RNA–Protein interactions for RNA: ENST00000508952.5

PACRGL-220, Transcript of parkin coregulated like, humanhuman

TSL 1 (best)

Gene PACRGL, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-220ENST00000508952 YTHDC2Q9H6S0 1430 aaKnown RBP32.49■■■□□ 2.79
PACRGL-220ENST00000508952 LAMC1P11047 1609 aa32.48■■■□□ 2.79
PACRGL-220ENST00000508952 PLEKHH1Q9ULM0 1364 aa32.47■■■□□ 2.79
PACRGL-220ENST00000508952 C14orf93Q9H972 538 aaKnown RBP32.47■■■□□ 2.79
PACRGL-220ENST00000508952 MEX3CQ5U5Q3 659 aaKnown RBP32.46■■■□□ 2.79
PACRGL-220ENST00000508952 CFAP70Q5T0N1 1121 aa32.45■■■□□ 2.79
PACRGL-220ENST00000508952 NUTM2BA6NNL0 878 aaPredicted RBP32.44■■■□□ 2.78
PACRGL-220ENST00000508952 NUTM2EB1AL46 878 aaPredicted RBP32.44■■■□□ 2.78
PACRGL-220ENST00000508952 NUTM2AQ8IVF1 878 aaPredicted RBP32.44■■■□□ 2.78
PACRGL-220ENST00000508952 LRRC59Q96AG4 307 aaKnown RBP32.44■■■□□ 2.78
PACRGL-220ENST00000508952 PNPLA6Q8IY17 1366 aa32.4■■■□□ 2.78
PACRGL-220ENST00000508952 DHX57Q6P158 1386 aaKnown RBP32.38■■■□□ 2.77
PACRGL-220ENST00000508952 NUTM2FA1L443 756 aa32.37■■■□□ 2.77
PACRGL-220ENST00000508952 ESCO1Q5FWF5 840 aa32.36■■■□□ 2.77
PACRGL-220ENST00000508952 FMN2Q9NZ56 1722 aa32.36■■■□□ 2.77
PACRGL-220ENST00000508952 SOS2Q07890 1332 aaPredicted RBP32.35■■■□□ 2.77
PACRGL-220ENST00000508952 KDM2AQ9Y2K7 1162 aa32.35■■■□□ 2.77
PACRGL-220ENST00000508952 DCAF11Q8TEB1 546 aa32.34■■■□□ 2.77
PACRGL-220ENST00000508952 SIRT1Q96EB6 747 aa32.32■■■□□ 2.76
PACRGL-220ENST00000508952 ADGRB1O14514 1584 aa32.31■■■□□ 2.76
PACRGL-220ENST00000508952 SAFB2Q14151 953 aaKnown RBP eCLIP32.29■■■□□ 2.76
PACRGL-220ENST00000508952 ZNF772Q68DY9 489 aaPredicted RBP32.29■■■□□ 2.76
PACRGL-220ENST00000508952 PRAM1Q96QH2 718 aa32.28■■■□□ 2.76
PACRGL-220ENST00000508952 NPHP3Q7Z494 1330 aa32.27■■■□□ 2.76
PACRGL-220ENST00000508952 DLC1Q96QB1 1528 aa32.27■■■□□ 2.76
PACRGL-220ENST00000508952 FOXO3O43524 673 aa32.26■■■□□ 2.75
PACRGL-220ENST00000508952 PXDNQ92626 1479 aa32.26■■■□□ 2.75
PACRGL-220ENST00000508952 RGPD8O14715 1765 aaPredicted RBP32.25■■■□□ 2.75
PACRGL-220ENST00000508952 XPCQ01831 940 aaPredicted RBP32.25■■■□□ 2.75
PACRGL-220ENST00000508952 AFF2P51816 1311 aa32.25■■■□□ 2.75
PACRGL-220ENST00000508952 C8orf37Q96NL8 207 aa32.23■■■□□ 2.75
PACRGL-220ENST00000508952 KIF1AQ12756 1690 aa32.22■■■□□ 2.75
PACRGL-220ENST00000508952 POGKQ9P215 609 aa32.22■■■□□ 2.75
PACRGL-220ENST00000508952 COL22A1Q8NFW1 1626 aaPredicted RBP32.22■■■□□ 2.75
PACRGL-220ENST00000508952 ADAMTS2O95450 1211 aa32.21■■■□□ 2.75
PACRGL-220ENST00000508952 TRAK1Q9UPV9 953 aa32.21■■■□□ 2.75
PACRGL-220ENST00000508952 STAC3Q96MF2 364 aa32.2■■■□□ 2.75
PACRGL-220ENST00000508952 ADGRB2O60241 1585 aa32.16■■■□□ 2.74
PACRGL-220ENST00000508952 USP32Q8NFA0 1604 aa32.14■■■□□ 2.74
PACRGL-220ENST00000508952 NGLY1Q96IV0 654 aa32.13■■■□□ 2.73
PACRGL-220ENST00000508952 RXRBP28702 533 aa32.12■■■□□ 2.73
PACRGL-220ENST00000508952 HIRIP3Q9BW71 556 aaPredicted RBP32.12■■■□□ 2.73
PACRGL-220ENST00000508952 PHF8Q9UPP1 1060 aa32.12■■■□□ 2.73
PACRGL-220ENST00000508952 MINK1Q8N4C8 1332 aaPredicted RBP32.11■■■□□ 2.73
PACRGL-220ENST00000508952 ARHGEF28Q8N1W1 1705 aaKnown RBP32.11■■■□□ 2.73
PACRGL-220ENST00000508952 KRT28Q7Z3Y7 464 aa32.08■■■□□ 2.73
PACRGL-220ENST00000508952 MARF1Q9Y4F3 1742 aaKnown RBP32.07■■■□□ 2.72
PACRGL-220ENST00000508952 QTRT2Q9H974 415 aaKnown RBP32.07■■■□□ 2.72
PACRGL-220ENST00000508952 ANKARQ7Z5J8 1434 aa32.07■■■□□ 2.72
PACRGL-220ENST00000508952 SPATA31A3Q5VYP0 1347 aa32.06■■■□□ 2.72
PACRGL-220ENST00000508952 KIAA1210Q9ULL0 1709 aa32.06■■■□□ 2.72
PACRGL-220ENST00000508952 CDK12Q9NYV4 1490 aaPredicted RBP32.03■■■□□ 2.72
PACRGL-220ENST00000508952 PMFBP1Q8TBY8 1022 aa32.02■■■□□ 2.72
PACRGL-220ENST00000508952 USP21Q9UK80 565 aa32.02■■■□□ 2.72
PACRGL-220ENST00000508952 TULP4Q9NRJ4 1543 aa32.01■■■□□ 2.72
PACRGL-220ENST00000508952 PRR36Q9H6K5 1346 aa32■■■□□ 2.71
PACRGL-220ENST00000508952 TNS3Q68CZ2 1445 aa32■■■□□ 2.71
PACRGL-220ENST00000508952 WASLO00401 505 aaPredicted RBP31.99■■■□□ 2.71
PACRGL-220ENST00000508952 RBM6P78332 1123 aaKnown RBP31.99■■■□□ 2.71
PACRGL-220ENST00000508952 FNBP4Q8N3X1 1017 aaPredicted RBP31.99■■■□□ 2.71
PACRGL-220ENST00000508952 EIF3AQ14152 1382 aaKnown RBP31.98■■■□□ 2.71
PACRGL-220ENST00000508952 PSME1Q06323 249 aa31.98■■■□□ 2.71
PACRGL-220ENST00000508952 RGS12O14924 1447 aa31.97■■■□□ 2.71
PACRGL-220ENST00000508952 NBPF1Q3BBV0 1214 aa31.96■■■□□ 2.71
PACRGL-220ENST00000508952 SBNO1A3KN83 1393 aa31.95■■■□□ 2.71
PACRGL-220ENST00000508952 SIN3AQ96ST3 1273 aa31.95■■■□□ 2.71
PACRGL-220ENST00000508952 PLEKHG5O94827 1062 aa31.94■■■□□ 2.7
PACRGL-220ENST00000508952 TRPM3Q9HCF6 1732 aaPredicted RBP31.93■■■□□ 2.7
PACRGL-220ENST00000508952 LMOD2Q6P5Q4 547 aa31.93■■■□□ 2.7
PACRGL-220ENST00000508952 TRPC5Q9UL62 973 aaPredicted RBP31.93■■■□□ 2.7
PACRGL-220ENST00000508952 ABCA3Q99758 1704 aa31.92■■■□□ 2.7
PACRGL-220ENST00000508952 ATRNO75882 1429 aa31.92■■■□□ 2.7
PACRGL-220ENST00000508952 BCL9LQ86UU0 1499 aa31.91■■■□□ 2.7
PACRGL-220ENST00000508952 CABLES1Q8TDN4 633 aa31.91■■■□□ 2.7
PACRGL-220ENST00000508952 L3MBTL2Q969R5 705 aa31.91■■■□□ 2.7
PACRGL-220ENST00000508952 ITSN1Q15811 1721 aa31.9■■■□□ 2.7
PACRGL-220ENST00000508952 ATP7BP35670 1465 aa31.9■■■□□ 2.7
PACRGL-220ENST00000508952 ARHGEF10O15013 1369 aa31.89■■■□□ 2.7
PACRGL-220ENST00000508952 UPF1Q92900 1129 aaKnown RBP eCLIP31.88■■■□□ 2.69
PACRGL-220ENST00000508952 GPRASP1Q5JY77 1395 aa31.87■■■□□ 2.69
PACRGL-220ENST00000508952 HAP1P54257 671 aaPredicted RBP31.87■■■□□ 2.69
PACRGL-220ENST00000508952 NEUROD1Q13562 356 aa31.87■■■□□ 2.69
PACRGL-220ENST00000508952 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.86■■■□□ 2.69
PACRGL-220ENST00000508952 ALS2Q96Q42 1657 aa31.86■■■□□ 2.69
PACRGL-220ENST00000508952 NUDT16Q96DE0 195 aaKnown RBP31.85■■■□□ 2.69
PACRGL-220ENST00000508952 NGDNQ8NEJ9 315 aaKnown RBP31.84■■■□□ 2.69
PACRGL-220ENST00000508952 CDK19Q9BWU1 502 aa31.84■■■□□ 2.69
PACRGL-220ENST00000508952 SLIT2O94813 1529 aa31.84■■■□□ 2.69
PACRGL-220ENST00000508952 TOPAZ1Q8N9V7 1692 aa31.82■■■□□ 2.68
PACRGL-220ENST00000508952 PLCH1Q4KWH8 1693 aa31.81■■■□□ 2.68
PACRGL-220ENST00000508952 TRPM1Q7Z4N2 1603 aa31.81■■■□□ 2.68
PACRGL-220ENST00000508952 QRICH2Q9H0J4 1663 aa31.79■■■□□ 2.68
PACRGL-220ENST00000508952 UNC5CLQ8IV45 518 aa31.78■■■□□ 2.68
PACRGL-220ENST00000508952 CENPJQ9HC77 1338 aaPredicted RBP31.77■■■□□ 2.68
PACRGL-220ENST00000508952 PAK3O75914 559 aaPredicted RBP31.76■■■□□ 2.67
PACRGL-220ENST00000508952 GJD4Q96KN9 370 aaPredicted RBP31.76■■■□□ 2.67
PACRGL-220ENST00000508952 NWD2Q9ULI1 1742 aa31.75■■■□□ 2.67
PACRGL-220ENST00000508952 GLI3P10071 1580 aa31.74■■■□□ 2.67
PACRGL-220ENST00000508952 CRYBG1Q9Y4K1 1723 aa31.74■■■□□ 2.67
PACRGL-220ENST00000508952 RALGAPBQ86X10 1494 aa31.72■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms