RNA–Protein interactions for RNA: ENST00000509581.5

PDCD6-207, Transcript of programmed cell death 6, humanhuman

TSL 1 (best) BASIC

Gene PDCD6, Length 1,156 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-207ENST00000509581 NBPF8Q3BBV2 869 aa25.66■■□□□ 1.7
PDCD6-207ENST00000509581 PRAM1Q96QH2 718 aa25.64■■□□□ 1.7
PDCD6-207ENST00000509581 EIF3AQ14152 1382 aaKnown RBP25.64■■□□□ 1.69
PDCD6-207ENST00000509581 CDC42BPGQ6DT37 1551 aa25.64■■□□□ 1.69
PDCD6-207ENST00000509581 WAPLQ7Z5K2 1190 aa25.63■■□□□ 1.69
PDCD6-207ENST00000509581 GPRASP1Q5JY77 1395 aa25.63■■□□□ 1.69
PDCD6-207ENST00000509581 PLEKHH1Q9ULM0 1364 aa25.6■■□□□ 1.69
PDCD6-207ENST00000509581 CARD11Q9BXL7 1154 aa25.6■■□□□ 1.69
PDCD6-207ENST00000509581 SCAF1Q9H7N4 1312 aaKnown RBP25.6■■□□□ 1.69
PDCD6-207ENST00000509581 ADGRB2O60241 1585 aa25.58■■□□□ 1.69
PDCD6-207ENST00000509581 PIP4K2BP78356 416 aa25.57■■□□□ 1.68
PDCD6-207ENST00000509581 SAFB2Q14151 953 aaKnown RBP eCLIP25.57■■□□□ 1.68
PDCD6-207ENST00000509581 QRICH2Q9H0J4 1663 aa25.56■■□□□ 1.68
PDCD6-207ENST00000509581 SLAIN2Q9P270 581 aa25.56■■□□□ 1.68
PDCD6-207ENST00000509581 CENPJQ9HC77 1338 aaPredicted RBP25.55■■□□□ 1.68
PDCD6-207ENST00000509581 FMN2Q9NZ56 1722 aa25.54■■□□□ 1.68
PDCD6-207ENST00000509581 ROBO1Q9Y6N7 1651 aa25.54■■□□□ 1.68
PDCD6-207ENST00000509581 MST1RQ04912 1400 aa25.53■■□□□ 1.68
PDCD6-207ENST00000509581 MINK1Q8N4C8 1332 aaPredicted RBP25.51■■□□□ 1.67
PDCD6-207ENST00000509581 C1orf167Q5SNV9 1468 aa25.48■■□□□ 1.67
PDCD6-207ENST00000509581 ILDR1Q86SU0 546 aaPredicted RBP25.45■■□□□ 1.66
PDCD6-207ENST00000509581 HIRIP3Q9BW71 556 aaPredicted RBP25.45■■□□□ 1.66
PDCD6-207ENST00000509581 ITSN1Q15811 1721 aa25.45■■□□□ 1.66
PDCD6-207ENST00000509581 ANKARQ7Z5J8 1434 aa25.45■■□□□ 1.66
PDCD6-207ENST00000509581 TULP4Q9NRJ4 1543 aa25.44■■□□□ 1.66
PDCD6-207ENST00000509581 WASLO00401 505 aaPredicted RBP25.44■■□□□ 1.66
PDCD6-207ENST00000509581 SLC24A1O60721 1099 aa25.44■■□□□ 1.66
PDCD6-207ENST00000509581 RGPD8O14715 1765 aaPredicted RBP25.44■■□□□ 1.66
PDCD6-207ENST00000509581 KIF1AQ12756 1690 aa25.43■■□□□ 1.66
PDCD6-207ENST00000509581 SBNO2Q9Y2G9 1366 aa25.43■■□□□ 1.66
PDCD6-207ENST00000509581 PHLPP1O60346 1717 aa25.41■■□□□ 1.66
PDCD6-207ENST00000509581 USP47Q96K76 1375 aa25.41■■□□□ 1.66
PDCD6-207ENST00000509581 EVC2Q86UK5 1308 aa25.4■■□□□ 1.66
PDCD6-207ENST00000509581 BRINP3Q76B58 766 aa25.4■■□□□ 1.66
PDCD6-207ENST00000509581 NHSL1Q5SYE7 1610 aa25.39■■□□□ 1.66
PDCD6-207ENST00000509581 AHDC1Q5TGY3 1603 aaPredicted RBP25.39■■□□□ 1.66
PDCD6-207ENST00000509581 NUTM2FA1L443 756 aa25.38■■□□□ 1.65
PDCD6-207ENST00000509581 ESCO1Q5FWF5 840 aa25.38■■□□□ 1.65
PDCD6-207ENST00000509581 CDK19Q9BWU1 502 aa25.37■■□□□ 1.65
PDCD6-207ENST00000509581 USP32Q8NFA0 1604 aa25.37■■□□□ 1.65
PDCD6-207ENST00000509581 SRPK2P78362 688 aaKnown RBP25.35■■□□□ 1.65
PDCD6-207ENST00000509581 ORAI2Q96SN7 254 aa25.34■■□□□ 1.65
PDCD6-207ENST00000509581 ST20-MTHFSA0A0A6YYL1 179 aa25.33■■□□□ 1.65
PDCD6-207ENST00000509581 HSPA1LP34931 641 aa25.33■■□□□ 1.65
PDCD6-207ENST00000509581 ATP7BP35670 1465 aa25.33■■□□□ 1.65
PDCD6-207ENST00000509581 NPHP3Q7Z494 1330 aa25.33■■□□□ 1.64
PDCD6-207ENST00000509581 TOPAZ1Q8N9V7 1692 aa25.32■■□□□ 1.64
PDCD6-207ENST00000509581 EIF4G2P78344 907 aaKnown RBP eCLIP25.31■■□□□ 1.64
PDCD6-207ENST00000509581 NUDT16Q96DE0 195 aaKnown RBP25.31■■□□□ 1.64
PDCD6-207ENST00000509581 PHF8Q9UPP1 1060 aa25.31■■□□□ 1.64
PDCD6-207ENST00000509581 CCDC61Q9Y6R9 512 aa25.29■■□□□ 1.64
PDCD6-207ENST00000509581 COL16A1Q07092 1604 aaPredicted RBP25.29■■□□□ 1.64
PDCD6-207ENST00000509581 ATAD2Q6PL18 1390 aa25.29■■□□□ 1.64
PDCD6-207ENST00000509581 PRR36Q9H6K5 1346 aa25.27■■□□□ 1.64
PDCD6-207ENST00000509581 TMF1P82094 1093 aa25.26■■□□□ 1.63
PDCD6-207ENST00000509581 CABP2Q9NPB3 220 aa25.26■■□□□ 1.63
PDCD6-207ENST00000509581 ZEB1P37275 1124 aaPredicted RBP25.25■■□□□ 1.63
PDCD6-207ENST00000509581 CDCA8Q53HL2 280 aa25.25■■□□□ 1.63
PDCD6-207ENST00000509581 PUS7Q96PZ0 661 aaKnown RBP25.25■■□□□ 1.63
PDCD6-207ENST00000509581 FOXO3O43524 673 aa25.24■■□□□ 1.63
PDCD6-207ENST00000509581 TESK2Q96S53 571 aa25.24■■□□□ 1.63
PDCD6-207ENST00000509581 PPIP5K1Q6PFW1 1433 aa25.23■■□□□ 1.63
PDCD6-207ENST00000509581 PSME1Q06323 249 aa25.23■■□□□ 1.63
PDCD6-207ENST00000509581 NGDNQ8NEJ9 315 aaKnown RBP25.23■■□□□ 1.63
PDCD6-207ENST00000509581 LRRC59Q96AG4 307 aaKnown RBP25.23■■□□□ 1.63
PDCD6-207ENST00000509581 SOS2Q07890 1332 aaPredicted RBP25.22■■□□□ 1.63
PDCD6-207ENST00000509581 PMFBP1Q8TBY8 1022 aa25.22■■□□□ 1.63
PDCD6-207ENST00000509581 SHPRHQ149N8 1683 aa25.21■■□□□ 1.63
PDCD6-207ENST00000509581 JCADQ9P266 1359 aa25.2■■□□□ 1.63
PDCD6-207ENST00000509581 PLEKHG3A1L390 1219 aa25.2■■□□□ 1.62
PDCD6-207ENST00000509581 PXDNQ92626 1479 aa25.2■■□□□ 1.62
PDCD6-207ENST00000509581 HSPA5P11021 654 aaKnown RBP25.19■■□□□ 1.62
PDCD6-207ENST00000509581 DDX17Q92841 729 aaKnown RBP25.19■■□□□ 1.62
PDCD6-207ENST00000509581 KRT28Q7Z3Y7 464 aa25.17■■□□□ 1.62
PDCD6-207ENST00000509581 POLR3AO14802 1390 aaPredicted RBP25.17■■□□□ 1.62
PDCD6-207ENST00000509581 NINLQ9Y2I6 1382 aa25.17■■□□□ 1.62
PDCD6-207ENST00000509581 AKAP12Q02952 1782 aa25.15■■□□□ 1.62
PDCD6-207ENST00000509581 SBNO1A3KN83 1393 aa25.15■■□□□ 1.62
PDCD6-207ENST00000509581 ACEP12821 1306 aa25.14■■□□□ 1.62
PDCD6-207ENST00000509581 CABP1Q9NZU7 370 aa25.14■■□□□ 1.62
PDCD6-207ENST00000509581 TRPM3Q9HCF6 1732 aaPredicted RBP25.13■■□□□ 1.61
PDCD6-207ENST00000509581 XPCQ01831 940 aaPredicted RBP25.13■■□□□ 1.61
PDCD6-207ENST00000509581 BRD4O60885 1362 aaPredicted RBP25.13■■□□□ 1.61
PDCD6-207ENST00000509581 DISP3Q9P2K9 1392 aa25.13■■□□□ 1.61
PDCD6-207ENST00000509581 TNS3Q68CZ2 1445 aa25.12■■□□□ 1.61
PDCD6-207ENST00000509581 SPATA31A6Q5VVP1 1343 aa25.12■■□□□ 1.61
PDCD6-207ENST00000509581 TMC1Q8TDI8 760 aa25.11■■□□□ 1.61
PDCD6-207ENST00000509581 ZNF692Q9BU19 519 aaPredicted RBP25.11■■□□□ 1.61
PDCD6-207ENST00000509581 ARHGEF10O15013 1369 aa25.1■■□□□ 1.61
PDCD6-207ENST00000509581 COL22A1Q8NFW1 1626 aaPredicted RBP25.1■■□□□ 1.61
PDCD6-207ENST00000509581 SPATA31A3Q5VYP0 1347 aa25.1■■□□□ 1.61
PDCD6-207ENST00000509581 PNPLA6Q8IY17 1366 aa25.09■■□□□ 1.61
PDCD6-207ENST00000509581 ALS2Q96Q42 1657 aa25.08■■□□□ 1.61
PDCD6-207ENST00000509581 HDGFL2Q7Z4V5 671 aaPredicted RBP25.08■■□□□ 1.61
PDCD6-207ENST00000509581 TERF2IPQ9NYB0 399 aa25.08■■□□□ 1.61
PDCD6-207ENST00000509581 MON2Q7Z3U7 1717 aa25.08■■□□□ 1.61
PDCD6-207ENST00000509581 PAK3O75914 559 aaPredicted RBP25.07■■□□□ 1.6
PDCD6-207ENST00000509581 USP6P35125 1406 aa25.06■■□□□ 1.6
PDCD6-207ENST00000509581 LMOD2Q6P5Q4 547 aa25.05■■□□□ 1.6
PDCD6-207ENST00000509581 KTN1Q86UP2 1357 aaKnown RBP25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms