RNA–Protein interactions for RNA: ENST00000508909.5

FRAS1-204, Transcript of Fraser extracellular matrix complex subunit 1, humanhuman

TSL 2

Gene FRAS1, Length 2,297 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRAS1-204ENST00000508909 SHPRHQ149N8 1683 aa20.7■□□□□ 0.9
FRAS1-204ENST00000508909 CLUAP1Q96AJ1 413 aa20.69■□□□□ 0.9
FRAS1-204ENST00000508909 RUNDC1Q96C34 613 aa20.69■□□□□ 0.9
FRAS1-204ENST00000508909 TCP11L2Q8N4U5 519 aa20.69■□□□□ 0.9
FRAS1-204ENST00000508909 ADGRB1O14514 1584 aa20.68■□□□□ 0.9
FRAS1-204ENST00000508909 USP19O94966 1318 aa20.68■□□□□ 0.9
FRAS1-204ENST00000508909 NPATQ14207 1427 aa20.68■□□□□ 0.9
FRAS1-204ENST00000508909 RARSP54136 660 aaKnown RBP20.67■□□□□ 0.9
FRAS1-204ENST00000508909 ZNF518AQ6AHZ1 1483 aa20.66■□□□□ 0.9
FRAS1-204ENST00000508909 MTHFSP49914 203 aa20.66■□□□□ 0.9
FRAS1-204ENST00000508909 DAXXQ9UER7 740 aaPredicted RBP20.65■□□□□ 0.9
FRAS1-204ENST00000508909 TNNQ9UQP3 1299 aa20.65■□□□□ 0.9
FRAS1-204ENST00000508909 IQSEC2Q5JU85 1478 aa20.65■□□□□ 0.9
FRAS1-204ENST00000508909 NINLQ9Y2I6 1382 aa20.65■□□□□ 0.9
FRAS1-204ENST00000508909 IL27Q8NEV9 243 aa20.65■□□□□ 0.9
FRAS1-204ENST00000508909 FRAT1Q92837 279 aaPredicted RBP20.65■□□□□ 0.9
FRAS1-204ENST00000508909 SEC24BO95487 1268 aa20.64■□□□□ 0.89
FRAS1-204ENST00000508909 GGT6Q6P531 493 aa20.64■□□□□ 0.89
FRAS1-204ENST00000508909 RLBP1P12271 317 aa20.64■□□□□ 0.89
FRAS1-204ENST00000508909 CFAP65Q6ZU64 1925 aaKnown RBP20.63■□□□□ 0.89
FRAS1-204ENST00000508909 ZC3H13Q5T200 1668 aaKnown RBP20.63■□□□□ 0.89
FRAS1-204ENST00000508909 CANXP27824 592 aaKnown RBP20.63■□□□□ 0.89
FRAS1-204ENST00000508909 WDR63Q8IWG1 891 aa20.62■□□□□ 0.89
FRAS1-204ENST00000508909 PPLO60437 1756 aa20.62■□□□□ 0.89
FRAS1-204ENST00000508909 QRICH2Q9H0J4 1663 aa20.62■□□□□ 0.89
FRAS1-204ENST00000508909 PCDHB15Q9Y5E8 787 aa20.62■□□□□ 0.89
FRAS1-204ENST00000508909 FRMPD1Q5SYB0 1578 aa20.61■□□□□ 0.89
FRAS1-204ENST00000508909 GSE1Q14687 1217 aa20.61■□□□□ 0.89
FRAS1-204ENST00000508909 RPGRIP1LQ68CZ1 1315 aa20.6■□□□□ 0.89
FRAS1-204ENST00000508909 CCDC27Q2M243 656 aa20.6■□□□□ 0.89
FRAS1-204ENST00000508909 NUTM2DQ5VT03 806 aaPredicted RBP20.59■□□□□ 0.89
FRAS1-204ENST00000508909 BCL2L13Q9BXK5 485 aa20.59■□□□□ 0.89
FRAS1-204ENST00000508909 MAPK8IP3Q9UPT6 1336 aa20.58■□□□□ 0.88
FRAS1-204ENST00000508909 FRAT2O75474 233 aaPredicted RBP20.57■□□□□ 0.88
FRAS1-204ENST00000508909 USP32Q8NFA0 1604 aa20.57■□□□□ 0.88
FRAS1-204ENST00000508909 PUS7Q96PZ0 661 aaKnown RBP20.56■□□□□ 0.88
FRAS1-204ENST00000508909 MLH3Q9UHC1 1453 aa20.56■□□□□ 0.88
FRAS1-204ENST00000508909 POGZQ7Z3K3 1410 aa20.55■□□□□ 0.88
FRAS1-204ENST00000508909 CFAP53Q96M91 514 aa20.55■□□□□ 0.88
FRAS1-204ENST00000508909 TULP4Q9NRJ4 1543 aa20.54■□□□□ 0.88
FRAS1-204ENST00000508909 CABP2Q9NPB3 220 aa20.54■□□□□ 0.88
FRAS1-204ENST00000508909 ANKRD36BQ8N2N9 1353 aa20.54■□□□□ 0.88
FRAS1-204ENST00000508909 EVC2Q86UK5 1308 aa20.54■□□□□ 0.88
FRAS1-204ENST00000508909 PMFBP1Q8TBY8 1022 aa20.53■□□□□ 0.88
FRAS1-204ENST00000508909 ABCC3O15438 1527 aa20.53■□□□□ 0.88
FRAS1-204ENST00000508909 VIRMAQ69YN4 1812 aaKnown RBP20.53■□□□□ 0.88
FRAS1-204ENST00000508909 AAMPQ13685 434 aa20.53■□□□□ 0.88
FRAS1-204ENST00000508909 NLRP1Q9C000 1473 aa20.53■□□□□ 0.88
FRAS1-204ENST00000508909 U2AF1L5P0DN76 240 aaPredicted RBP20.52■□□□□ 0.88
FRAS1-204ENST00000508909 U2AF1Q01081 240 aaKnown RBP eCLIP20.52■□□□□ 0.88
FRAS1-204ENST00000508909 NCBP3Q53F19 620 aaKnown RBP20.52■□□□□ 0.88
FRAS1-204ENST00000508909 CD109Q6YHK3 1445 aa20.52■□□□□ 0.88
FRAS1-204ENST00000508909 PDZRN3Q9UPQ7 1066 aa20.52■□□□□ 0.88
FRAS1-204ENST00000508909 GLI2P10070 1586 aa20.52■□□□□ 0.87
FRAS1-204ENST00000508909 HECW2Q9P2P5 1572 aa20.51■□□□□ 0.87
FRAS1-204ENST00000508909 VGFO15240 615 aaPredicted RBP20.5■□□□□ 0.87
FRAS1-204ENST00000508909 MYH16Q9H6N6 1097 aa20.5■□□□□ 0.87
FRAS1-204ENST00000508909 SIGLEC1Q9BZZ2 1709 aa20.5■□□□□ 0.87
FRAS1-204ENST00000508909 SAFB2Q14151 953 aaKnown RBP eCLIP20.49■□□□□ 0.87
FRAS1-204ENST00000508909 NSD2O96028 1365 aa20.49■□□□□ 0.87
FRAS1-204ENST00000508909 RTN4Q9NQC3 1192 aaKnown RBP20.48■□□□□ 0.87
FRAS1-204ENST00000508909 BRPF3Q9ULD4 1205 aa20.48■□□□□ 0.87
FRAS1-204ENST00000508909 PLEKHF1Q96S99 279 aa20.48■□□□□ 0.87
FRAS1-204ENST00000508909 NEXMIFQ5QGS0 1516 aa20.48■□□□□ 0.87
FRAS1-204ENST00000508909 ARHGEF28Q8N1W1 1705 aaKnown RBP20.48■□□□□ 0.87
FRAS1-204ENST00000508909 TSR2Q969E8 191 aaKnown RBP20.47■□□□□ 0.87
FRAS1-204ENST00000508909 MVPQ14764 893 aaKnown RBP20.47■□□□□ 0.87
FRAS1-204ENST00000508909 RAPGEF3O95398 923 aa20.46■□□□□ 0.87
FRAS1-204ENST00000508909 NPM1P06748 294 aaKnown RBP eCLIP20.46■□□□□ 0.87
FRAS1-204ENST00000508909 IDI1Q13907 227 aa20.46■□□□□ 0.87
FRAS1-204ENST00000508909 ADGRB2O60241 1585 aa20.46■□□□□ 0.87
FRAS1-204ENST00000508909 RWDD1Q9H446 243 aaPredicted RBP20.46■□□□□ 0.87
FRAS1-204ENST00000508909 PIK3C2BO00750 1634 aa20.45■□□□□ 0.86
FRAS1-204ENST00000508909 CAMSAP1Q5T5Y3 1602 aa20.45■□□□□ 0.86
FRAS1-204ENST00000508909 TRIM35Q9UPQ4 493 aa20.45■□□□□ 0.86
FRAS1-204ENST00000508909 A0A1W2PP64 1363 aa20.45■□□□□ 0.86
FRAS1-204ENST00000508909 SENP3Q9H4L4 574 aaPredicted RBP20.44■□□□□ 0.86
FRAS1-204ENST00000508909 ZKSCAN2Q63HK3 967 aa20.44■□□□□ 0.86
FRAS1-204ENST00000508909 GGNBP2Q9H3C7 697 aa20.44■□□□□ 0.86
FRAS1-204ENST00000508909 ZMYM3Q14202 1370 aa20.43■□□□□ 0.86
FRAS1-204ENST00000508909 ABCC11Q96J66 1382 aa20.43■□□□□ 0.86
FRAS1-204ENST00000508909 STK26Q9P289 416 aa20.43■□□□□ 0.86
FRAS1-204ENST00000508909 TMPOP42166 694 aaKnown RBP20.43■□□□□ 0.86
FRAS1-204ENST00000508909 EXOSC9Q06265 439 aaKnown RBP20.43■□□□□ 0.86
FRAS1-204ENST00000508909 DZIP1LQ8IYY4 767 aaKnown RBP20.43■□□□□ 0.86
FRAS1-204ENST00000508909 TBC1D32Q96NH3 1257 aa20.43■□□□□ 0.86
FRAS1-204ENST00000508909 U2SURPO15042 1029 aaKnown RBP20.41■□□□□ 0.86
FRAS1-204ENST00000508909 ANTXR1Q9H6X2 564 aa20.41■□□□□ 0.86
FRAS1-204ENST00000508909 FYB1O15117 783 aa20.41■□□□□ 0.86
FRAS1-204ENST00000508909 SSH1Q8WYL5 1049 aa20.41■□□□□ 0.86
FRAS1-204ENST00000508909 COL3A1P02461 1466 aaPredicted RBP20.4■□□□□ 0.86
FRAS1-204ENST00000508909 CT47B1P0C2W7 299 aaPredicted RBP20.4■□□□□ 0.86
FRAS1-204ENST00000508909 TRIM27P14373 513 aa20.4■□□□□ 0.86
FRAS1-204ENST00000508909 BECN1Q14457 450 aa20.4■□□□□ 0.86
FRAS1-204ENST00000508909 SRPK2P78362 688 aaKnown RBP20.39■□□□□ 0.86
FRAS1-204ENST00000508909 CFAP74Q9C0B2 1584 aa20.39■□□□□ 0.86
FRAS1-204ENST00000508909 SLKQ9H2G2 1235 aaPredicted RBP20.39■□□□□ 0.85
FRAS1-204ENST00000508909 ZFYVE9O95405 1425 aa20.38■□□□□ 0.85
FRAS1-204ENST00000508909 FTSJ3Q8IY81 847 aaKnown RBP20.38■□□□□ 0.85
FRAS1-204ENST00000508909 SMC4Q9NTJ3 1288 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms