RNA–Protein interactions for RNA: ENST00000509165.1

NFKB1-208, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 5

Gene NFKB1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-208ENST00000509165 TBC1D2Q9BYX2 928 aa9.58□□□□□ -0.88
NFKB1-208ENST00000509165 MOXD2PA6NHM9 499 aa9.57□□□□□ -0.88
NFKB1-208ENST00000509165 BRPF1P55201 1214 aaPredicted RBP9.57□□□□□ -0.88
NFKB1-208ENST00000509165 RNF19BQ6ZMZ0 732 aa9.57□□□□□ -0.88
NFKB1-208ENST00000509165 SPSB2Q99619 263 aa9.56□□□□□ -0.88
NFKB1-208ENST00000509165 FAM117AQ9C073 453 aa9.56□□□□□ -0.88
NFKB1-208ENST00000509165 PCDHGC3Q9UN70 934 aa9.56□□□□□ -0.88
NFKB1-208ENST00000509165 FMNL1O95466 1100 aaPredicted RBP9.55□□□□□ -0.88
NFKB1-208ENST00000509165 NDUFV2P19404 249 aa9.55□□□□□ -0.88
NFKB1-208ENST00000509165 DIXDC1Q155Q3 683 aa9.55□□□□□ -0.88
NFKB1-208ENST00000509165 FDX1P10109 184 aa9.54□□□□□ -0.88
NFKB1-208ENST00000509165 FAM160A2Q8N612 972 aaPredicted RBP9.54□□□□□ -0.88
NFKB1-208ENST00000509165 PLEKHG3A1L390 1219 aa9.53□□□□□ -0.88
NFKB1-208ENST00000509165 DGAT1O75907 488 aa9.53□□□□□ -0.88
NFKB1-208ENST00000509165 GJA5P36382 358 aa9.53□□□□□ -0.88
NFKB1-208ENST00000509165 GGCXP38435 758 aa9.53□□□□□ -0.88
NFKB1-208ENST00000509165 NEUROD2Q15784 382 aa9.53□□□□□ -0.88
NFKB1-208ENST00000509165 Q3C1V9 767 aa9.53□□□□□ -0.88
NFKB1-208ENST00000509165 MYSM1Q5VVJ2 828 aa9.53□□□□□ -0.88
NFKB1-208ENST00000509165 RSBN1LQ6PCB5 846 aaPredicted RBP9.53□□□□□ -0.88
NFKB1-208ENST00000509165 SPTLC1O15269 473 aa9.52□□□□□ -0.89
NFKB1-208ENST00000509165 S1PR4O95977 384 aa9.52□□□□□ -0.89
NFKB1-208ENST00000509165 MSS51Q4VC12 460 aa9.51□□□□□ -0.89
NFKB1-208ENST00000509165 SYMPKQ92797 1274 aaKnown RBP9.51□□□□□ -0.89
NFKB1-208ENST00000509165 SLC6A16Q9GZN6 736 aa9.51□□□□□ -0.89
NFKB1-208ENST00000509165 RNF223E7ERA6 249 aa9.5□□□□□ -0.89
NFKB1-208ENST00000509165 RIC3Q7Z5B4 369 aa9.5□□□□□ -0.89
NFKB1-208ENST00000509165 DDRGK1Q96HY6 314 aa9.5□□□□□ -0.89
NFKB1-208ENST00000509165 LIMD1Q9UGP4 676 aa9.5□□□□□ -0.89
NFKB1-208ENST00000509165 PCDHB15Q9Y5E8 787 aa9.5□□□□□ -0.89
NFKB1-208ENST00000509165 SLC19A1P41440 591 aa9.49□□□□□ -0.89
NFKB1-208ENST00000509165 EMID1Q96A84 441 aaPredicted RBP9.49□□□□□ -0.89
NFKB1-208ENST00000509165 USB1Q9BQ65 265 aaKnown RBP9.49□□□□□ -0.89
NFKB1-208ENST00000509165 PRDM9Q9NQV7 894 aa9.49□□□□□ -0.89
NFKB1-208ENST00000509165 TUSC1Q2TAM9 212 aa9.48□□□□□ -0.89
NFKB1-208ENST00000509165 FAM187AA6NFU0 413 aa9.47□□□□□ -0.89
NFKB1-208ENST00000509165 PPEF1O14829 653 aaPredicted RBP9.47□□□□□ -0.89
NFKB1-208ENST00000509165 RSPH6AQ9H0K4 717 aa9.47□□□□□ -0.89
NFKB1-208ENST00000509165 ST8SIA5O15466 376 aa9.46□□□□□ -0.9
NFKB1-208ENST00000509165 MMP16P51512 607 aa9.46□□□□□ -0.9
NFKB1-208ENST00000509165 SH3D19Q5HYK7 790 aa9.46□□□□□ -0.9
NFKB1-208ENST00000509165 RETREG3Q86VR2 466 aa9.46□□□□□ -0.9
NFKB1-208ENST00000509165 ANKLE1Q8NAG6 615 aa9.46□□□□□ -0.9
NFKB1-208ENST00000509165 DXOO77932 396 aaKnown RBP9.45□□□□□ -0.9
NFKB1-208ENST00000509165 STK17AQ9UEE5 414 aa9.45□□□□□ -0.9
NFKB1-208ENST00000509165 C6orf229H3BNL8 230 aa9.44□□□□□ -0.9
NFKB1-208ENST00000509165 HRCP23327 699 aa9.44□□□□□ -0.9
NFKB1-208ENST00000509165 CLK2P49760 499 aaKnown RBP9.44□□□□□ -0.9
NFKB1-208ENST00000509165 MTMR2Q13614 643 aa9.44□□□□□ -0.9
NFKB1-208ENST00000509165 SKIV2LQ15477 1246 aaKnown RBP9.44□□□□□ -0.9
NFKB1-208ENST00000509165 PLA2G2CQ5R387 149 aa9.44□□□□□ -0.9
NFKB1-208ENST00000509165 PRPF38BQ5VTL8 546 aaKnown RBP9.44□□□□□ -0.9
NFKB1-208ENST00000509165 SPRYD7Q5W111 196 aa9.44□□□□□ -0.9
NFKB1-208ENST00000509165 POLR3EQ9NVU0 708 aa9.44□□□□□ -0.9
NFKB1-208ENST00000509165 LOC100996750A0A140TA64 210 aa9.43□□□□□ -0.9
NFKB1-208ENST00000509165 LILRB3O75022 631 aa9.43□□□□□ -0.9
NFKB1-208ENST00000509165 PRR20EP86478 221 aa9.43□□□□□ -0.9
NFKB1-208ENST00000509165 PRR20CP86479 221 aa9.43□□□□□ -0.9
NFKB1-208ENST00000509165 PRR20DP86480 221 aa9.43□□□□□ -0.9
NFKB1-208ENST00000509165 PRR20BP86481 221 aa9.43□□□□□ -0.9
NFKB1-208ENST00000509165 PRR20AP86496 221 aa9.43□□□□□ -0.9
NFKB1-208ENST00000509165 KRTAP4-6Q9BYQ5 205 aa9.43□□□□□ -0.9
NFKB1-208ENST00000509165 SPDYE5A6NIY4 337 aa9.42□□□□□ -0.9
NFKB1-208ENST00000509165 TNFRSF10AO00220 468 aa9.42□□□□□ -0.9
NFKB1-208ENST00000509165 WFS1O76024 890 aa9.42□□□□□ -0.9
NFKB1-208ENST00000509165 QPCTQ16769 361 aa9.42□□□□□ -0.9
NFKB1-208ENST00000509165 ZNF598Q86UK7 904 aaKnown RBP9.42□□□□□ -0.9
NFKB1-208ENST00000509165 IL27Q8NEV9 243 aa9.42□□□□□ -0.9
NFKB1-208ENST00000509165 CABLES1Q8TDN4 633 aa9.42□□□□□ -0.9
NFKB1-208ENST00000509165 AAASQ9NRG9 546 aa9.42□□□□□ -0.9
NFKB1-208ENST00000509165 JUNDP17535 347 aa9.41□□□□□ -0.9
NFKB1-208ENST00000509165 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.41□□□□□ -0.9
NFKB1-208ENST00000509165 ZBTB3Q9H5J0 574 aa9.41□□□□□ -0.9
NFKB1-208ENST00000509165 FCF1Q9Y324 198 aaKnown RBP9.41□□□□□ -0.9
NFKB1-208ENST00000509165 CSPP1Q1MSJ5 1256 aa9.4□□□□□ -0.9
NFKB1-208ENST00000509165 FBXO31Q5XUX0 539 aaPredicted RBP9.4□□□□□ -0.9
NFKB1-208ENST00000509165 PROCA1Q8NCQ7 364 aaPredicted RBP9.4□□□□□ -0.9
NFKB1-208ENST00000509165 PRR7Q8TB68 274 aa9.4□□□□□ -0.9
NFKB1-208ENST00000509165 GOPCQ9HD26 462 aa9.4□□□□□ -0.9
NFKB1-208ENST00000509165 CFAP99D6REC4 459 aa9.39□□□□□ -0.91
NFKB1-208ENST00000509165 LIAT1Q6ZQX7 453 aa9.39□□□□□ -0.91
NFKB1-208ENST00000509165 GDF9O60383 454 aa9.38□□□□□ -0.91
NFKB1-208ENST00000509165 RTL5Q5HYW3 569 aaPredicted RBP9.38□□□□□ -0.91
NFKB1-208ENST00000509165 ZNF697Q5TEC3 545 aa9.38□□□□□ -0.91
NFKB1-208ENST00000509165 DESI1Q6ICB0 168 aa9.38□□□□□ -0.91
NFKB1-208ENST00000509165 DACH1Q9UI36 760 aa9.36□□□□□ -0.91
NFKB1-208ENST00000509165 PPP2R2DQ66LE6 453 aa9.35□□□□□ -0.91
NFKB1-208ENST00000509165 WIPF1O43516 503 aa9.34□□□□□ -0.91
NFKB1-208ENST00000509165 INSM1Q01101 510 aaPredicted RBP9.34□□□□□ -0.91
NFKB1-208ENST00000509165 NFX1Q12986 1120 aaKnown RBP9.34□□□□□ -0.91
NFKB1-208ENST00000509165 PTPRNQ16849 979 aa9.34□□□□□ -0.91
NFKB1-208ENST00000509165 LYPD8Q6UX82 237 aa9.34□□□□□ -0.91
NFKB1-208ENST00000509165 NUTM2BA6NNL0 878 aaPredicted RBP9.33□□□□□ -0.92
NFKB1-208ENST00000509165 NUTM2EB1AL46 878 aaPredicted RBP9.33□□□□□ -0.92
NFKB1-208ENST00000509165 RPIAP49247 311 aa9.33□□□□□ -0.92
NFKB1-208ENST00000509165 NUTM2DQ5VT03 806 aaPredicted RBP9.33□□□□□ -0.92
NFKB1-208ENST00000509165 NUTM2AQ8IVF1 878 aaPredicted RBP9.33□□□□□ -0.92
NFKB1-208ENST00000509165 NUDT12Q9BQG2 462 aa9.33□□□□□ -0.92
NFKB1-208ENST00000509165 GMPR2Q9P2T1 348 aaKnown RBP9.32□□□□□ -0.92
NFKB1-208ENST00000509165 PER1O15534 1290 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms