74	■■■□□ 2.03
PACRGL-223	ENST00000510051	NUDT16	Q96DE0	195 aa	Known RBP	27.74	■■■□□ 2.03
PACRGL-223	ENST00000510051	CDK12	Q9NYV4	1490 aa	Predicted RBP	27.74	■■■□□ 2.03
PACRGL-223	ENST00000510051	TRIM26	Q12899	539 aa	Predicted RBP	27.72	■■■□□ 2.03
PACRGL-223	ENST00000510051	ARHGEF10	O15013	1369 aa		27.72	■■■□□ 2.03
PACRGL-223	ENST00000510051	MARF1	Q9Y4F3	1742 aa	Known RBP	27.7	■■■□□ 2.02
PACRGL-223	ENST00000510051	CENPJ	Q9HC77	1338 aa	Predicted RBP	27.68	■■■□□ 2.02
PACRGL-223	ENST00000510051	PAK3	O75914	559 aa	Predicted RBP	27.68	■■■□□ 2.02
PACRGL-223	ENST00000510051	RGS12	O14924	1447 aa		27.67	■■■□□ 2.02
PACRGL-223	ENST00000510051	BCL9L	Q86UU0	1499 aa		27.67	■■■□□ 2.02
PACRGL-223	ENST00000510051	ATRN	O75882	1429 aa		27.67	■■■□□ 2.02
PACRGL-223	ENST00000510051	ATP7B	P35670	1465 aa		27.66	■■■□□ 2.02
PACRGL-223	ENST00000510051	UPF1	Q92900	1129 aa	Known RBP eCLIP	27.66	■■■□□ 2.02
PACRGL-223	ENST00000510051	SRPK2	P78362	688 aa	Known RBP	27.64	■■■□□ 2.02
PACRGL-223	ENST00000510051	UNC5CL	Q8IV45	518 aa		27.64	■■■□□ 2.02
PACRGL-223	ENST00000510051	CCDC61	Q9Y6R9	512 aa		27.64	■■■□□ 2.02
PACRGL-223	ENST00000510051	ITSN1	Q15811	1721 aa		27.61	■■■□□ 2.01
PACRGL-223	ENST00000510051	TRPM3	Q9HCF6	1732 aa	Predicted RBP	27.61	■■■□□ 2.01
PACRGL-223	ENST00000510051	GJD4	Q96KN9	370 aa	Predicted RBP	27.61	■■■□□ 2.01
PACRGL-223	ENST00000510051	ROCK2	O75116	1388 aa	Known RBP	27.6	■■■□□ 2.01
PACRGL-223	ENST00000510051	CABP2	Q9NPB3	220 aa		27.6	■■■□□ 2.01
PACRGL-223	ENST00000510051	SLIT2	O94813	1529 aa		27.6	■■■□□ 2.01
PACRGL-223	ENST00000510051	ACE	P12821	1306 aa		27.6	■■■□□ 2.01
PACRGL-223	ENST00000510051	NBPF8	Q3BBV2	869 aa		27.58	■■■□□ 2.01
PACRGL-223	ENST00000510051	TRPM1	Q7Z4N2	1603 aa		27.57	■■■□□ 2
PACRGL-223	ENST00000510051	PLEKHG3	A1L390	1219 aa		27.57	■■■□□ 2
PACRGL-223	ENST00000510051	FAM83G	A6ND36	823 aa		27.57	■■■□□ 2
PACRGL-223	ENST00000510051	ALS2	Q96Q42	1657 aa		27.56	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms