RNA–Protein interactions for RNA: ENST00000509914.5

APBB3-214, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 1 (best)

Gene APBB3, Length 2,020 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-214ENST00000509914 NWD1Q149M9 1564 aa22.09■■□□□ 1.13
APBB3-214ENST00000509914 SBNO2Q9Y2G9 1366 aa22.07■■□□□ 1.12
APBB3-214ENST00000509914 QRICH2Q9H0J4 1663 aa22.06■■□□□ 1.12
APBB3-214ENST00000509914 DISP3Q9P2K9 1392 aa22.05■■□□□ 1.12
APBB3-214ENST00000509914 MINK1Q8N4C8 1332 aaPredicted RBP22.04■■□□□ 1.12
APBB3-214ENST00000509914 YTHDC1Q96MU7 727 aaKnown RBP22.03■■□□□ 1.12
APBB3-214ENST00000509914 STRCP1A6NGW2 1772 aa22.03■■□□□ 1.12
APBB3-214ENST00000509914 WASHC2AQ641Q2 1341 aa22.03■■□□□ 1.12
APBB3-214ENST00000509914 ZNF335Q9H4Z2 1342 aaPredicted RBP22.03■■□□□ 1.12
APBB3-214ENST00000509914 TMF1P82094 1093 aa22.02■■□□□ 1.12
APBB3-214ENST00000509914 RBM33Q96EV2 1170 aaKnown RBP22.02■■□□□ 1.12
APBB3-214ENST00000509914 KIF7Q2M1P5 1343 aa22.01■■□□□ 1.11
APBB3-214ENST00000509914 NKTRP30414 1462 aaKnown RBP22.01■■□□□ 1.11
APBB3-214ENST00000509914 SIPA1L2Q9P2F8 1722 aaPredicted RBP22■■□□□ 1.11
APBB3-214ENST00000509914 TULP4Q9NRJ4 1543 aa21.99■■□□□ 1.11
APBB3-214ENST00000509914 CCDC7Q96M83 1385 aa21.99■■□□□ 1.11
APBB3-214ENST00000509914 SLC24A1O60721 1099 aa21.99■■□□□ 1.11
APBB3-214ENST00000509914 PROSER2Q86WR7 435 aaPredicted RBP21.98■■□□□ 1.11
APBB3-214ENST00000509914 EVC2Q86UK5 1308 aa21.96■■□□□ 1.11
APBB3-214ENST00000509914 ADGRB2O60241 1585 aa21.94■■□□□ 1.1
APBB3-214ENST00000509914 WASLO00401 505 aaPredicted RBP21.94■■□□□ 1.1
APBB3-214ENST00000509914 POLR3GLQ9BT43 218 aa21.94■■□□□ 1.1
APBB3-214ENST00000509914 CDK19Q9BWU1 502 aa21.94■■□□□ 1.1
APBB3-214ENST00000509914 TMEM94Q12767 1356 aa21.93■■□□□ 1.1
APBB3-214ENST00000509914 CABP2Q9NPB3 220 aa21.93■■□□□ 1.1
APBB3-214ENST00000509914 CDCA8Q53HL2 280 aa21.92■■□□□ 1.1
APBB3-214ENST00000509914 LRRC7Q96NW7 1537 aa21.91■■□□□ 1.1
APBB3-214ENST00000509914 ADGRL3Q9HAR2 1447 aa21.91■■□□□ 1.1
APBB3-214ENST00000509914 NALCNQ8IZF0 1738 aa21.91■■□□□ 1.1
APBB3-214ENST00000509914 SRPK2P78362 688 aaKnown RBP21.9■■□□□ 1.1
APBB3-214ENST00000509914 PUS7Q96PZ0 661 aaKnown RBP21.9■■□□□ 1.1
APBB3-214ENST00000509914 NCOA3Q9Y6Q9 1424 aa21.89■■□□□ 1.1
APBB3-214ENST00000509914 DDX10Q13206 875 aaKnown RBP21.87■■□□□ 1.09
APBB3-214ENST00000509914 C14orf37Q86TY3 774 aa21.87■■□□□ 1.09
APBB3-214ENST00000509914 LTBP4Q8N2S1 1624 aa21.87■■□□□ 1.09
APBB3-214ENST00000509914 C19orf44Q9H6X5 657 aa21.85■■□□□ 1.09
APBB3-214ENST00000509914 PRR36Q9H6K5 1346 aa21.85■■□□□ 1.09
APBB3-214ENST00000509914 CDC42BPGQ6DT37 1551 aa21.85■■□□□ 1.09
APBB3-214ENST00000509914 XIRP1Q702N8 1843 aaKnown RBP21.84■■□□□ 1.09
APBB3-214ENST00000509914 NUTM2FA1L443 756 aa21.84■■□□□ 1.09
APBB3-214ENST00000509914 ATAD2Q6PL18 1390 aa21.84■■□□□ 1.09
APBB3-214ENST00000509914 NUDT16Q96DE0 195 aaKnown RBP21.84■■□□□ 1.09
APBB3-214ENST00000509914 ATP7BP35670 1465 aa21.82■■□□□ 1.08
APBB3-214ENST00000509914 SLC12A5Q9H2X9 1139 aa21.82■■□□□ 1.08
APBB3-214ENST00000509914 MYOM1P52179 1685 aa21.81■■□□□ 1.08
APBB3-214ENST00000509914 USP32Q8NFA0 1604 aa21.8■■□□□ 1.08
APBB3-214ENST00000509914 FMN2Q9NZ56 1722 aa21.8■■□□□ 1.08
APBB3-214ENST00000509914 TMC1Q8TDI8 760 aa21.8■■□□□ 1.08
APBB3-214ENST00000509914 CCDC61Q9Y6R9 512 aa21.79■■□□□ 1.08
APBB3-214ENST00000509914 MSH6P52701 1360 aa21.79■■□□□ 1.08
APBB3-214ENST00000509914 CABP1Q9NZU7 370 aa21.79■■□□□ 1.08
APBB3-214ENST00000509914 DCCP43146 1447 aa21.78■■□□□ 1.08
APBB3-214ENST00000509914 ANKARQ7Z5J8 1434 aa21.78■■□□□ 1.08
APBB3-214ENST00000509914 PANK3Q9H999 370 aa21.77■■□□□ 1.08
APBB3-214ENST00000509914 ATF3P18847 181 aa21.77■■□□□ 1.07
APBB3-214ENST00000509914 PPIP5K1Q6PFW1 1433 aa21.76■■□□□ 1.07
APBB3-214ENST00000509914 NINLQ9Y2I6 1382 aa21.76■■□□□ 1.07
APBB3-214ENST00000509914 CADPS2Q86UW7 1296 aa21.75■■□□□ 1.07
APBB3-214ENST00000509914 CD163L1Q9NR16 1453 aa21.74■■□□□ 1.07
APBB3-214ENST00000509914 TOPAZ1Q8N9V7 1692 aa21.74■■□□□ 1.07
APBB3-214ENST00000509914 MST1RQ04912 1400 aa21.73■■□□□ 1.07
APBB3-214ENST00000509914 PLEKHG3A1L390 1219 aa21.73■■□□□ 1.07
APBB3-214ENST00000509914 C1orf167Q5SNV9 1468 aa21.72■■□□□ 1.07
APBB3-214ENST00000509914 PER1O15534 1290 aaPredicted RBP21.72■■□□□ 1.07
APBB3-214ENST00000509914 CARD14Q9BXL6 1004 aa21.72■■□□□ 1.07
APBB3-214ENST00000509914 SUPT16HQ9Y5B9 1047 aaKnown RBP21.72■■□□□ 1.07
APBB3-214ENST00000509914 ANKRD36BQ8N2N9 1353 aa21.71■■□□□ 1.07
APBB3-214ENST00000509914 RGPD8O14715 1765 aaPredicted RBP21.71■■□□□ 1.07
APBB3-214ENST00000509914 A0A1W2PP64 1363 aa21.7■■□□□ 1.06
APBB3-214ENST00000509914 PMFBP1Q8TBY8 1022 aa21.7■■□□□ 1.06
APBB3-214ENST00000509914 ORAI2Q96SN7 254 aa21.7■■□□□ 1.06
APBB3-214ENST00000509914 CPSF1Q10570 1443 aaKnown RBP21.69■■□□□ 1.06
APBB3-214ENST00000509914 ESCO1Q5FWF5 840 aa21.69■■□□□ 1.06
APBB3-214ENST00000509914 TERF2IPQ9NYB0 399 aa21.68■■□□□ 1.06
APBB3-214ENST00000509914 ACEP12821 1306 aa21.68■■□□□ 1.06
APBB3-214ENST00000509914 PHF8Q9UPP1 1060 aa21.67■■□□□ 1.06
APBB3-214ENST00000509914 ITSN1Q15811 1721 aa21.67■■□□□ 1.06
APBB3-214ENST00000509914 SLAIN2Q9P270 581 aa21.67■■□□□ 1.06
APBB3-214ENST00000509914 POLR3AO14802 1390 aaPredicted RBP21.66■■□□□ 1.06
APBB3-214ENST00000509914 HDGFL2Q7Z4V5 671 aaPredicted RBP21.66■■□□□ 1.06
APBB3-214ENST00000509914 NSD3Q9BZ95 1437 aa21.64■■□□□ 1.05
APBB3-214ENST00000509914 NGDNQ8NEJ9 315 aaKnown RBP21.63■■□□□ 1.05
APBB3-214ENST00000509914 KTN1Q86UP2 1357 aaKnown RBP21.63■■□□□ 1.05
APBB3-214ENST00000509914 ZNF692Q9BU19 519 aaPredicted RBP21.63■■□□□ 1.05
APBB3-214ENST00000509914 KNSTRNQ9Y448 316 aa21.62■■□□□ 1.05
APBB3-214ENST00000509914 CCER2I3L3R5 266 aa21.61■■□□□ 1.05
APBB3-214ENST00000509914 AMER1Q5JTC6 1135 aaPredicted RBP21.61■■□□□ 1.05
APBB3-214ENST00000509914 BRINP3Q76B58 766 aa21.61■■□□□ 1.05
APBB3-214ENST00000509914 CERKQ8TCT0 537 aa21.6■■□□□ 1.05
APBB3-214ENST00000509914 AKAP12Q02952 1782 aa21.6■■□□□ 1.05
APBB3-214ENST00000509914 USP6P35125 1406 aa21.6■■□□□ 1.05
APBB3-214ENST00000509914 FOXO3O43524 673 aa21.6■■□□□ 1.05
APBB3-214ENST00000509914 ANP32EQ9BTT0 268 aa21.6■■□□□ 1.05
APBB3-214ENST00000509914 SSH2Q76I76 1423 aa21.59■■□□□ 1.05
APBB3-214ENST00000509914 EDC4Q6P2E9 1401 aaKnown RBP21.58■■□□□ 1.05
APBB3-214ENST00000509914 IQSEC2Q5JU85 1478 aa21.58■■□□□ 1.05
APBB3-214ENST00000509914 MON2Q7Z3U7 1717 aa21.58■■□□□ 1.05
APBB3-214ENST00000509914 KIF1AQ12756 1690 aa21.57■■□□□ 1.04
APBB3-214ENST00000509914 TSHZ2Q9NRE2 1034 aa21.57■■□□□ 1.04
APBB3-214ENST00000509914 CNGB1Q14028 1251 aaPredicted RBP21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms