RNA–Protein interactions for RNA: ENST00000509534.5

SIL1-213, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 5 BASIC

Gene SIL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-213ENST00000509534 CDCA8Q53HL2 280 aa23.5■■□□□ 1.35
SIL1-213ENST00000509534 WAPLQ7Z5K2 1190 aa23.5■■□□□ 1.35
SIL1-213ENST00000509534 ROBO2Q9HCK4 1378 aa23.49■■□□□ 1.35
SIL1-213ENST00000509534 PTCH1Q13635 1447 aa23.49■■□□□ 1.35
SIL1-213ENST00000509534 DDX10Q13206 875 aaKnown RBP23.49■■□□□ 1.35
SIL1-213ENST00000509534 PLEKHH1Q9ULM0 1364 aa23.49■■□□□ 1.35
SIL1-213ENST00000509534 MINK1Q8N4C8 1332 aaPredicted RBP23.47■■□□□ 1.35
SIL1-213ENST00000509534 EVC2Q86UK5 1308 aa23.46■■□□□ 1.35
SIL1-213ENST00000509534 KCNA6P17658 529 aa23.45■■□□□ 1.34
SIL1-213ENST00000509534 TULP4Q9NRJ4 1543 aa23.44■■□□□ 1.34
SIL1-213ENST00000509534 NWD1Q149M9 1564 aa23.44■■□□□ 1.34
SIL1-213ENST00000509534 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.4■■□□□ 1.34
SIL1-213ENST00000509534 DMRT2Q9Y5R5 561 aa23.39■■□□□ 1.33
SIL1-213ENST00000509534 SRPK2P78362 688 aaKnown RBP23.38■■□□□ 1.33
SIL1-213ENST00000509534 GTF3C3Q9Y5Q9 886 aa23.38■■□□□ 1.33
SIL1-213ENST00000509534 ADGRB2O60241 1585 aa23.38■■□□□ 1.33
SIL1-213ENST00000509534 NKTRP30414 1462 aaKnown RBP23.36■■□□□ 1.33
SIL1-213ENST00000509534 AEBP2Q6ZN18 517 aaPredicted RBP23.36■■□□□ 1.33
SIL1-213ENST00000509534 MYOM1P52179 1685 aa23.36■■□□□ 1.33
SIL1-213ENST00000509534 PUS7Q96PZ0 661 aaKnown RBP23.36■■□□□ 1.33
SIL1-213ENST00000509534 CDK19Q9BWU1 502 aa23.36■■□□□ 1.33
SIL1-213ENST00000509534 CABP2Q9NPB3 220 aa23.35■■□□□ 1.33
SIL1-213ENST00000509534 STRCP1A6NGW2 1772 aa23.34■■□□□ 1.33
SIL1-213ENST00000509534 WASLO00401 505 aaPredicted RBP23.33■■□□□ 1.33
SIL1-213ENST00000509534 NALCNQ8IZF0 1738 aa23.32■■□□□ 1.32
SIL1-213ENST00000509534 ATAD2Q6PL18 1390 aa23.32■■□□□ 1.32
SIL1-213ENST00000509534 PROSER2Q86WR7 435 aaPredicted RBP23.31■■□□□ 1.32
SIL1-213ENST00000509534 TMC1Q8TDI8 760 aa23.3■■□□□ 1.32
SIL1-213ENST00000509534 C14orf37Q86TY3 774 aa23.29■■□□□ 1.32
SIL1-213ENST00000509534 RBM33Q96EV2 1170 aaKnown RBP23.28■■□□□ 1.32
SIL1-213ENST00000509534 ADGRL3Q9HAR2 1447 aa23.27■■□□□ 1.32
SIL1-213ENST00000509534 NINLQ9Y2I6 1382 aa23.26■■□□□ 1.31
SIL1-213ENST00000509534 PANK3Q9H999 370 aa23.26■■□□□ 1.31
SIL1-213ENST00000509534 CDC42BPGQ6DT37 1551 aa23.26■■□□□ 1.31
SIL1-213ENST00000509534 ZNF335Q9H4Z2 1342 aaPredicted RBP23.26■■□□□ 1.31
SIL1-213ENST00000509534 FMN2Q9NZ56 1722 aa23.23■■□□□ 1.31
SIL1-213ENST00000509534 NUDT16Q96DE0 195 aaKnown RBP23.23■■□□□ 1.31
SIL1-213ENST00000509534 SLC12A5Q9H2X9 1139 aa23.23■■□□□ 1.31
SIL1-213ENST00000509534 TMEM94Q12767 1356 aa23.23■■□□□ 1.31
SIL1-213ENST00000509534 ATP7BP35670 1465 aa23.22■■□□□ 1.31
SIL1-213ENST00000509534 ITSN1Q15811 1721 aa23.21■■□□□ 1.31
SIL1-213ENST00000509534 NCOA3Q9Y6Q9 1424 aa23.21■■□□□ 1.31
SIL1-213ENST00000509534 NUTM2FA1L443 756 aa23.2■■□□□ 1.3
SIL1-213ENST00000509534 PPIP5K1Q6PFW1 1433 aa23.2■■□□□ 1.3
SIL1-213ENST00000509534 ANP32CO43423 234 aa23.19■■□□□ 1.3
SIL1-213ENST00000509534 CABP1Q9NZU7 370 aa23.19■■□□□ 1.3
SIL1-213ENST00000509534 CCDC61Q9Y6R9 512 aa23.19■■□□□ 1.3
SIL1-213ENST00000509534 USP32Q8NFA0 1604 aa23.19■■□□□ 1.3
SIL1-213ENST00000509534 TOPAZ1Q8N9V7 1692 aa23.19■■□□□ 1.3
SIL1-213ENST00000509534 PRR36Q9H6K5 1346 aa23.19■■□□□ 1.3
SIL1-213ENST00000509534 ANKARQ7Z5J8 1434 aa23.18■■□□□ 1.3
SIL1-213ENST00000509534 ANKRD36BQ8N2N9 1353 aa23.18■■□□□ 1.3
SIL1-213ENST00000509534 XIRP1Q702N8 1843 aaKnown RBP23.18■■□□□ 1.3
SIL1-213ENST00000509534 RGPD8O14715 1765 aaPredicted RBP23.17■■□□□ 1.3
SIL1-213ENST00000509534 LRRC7Q96NW7 1537 aa23.17■■□□□ 1.3
SIL1-213ENST00000509534 TERF2IPQ9NYB0 399 aa23.17■■□□□ 1.3
SIL1-213ENST00000509534 KNSTRNQ9Y448 316 aa23.17■■□□□ 1.3
SIL1-213ENST00000509534 C19orf44Q9H6X5 657 aa23.16■■□□□ 1.3
SIL1-213ENST00000509534 PER1O15534 1290 aaPredicted RBP23.15■■□□□ 1.3
SIL1-213ENST00000509534 HDGFL2Q7Z4V5 671 aaPredicted RBP23.15■■□□□ 1.3
SIL1-213ENST00000509534 A0A1W2PP64 1363 aa23.15■■□□□ 1.3
SIL1-213ENST00000509534 MSH6P52701 1360 aa23.13■■□□□ 1.29
SIL1-213ENST00000509534 CD163L1Q9NR16 1453 aa23.13■■□□□ 1.29
SIL1-213ENST00000509534 CNGB1Q14028 1251 aaPredicted RBP23.13■■□□□ 1.29
SIL1-213ENST00000509534 DCCP43146 1447 aa23.13■■□□□ 1.29
SIL1-213ENST00000509534 NSD3Q9BZ95 1437 aa23.13■■□□□ 1.29
SIL1-213ENST00000509534 ATF3P18847 181 aa23.12■■□□□ 1.29
SIL1-213ENST00000509534 CARD14Q9BXL6 1004 aa23.11■■□□□ 1.29
SIL1-213ENST00000509534 AKAP12Q02952 1782 aa23.11■■□□□ 1.29
SIL1-213ENST00000509534 KTN1Q86UP2 1357 aaKnown RBP23.1■■□□□ 1.29
SIL1-213ENST00000509534 PLEKHG3A1L390 1219 aa23.09■■□□□ 1.29
SIL1-213ENST00000509534 MON2Q7Z3U7 1717 aa23.08■■□□□ 1.28
SIL1-213ENST00000509534 CADPS2Q86UW7 1296 aa23.08■■□□□ 1.28
SIL1-213ENST00000509534 PRKRIP1Q9H875 184 aaPredicted RBP23.08■■□□□ 1.28
SIL1-213ENST00000509534 CPSF1Q10570 1443 aaKnown RBP23.07■■□□□ 1.28
SIL1-213ENST00000509534 CCER2I3L3R5 266 aa23.07■■□□□ 1.28
SIL1-213ENST00000509534 CC2D1BQ5T0F9 858 aaKnown RBP23.07■■□□□ 1.28
SIL1-213ENST00000509534 PMFBP1Q8TBY8 1022 aa23.06■■□□□ 1.28
SIL1-213ENST00000509534 ACEP12821 1306 aa23.06■■□□□ 1.28
SIL1-213ENST00000509534 CGNL1Q0VF96 1302 aa23.06■■□□□ 1.28
SIL1-213ENST00000509534 AMER1Q5JTC6 1135 aaPredicted RBP23.05■■□□□ 1.28
SIL1-213ENST00000509534 ZNF692Q9BU19 519 aaPredicted RBP23.05■■□□□ 1.28
SIL1-213ENST00000509534 LTBP4Q8N2S1 1624 aa23.05■■□□□ 1.28
SIL1-213ENST00000509534 ESCO1Q5FWF5 840 aa23.05■■□□□ 1.28
SIL1-213ENST00000509534 NGDNQ8NEJ9 315 aaKnown RBP23.05■■□□□ 1.28
SIL1-213ENST00000509534 NPC1L1Q9UHC9 1359 aa23.04■■□□□ 1.28
SIL1-213ENST00000509534 C1orf167Q5SNV9 1468 aa23.04■■□□□ 1.28
SIL1-213ENST00000509534 MST1RQ04912 1400 aa23.03■■□□□ 1.28
SIL1-213ENST00000509534 PHF8Q9UPP1 1060 aa23.03■■□□□ 1.28
SIL1-213ENST00000509534 EDC4Q6P2E9 1401 aaKnown RBP23.03■■□□□ 1.28
SIL1-213ENST00000509534 RALBP1Q15311 655 aa23.02■■□□□ 1.28
SIL1-213ENST00000509534 POLR3AO14802 1390 aaPredicted RBP23.02■■□□□ 1.28
SIL1-213ENST00000509534 KIF20BQ96Q89 1820 aa23.02■■□□□ 1.28
SIL1-213ENST00000509534 KIF1AQ12756 1690 aa23.01■■□□□ 1.27
SIL1-213ENST00000509534 NSD2O96028 1365 aa23■■□□□ 1.27
SIL1-213ENST00000509534 PARD3Q8TEW0 1356 aa23■■□□□ 1.27
SIL1-213ENST00000509534 USP6P35125 1406 aa22.99■■□□□ 1.27
SIL1-213ENST00000509534 NRKQ7Z2Y5 1582 aa22.99■■□□□ 1.27
SIL1-213ENST00000509534 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.99■■□□□ 1.278e-7■■■■□ 23.2
SIL1-213ENST00000509534 ORAI2Q96SN7 254 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms