RNA–Protein interactions for RNA: ENST00000509109.5

CCSER1-208, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 1,070 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-208ENST00000509109 STAC3Q96MF2 364 aa12.02□□□□□ -0.49
CCSER1-208ENST00000509109 RIMS1Q86UR5 1692 aaKnown RBP12.02□□□□□ -0.49
CCSER1-208ENST00000509109 CDC42BPBQ9Y5S2 1711 aa12.01□□□□□ -0.49
CCSER1-208ENST00000509109 PPP1R3GB7ZBB8 358 aa12.01□□□□□ -0.49
CCSER1-208ENST00000509109 C6orf132Q5T0Z8 1188 aa12.01□□□□□ -0.49
CCSER1-208ENST00000509109 KDM5CP41229 1560 aa12.01□□□□□ -0.49
CCSER1-208ENST00000509109 FER1L4A9Z1Z3 1794 aa12□□□□□ -0.49
CCSER1-208ENST00000509109 PROX2Q3B8N5 592 aa12□□□□□ -0.49
CCSER1-208ENST00000509109 YEATS2Q9ULM3 1422 aa12□□□□□ -0.49
CCSER1-208ENST00000509109 MAP3K7O43318 606 aa11.99□□□□□ -0.49
CCSER1-208ENST00000509109 TSR1Q2NL82 804 aaKnown RBP11.99□□□□□ -0.49
CCSER1-208ENST00000509109 SLC4A5Q9BY07 1137 aa11.99□□□□□ -0.49
CCSER1-208ENST00000509109 C9orf84Q5VXU9 1444 aa11.99□□□□□ -0.49
CCSER1-208ENST00000509109 CDC42BPAQ5VT25 1732 aa11.98□□□□□ -0.49
CCSER1-208ENST00000509109 ABCC1P33527 1531 aa11.98□□□□□ -0.49
CCSER1-208ENST00000509109 ITSN2Q9NZM3 1697 aa11.97□□□□□ -0.49
CCSER1-208ENST00000509109 ATP10AO60312 1499 aa11.97□□□□□ -0.49
CCSER1-208ENST00000509109 PRIM1P49642 420 aaKnown RBP11.97□□□□□ -0.49
CCSER1-208ENST00000509109 EN1Q05925 392 aaPredicted RBP11.97□□□□□ -0.49
CCSER1-208ENST00000509109 SIGLEC1Q9BZZ2 1709 aa11.97□□□□□ -0.49
CCSER1-208ENST00000509109 REREQ9P2R6 1566 aa11.96□□□□□ -0.49
CCSER1-208ENST00000509109 ARHGEF1Q92888 912 aaKnown RBP11.96□□□□□ -0.49
CCSER1-208ENST00000509109 KCTD12Q96CX2 325 aaKnown RBP11.95□□□□□ -0.5
CCSER1-208ENST00000509109 DIP2CQ9Y2E4 1556 aa11.94□□□□□ -0.5
CCSER1-208ENST00000509109 BHMG1C9JSJ3 638 aaPredicted RBP11.94□□□□□ -0.5
CCSER1-208ENST00000509109 ARHGEF12Q9NZN5 1544 aa11.94□□□□□ -0.5
CCSER1-208ENST00000509109 MLH3Q9UHC1 1453 aa11.94□□□□□ -0.5
CCSER1-208ENST00000509109 ABCA6Q8N139 1617 aa11.93□□□□□ -0.5
CCSER1-208ENST00000509109 LMTK3Q96Q04 1460 aa11.93□□□□□ -0.5
CCSER1-208ENST00000509109 OSBPP22059 807 aa11.92□□□□□ -0.5
CCSER1-208ENST00000509109 MLLT3P42568 568 aaPredicted RBP11.92□□□□□ -0.5
CCSER1-208ENST00000509109 MRPL50Q8N5N7 158 aaKnown RBP11.92□□□□□ -0.5
CCSER1-208ENST00000509109 EHBP1L1Q8N3D4 1523 aa11.91□□□□□ -0.5
CCSER1-208ENST00000509109 PLEKHH2Q8IVE3 1493 aa11.91□□□□□ -0.5
CCSER1-208ENST00000509109 PREX1Q8TCU6 1659 aa11.91□□□□□ -0.5
CCSER1-208ENST00000509109 CEP162Q5TB80 1403 aa11.9□□□□□ -0.5
CCSER1-208ENST00000509109 SAMD9LQ8IVG5 1584 aa11.9□□□□□ -0.5
CCSER1-208ENST00000509109 KIAA1468Q9P260 1216 aa11.9□□□□□ -0.5
CCSER1-208ENST00000509109 SYCP2Q9BX26 1530 aa11.9□□□□□ -0.5
CCSER1-208ENST00000509109 MTUS2Q5JR59 1369 aa11.9□□□□□ -0.5
CCSER1-208ENST00000509109 GOLGA8CPA6NN73 597 aa11.89□□□□□ -0.51
CCSER1-208ENST00000509109 MLECQ14165 292 aa11.89□□□□□ -0.51
CCSER1-208ENST00000509109 AFAP1Q8N556 730 aa11.89□□□□□ -0.51
CCSER1-208ENST00000509109 NBPF3Q9H094 633 aa11.89□□□□□ -0.51
CCSER1-208ENST00000509109 CDHR5Q9HBB8 845 aa11.89□□□□□ -0.51
CCSER1-208ENST00000509109 RABGEF1Q9UJ41 708 aa11.89□□□□□ -0.51
CCSER1-208ENST00000509109 AGLP35573 1532 aa11.89□□□□□ -0.51
CCSER1-208ENST00000509109 KIDINS220Q9ULH0 1771 aa11.89□□□□□ -0.51
CCSER1-208ENST00000509109 GPATCH8Q9UKJ3 1502 aaKnown RBP11.88□□□□□ -0.51
CCSER1-208ENST00000509109 KDM2AQ9Y2K7 1162 aa11.88□□□□□ -0.51
CCSER1-208ENST00000509109 CCNB3Q8WWL7 1395 aa11.88□□□□□ -0.51
CCSER1-208ENST00000509109 TRAPPC8Q9Y2L5 1435 aa11.87□□□□□ -0.51
CCSER1-208ENST00000509109 KIAA1107Q9UPP5 1409 aa11.86□□□□□ -0.51
CCSER1-208ENST00000509109 TRIM6-TRIM34B2RNG4 842 aa11.86□□□□□ -0.51
CCSER1-208ENST00000509109 SEPT9Q9UHD8 586 aaPredicted RBP11.86□□□□□ -0.51
CCSER1-208ENST00000509109 INO80Q9ULG1 1556 aaPredicted RBP11.86□□□□□ -0.51
CCSER1-208ENST00000509109 ATP7AQ04656 1500 aa11.86□□□□□ -0.51
CCSER1-208ENST00000509109 TIAM1Q13009 1591 aa11.85□□□□□ -0.51
CCSER1-208ENST00000509109 PTPN5P54829 565 aa11.85□□□□□ -0.51
CCSER1-208ENST00000509109 WNT2BQ93097 391 aa11.85□□□□□ -0.51
CCSER1-208ENST00000509109 HCSTQ9UBK5 93 aa11.85□□□□□ -0.51
CCSER1-208ENST00000509109 SUPT6HQ7KZ85 1726 aaKnown RBP11.85□□□□□ -0.51
CCSER1-208ENST00000509109 SEMA3EO15041 775 aa11.84□□□□□ -0.51
CCSER1-208ENST00000509109 ESF1Q9H501 851 aaKnown RBP11.84□□□□□ -0.51
CCSER1-208ENST00000509109 CFDP1Q9UEE9 299 aaPredicted RBP11.84□□□□□ -0.51
CCSER1-208ENST00000509109 TSKSQ9UJT2 592 aa11.84□□□□□ -0.51
CCSER1-208ENST00000509109 ZNF777Q9ULD5 760 aaPredicted RBP11.84□□□□□ -0.51
CCSER1-208ENST00000509109 CNTLNQ9NXG0 1405 aa11.84□□□□□ -0.51
CCSER1-208ENST00000509109 C3P01024 1663 aa11.84□□□□□ -0.51
CCSER1-208ENST00000509109 MROH2AA6NES4 1674 aa11.83□□□□□ -0.52
CCSER1-208ENST00000509109 ADGBQ8N7X0 1667 aa11.83□□□□□ -0.52
CCSER1-208ENST00000509109 SPAG9O60271 1321 aaKnown RBP11.83□□□□□ -0.52
CCSER1-208ENST00000509109 SETD1BQ9UPS6 1966 aaKnown RBP11.82□□□□□ -0.52
CCSER1-208ENST00000509109 CDCA7LQ96GN5 454 aa11.82□□□□□ -0.52
CCSER1-208ENST00000509109 UHRF1BP1Q6BDS2 1440 aa11.82□□□□□ -0.52
CCSER1-208ENST00000509109 PLXNC1O60486 1568 aa11.82□□□□□ -0.52
CCSER1-208ENST00000509109 ONECUT3O60422 494 aaPredicted RBP11.81□□□□□ -0.52
CCSER1-208ENST00000509109 PRSS12P56730 875 aa11.8□□□□□ -0.52
CCSER1-208ENST00000509109 THSD4Q6ZMP0 1018 aa11.8□□□□□ -0.52
CCSER1-208ENST00000509109 FAM198AQ9UFP1 575 aa11.8□□□□□ -0.52
CCSER1-208ENST00000509109 PACS2Q86VP3 889 aa11.79□□□□□ -0.52
CCSER1-208ENST00000509109 VPS8Q8N3P4 1428 aa11.78□□□□□ -0.52
CCSER1-208ENST00000509109 A2MP01023 1474 aa11.78□□□□□ -0.52
CCSER1-208ENST00000509109 NCOA2Q15596 1464 aa11.78□□□□□ -0.52
CCSER1-208ENST00000509109 SMAPO00193 183 aa11.78□□□□□ -0.52
CCSER1-208ENST00000509109 CERKQ8TCT0 537 aa11.78□□□□□ -0.52
CCSER1-208ENST00000509109 HNRNPMP52272 730 aaKnown RBP eCLIP11.77□□□□□ -0.53
CCSER1-208ENST00000509109 HSPA2P54652 639 aa11.77□□□□□ -0.53
CCSER1-208ENST00000509109 ZFRQ96KR1 1074 aaKnown RBP11.77□□□□□ -0.53
CCSER1-208ENST00000509109 CAMSAP2Q08AD1 1489 aa11.76□□□□□ -0.53
CCSER1-208ENST00000509109 CCDC141Q6ZP82 1450 aa11.76□□□□□ -0.53
CCSER1-208ENST00000509109 CLTCQ00610 1675 aaKnown RBP11.76□□□□□ -0.53
CCSER1-208ENST00000509109 C3orf80F5H4A9 247 aa11.76□□□□□ -0.53
CCSER1-208ENST00000509109 BCAMP50895 628 aa11.76□□□□□ -0.53
CCSER1-208ENST00000509109 LAPTM4BQ86VI4 370 aa11.76□□□□□ -0.53
CCSER1-208ENST00000509109 ANKK1Q8NFD2 765 aa11.76□□□□□ -0.53
CCSER1-208ENST00000509109 NPDC1Q9NQX5 325 aaPredicted RBP11.76□□□□□ -0.53
CCSER1-208ENST00000509109 NPATQ14207 1427 aa11.76□□□□□ -0.53
CCSER1-208ENST00000509109 MAP3K1Q13233 1512 aa11.76□□□□□ -0.53
CCSER1-208ENST00000509109 CEBPAP49715 358 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms