RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 PLEKHH1Q9ULM0 1364 aa23.98■■□□□ 1.43
RAB40C-202ENST00000509637 RBM6P78332 1123 aaKnown RBP23.96■■□□□ 1.43
RAB40C-202ENST00000509637 TMEM132EQ6IEE7 984 aa23.96■■□□□ 1.43
RAB40C-202ENST00000509637 NGLY1Q96IV0 654 aa23.96■■□□□ 1.43
RAB40C-202ENST00000509637 MPHOSPH9Q99550 1183 aa23.96■■□□□ 1.43
RAB40C-202ENST00000509637 STK26Q9P289 416 aa23.95■■□□□ 1.42
RAB40C-202ENST00000509637 XPCQ01831 940 aaPredicted RBP23.94■■□□□ 1.42
RAB40C-202ENST00000509637 NUTM2FA1L443 756 aa23.93■■□□□ 1.42
RAB40C-202ENST00000509637 IFT172Q9UG01 1749 aa23.93■■□□□ 1.42
RAB40C-202ENST00000509637 ESCO1Q5FWF5 840 aa23.92■■□□□ 1.42
RAB40C-202ENST00000509637 PXDNQ92626 1479 aa23.92■■□□□ 1.42
RAB40C-202ENST00000509637 FOXO3O43524 673 aa23.91■■□□□ 1.42
RAB40C-202ENST00000509637 FNBP4Q8N3X1 1017 aaPredicted RBP23.91■■□□□ 1.42
RAB40C-202ENST00000509637 TECPR2O15040 1411 aa23.91■■□□□ 1.42
RAB40C-202ENST00000509637 CDC42BPGQ6DT37 1551 aa23.91■■□□□ 1.42
RAB40C-202ENST00000509637 LRPPRCP42704 1394 aaKnown RBP23.91■■□□□ 1.42
RAB40C-202ENST00000509637 MYOM2P54296 1465 aa23.9■■□□□ 1.42
RAB40C-202ENST00000509637 COL22A1Q8NFW1 1626 aaPredicted RBP23.9■■□□□ 1.42
RAB40C-202ENST00000509637 CCDC144AA2RUR9 1427 aa23.89■■□□□ 1.41
RAB40C-202ENST00000509637 ABCC11Q96J66 1382 aa23.89■■□□□ 1.41
RAB40C-202ENST00000509637 USP21Q9UK80 565 aa23.88■■□□□ 1.41
RAB40C-202ENST00000509637 PIK3C2GO75747 1445 aa23.87■■□□□ 1.41
RAB40C-202ENST00000509637 ATRNO75882 1429 aa23.86■■□□□ 1.41
RAB40C-202ENST00000509637 BCL9LQ86UU0 1499 aa23.86■■□□□ 1.41
RAB40C-202ENST00000509637 ANKRD30BQ9BXX2 1392 aa23.85■■□□□ 1.41
RAB40C-202ENST00000509637 NPHP3Q7Z494 1330 aa23.84■■□□□ 1.41
RAB40C-202ENST00000509637 YTHDC2Q9H6S0 1430 aaKnown RBP23.83■■□□□ 1.4
RAB40C-202ENST00000509637 TRPC5Q9UL62 973 aaPredicted RBP23.82■■□□□ 1.4
RAB40C-202ENST00000509637 KNDC1Q76NI1 1749 aa23.81■■□□□ 1.4
RAB40C-202ENST00000509637 CFAP70Q5T0N1 1121 aa23.81■■□□□ 1.4
RAB40C-202ENST00000509637 C14orf93Q9H972 538 aaKnown RBP23.81■■□□□ 1.4
RAB40C-202ENST00000509637 FMN2Q9NZ56 1722 aa23.8■■□□□ 1.4
RAB40C-202ENST00000509637 RGPD8O14715 1765 aaPredicted RBP23.78■■□□□ 1.4
RAB40C-202ENST00000509637 NRXN1Q9ULB1 1477 aa23.78■■□□□ 1.4
RAB40C-202ENST00000509637 SPATA31A3Q5VYP0 1347 aa23.78■■□□□ 1.4
RAB40C-202ENST00000509637 MARF1Q9Y4F3 1742 aaKnown RBP23.77■■□□□ 1.4
RAB40C-202ENST00000509637 SIRT1Q96EB6 747 aa23.76■■□□□ 1.39
RAB40C-202ENST00000509637 KRT28Q7Z3Y7 464 aa23.74■■□□□ 1.39
RAB40C-202ENST00000509637 CABLES1Q8TDN4 633 aa23.72■■□□□ 1.39
RAB40C-202ENST00000509637 GJD4Q96KN9 370 aaPredicted RBP23.72■■□□□ 1.39
RAB40C-202ENST00000509637 SLIT2O94813 1529 aa23.72■■□□□ 1.39
RAB40C-202ENST00000509637 SAFB2Q14151 953 aaKnown RBP eCLIP23.71■■□□□ 1.39
RAB40C-202ENST00000509637 ATAD2Q6PL18 1390 aa23.7■■□□□ 1.38
RAB40C-202ENST00000509637 GLI3P10071 1580 aa23.69■■□□□ 1.38
RAB40C-202ENST00000509637 PRAM1Q96QH2 718 aa23.69■■□□□ 1.38
RAB40C-202ENST00000509637 PHF8Q9UPP1 1060 aa23.69■■□□□ 1.38
RAB40C-202ENST00000509637 RAB3GAP2Q9H2M9 1393 aa23.67■■□□□ 1.38
RAB40C-202ENST00000509637 USP32Q8NFA0 1604 aa23.67■■□□□ 1.38
RAB40C-202ENST00000509637 UNC5CLQ8IV45 518 aa23.67■■□□□ 1.38
RAB40C-202ENST00000509637 KIF1AQ12756 1690 aa23.67■■□□□ 1.38
RAB40C-202ENST00000509637 RALGAPBQ86X10 1494 aa23.66■■□□□ 1.38
RAB40C-202ENST00000509637 DHX57Q6P158 1386 aaKnown RBP23.65■■□□□ 1.38
RAB40C-202ENST00000509637 PLEKHG5O94827 1062 aa23.65■■□□□ 1.38
RAB40C-202ENST00000509637 ADGRB1O14514 1584 aa23.65■■□□□ 1.38
RAB40C-202ENST00000509637 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.64■■□□□ 1.38
RAB40C-202ENST00000509637 TNS3Q68CZ2 1445 aa23.63■■□□□ 1.37
RAB40C-202ENST00000509637 PMFBP1Q8TBY8 1022 aa23.63■■□□□ 1.37
RAB40C-202ENST00000509637 EP400Q96L91 3159 aa23.63■■□□□ 1.37
RAB40C-202ENST00000509637 PRR36Q9H6K5 1346 aa23.62■■□□□ 1.37
RAB40C-202ENST00000509637 BRWD3Q6RI45 1802 aa23.61■■□□□ 1.37
RAB40C-202ENST00000509637 DLC1Q96QB1 1528 aa23.6■■□□□ 1.37
RAB40C-202ENST00000509637 HIRIP3Q9BW71 556 aaPredicted RBP23.6■■□□□ 1.37
RAB40C-202ENST00000509637 FAM83GA6ND36 823 aa23.59■■□□□ 1.37
RAB40C-202ENST00000509637 TRAK1Q9UPV9 953 aa23.59■■□□□ 1.37
RAB40C-202ENST00000509637 SBNO1A3KN83 1393 aa23.59■■□□□ 1.37
RAB40C-202ENST00000509637 ABCA3Q99758 1704 aa23.59■■□□□ 1.37
RAB40C-202ENST00000509637 KDM2AQ9Y2K7 1162 aa23.57■■□□□ 1.36
RAB40C-202ENST00000509637 PSME1Q06323 249 aa23.56■■□□□ 1.36
RAB40C-202ENST00000509637 POGKQ9P215 609 aa23.56■■□□□ 1.36
RAB40C-202ENST00000509637 TRPM3Q9HCF6 1732 aaPredicted RBP23.56■■□□□ 1.36
RAB40C-202ENST00000509637 ONECUT3O60422 494 aaPredicted RBP23.55■■□□□ 1.36
RAB40C-202ENST00000509637 VPS72Q15906 364 aa23.55■■□□□ 1.36
RAB40C-202ENST00000509637 SEPT12Q8IYM1 358 aa23.55■■□□□ 1.36
RAB40C-202ENST00000509637 ADGRB2O60241 1585 aa23.55■■□□□ 1.36
RAB40C-202ENST00000509637 MINK1Q8N4C8 1332 aaPredicted RBP23.55■■□□□ 1.36
RAB40C-202ENST00000509637 PLCH1Q4KWH8 1693 aa23.54■■□□□ 1.36
RAB40C-202ENST00000509637 ANKARQ7Z5J8 1434 aa23.54■■□□□ 1.36
RAB40C-202ENST00000509637 LMOD2Q6P5Q4 547 aa23.54■■□□□ 1.36
RAB40C-202ENST00000509637 SRCAPQ6ZRS2 3230 aa23.54■■□□□ 1.36
RAB40C-202ENST00000509637 DEFB132Q7Z7B7 95 aa23.53■■□□□ 1.36
RAB40C-202ENST00000509637 DCAF11Q8TEB1 546 aa23.53■■□□□ 1.36
RAB40C-202ENST00000509637 CCDC125Q86Z20 511 aa23.52■■□□□ 1.36
RAB40C-202ENST00000509637 ALS2Q96Q42 1657 aa23.5■■□□□ 1.35
RAB40C-202ENST00000509637 WASLO00401 505 aaPredicted RBP23.49■■□□□ 1.35
RAB40C-202ENST00000509637 HAP1P54257 671 aaPredicted RBP23.49■■□□□ 1.35
RAB40C-202ENST00000509637 ZRANB1Q9UGI0 708 aa23.49■■□□□ 1.35
RAB40C-202ENST00000509637 NWD2Q9ULI1 1742 aa23.49■■□□□ 1.35
RAB40C-202ENST00000509637 ACIN1Q9UKV3 1341 aaKnown RBP23.49■■□□□ 1.35
RAB40C-202ENST00000509637 ARHGEF10O15013 1369 aa23.49■■□□□ 1.35
RAB40C-202ENST00000509637 BLMP54132 1417 aaPredicted RBP23.48■■□□□ 1.35
RAB40C-202ENST00000509637 NRAPQ86VF7 1730 aa23.47■■□□□ 1.35
RAB40C-202ENST00000509637 TULP4Q9NRJ4 1543 aa23.45■■□□□ 1.34
RAB40C-202ENST00000509637 CRYBG1Q9Y4K1 1723 aa23.45■■□□□ 1.34
RAB40C-202ENST00000509637 BTG4Q9NY30 223 aa23.44■■□□□ 1.34
RAB40C-202ENST00000509637 CCDC9Q9Y3X0 531 aaKnown RBP23.44■■□□□ 1.34
RAB40C-202ENST00000509637 FAM98CQ17RN3 349 aaKnown RBP23.42■■□□□ 1.34
RAB40C-202ENST00000509637 KRT27Q7Z3Y8 459 aa23.42■■□□□ 1.34
RAB40C-202ENST00000509637 FAM182BQ5T319 152 aa23.41■■□□□ 1.34
RAB40C-202ENST00000509637 ARHGEF28Q8N1W1 1705 aaKnown RBP23.41■■□□□ 1.34
RAB40C-202ENST00000509637 ATP7BP35670 1465 aa23.39■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms