RNA–Protein interactions for RNA: ENST00000508885.5

LINC00461-208, long intergenic non-protein coding RNA 461, humanhuman

TSL 4

Gene LINC00461, Length 558 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00461-208ENST00000508885 PTCH1Q13635 1447 aa12.45□□□□□ -0.42
LINC00461-208ENST00000508885 NALCNQ8IZF0 1738 aa12.45□□□□□ -0.42
LINC00461-208ENST00000508885 NUTM2FA1L443 756 aa12.45□□□□□ -0.42
LINC00461-208ENST00000508885 XPCQ01831 940 aaPredicted RBP12.45□□□□□ -0.42
LINC00461-208ENST00000508885 TRPC5Q9UL62 973 aaPredicted RBP12.45□□□□□ -0.42
LINC00461-208ENST00000508885 KIF1BO60333 1816 aa12.45□□□□□ -0.42
LINC00461-208ENST00000508885 FOXO3O43524 673 aa12.44□□□□□ -0.42
LINC00461-208ENST00000508885 HFM1A2PYH4 1435 aa12.44□□□□□ -0.42
LINC00461-208ENST00000508885 NPHP3Q7Z494 1330 aa12.43□□□□□ -0.42
LINC00461-208ENST00000508885 ADGRF5Q8IZF2 1346 aa12.43□□□□□ -0.42
LINC00461-208ENST00000508885 WAPLQ7Z5K2 1190 aa12.43□□□□□ -0.42
LINC00461-208ENST00000508885 FNBP4Q8N3X1 1017 aaPredicted RBP12.43□□□□□ -0.42
LINC00461-208ENST00000508885 TMEM132EQ6IEE7 984 aa12.41□□□□□ -0.42
LINC00461-208ENST00000508885 ATAD2Q6PL18 1390 aa12.41□□□□□ -0.42
LINC00461-208ENST00000508885 CCDC144AA2RUR9 1427 aa12.38□□□□□ -0.43
LINC00461-208ENST00000508885 MPHOSPH9Q99550 1183 aa12.38□□□□□ -0.43
LINC00461-208ENST00000508885 LRPPRCP42704 1394 aaKnown RBP12.38□□□□□ -0.43
LINC00461-208ENST00000508885 ATRNO75882 1429 aa12.37□□□□□ -0.43
LINC00461-208ENST00000508885 PRAG1Q86YV5 1406 aa12.37□□□□□ -0.43
LINC00461-208ENST00000508885 PLEKHG5O94827 1062 aa12.37□□□□□ -0.43
LINC00461-208ENST00000508885 CACNB1Q02641 598 aaPredicted RBP12.37□□□□□ -0.43
LINC00461-208ENST00000508885 GJD4Q96KN9 370 aaPredicted RBP12.37□□□□□ -0.43
LINC00461-208ENST00000508885 LAMC1P11047 1609 aa12.37□□□□□ -0.43
LINC00461-208ENST00000508885 ANKRD30BQ9BXX2 1392 aa12.36□□□□□ -0.43
LINC00461-208ENST00000508885 PLEKHH1Q9ULM0 1364 aa12.36□□□□□ -0.43
LINC00461-208ENST00000508885 HAP1P54257 671 aaPredicted RBP12.36□□□□□ -0.43
LINC00461-208ENST00000508885 ZRANB1Q9UGI0 708 aa12.36□□□□□ -0.43
LINC00461-208ENST00000508885 PPLO60437 1756 aa12.35□□□□□ -0.43
LINC00461-208ENST00000508885 MYOM2P54296 1465 aa12.35□□□□□ -0.43
LINC00461-208ENST00000508885 ABCC11Q96J66 1382 aa12.35□□□□□ -0.43
LINC00461-208ENST00000508885 KRT28Q7Z3Y7 464 aa12.35□□□□□ -0.43
LINC00461-208ENST00000508885 BCL9LQ86UU0 1499 aa12.34□□□□□ -0.43
LINC00461-208ENST00000508885 PXDNQ92626 1479 aa12.34□□□□□ -0.43
LINC00461-208ENST00000508885 UNC5CLQ8IV45 518 aa12.34□□□□□ -0.43
LINC00461-208ENST00000508885 CDC42BPGQ6DT37 1551 aa12.34□□□□□ -0.43
LINC00461-208ENST00000508885 SPATA31A3Q5VYP0 1347 aa12.34□□□□□ -0.43
LINC00461-208ENST00000508885 SAFB2Q14151 953 aaKnown RBP eCLIP12.33□□□□□ -0.44
LINC00461-208ENST00000508885 LMOD2Q6P5Q4 547 aa12.33□□□□□ -0.44
LINC00461-208ENST00000508885 CCDC125Q86Z20 511 aa12.33□□□□□ -0.44
LINC00461-208ENST00000508885 SPATA31E1Q6ZUB1 1445 aa12.32□□□□□ -0.44
LINC00461-208ENST00000508885 PSME1Q06323 249 aa12.32□□□□□ -0.44
LINC00461-208ENST00000508885 CABLES1Q8TDN4 633 aa12.32□□□□□ -0.44
LINC00461-208ENST00000508885 PHF8Q9UPP1 1060 aa12.32□□□□□ -0.44
LINC00461-208ENST00000508885 CCDC9Q9Y3X0 531 aaKnown RBP12.32□□□□□ -0.44
LINC00461-208ENST00000508885 COL22A1Q8NFW1 1626 aaPredicted RBP12.32□□□□□ -0.44
LINC00461-208ENST00000508885 TECPR2O15040 1411 aa12.31□□□□□ -0.44
LINC00461-208ENST00000508885 YTHDC2Q9H6S0 1430 aaKnown RBP12.31□□□□□ -0.44
LINC00461-208ENST00000508885 CFAP70Q5T0N1 1121 aa12.31□□□□□ -0.44
LINC00461-208ENST00000508885 C14orf93Q9H972 538 aaKnown RBP12.31□□□□□ -0.44
LINC00461-208ENST00000508885 SIRT1Q96EB6 747 aa12.3□□□□□ -0.44
LINC00461-208ENST00000508885 DHX57Q6P158 1386 aaKnown RBP12.3□□□□□ -0.44
LINC00461-208ENST00000508885 PIK3C2GO75747 1445 aa12.29□□□□□ -0.44
LINC00461-208ENST00000508885 PRAM1Q96QH2 718 aa12.29□□□□□ -0.44
LINC00461-208ENST00000508885 POGKQ9P215 609 aa12.29□□□□□ -0.44
LINC00461-208ENST00000508885 SF3B2Q13435 895 aaKnown RBP12.28□□□□□ -0.44
LINC00461-208ENST00000508885 SEPT12Q8IYM1 358 aa12.28□□□□□ -0.44
LINC00461-208ENST00000508885 PMFBP1Q8TBY8 1022 aa12.28□□□□□ -0.44
LINC00461-208ENST00000508885 RALGAPBQ86X10 1494 aa12.27□□□□□ -0.44
LINC00461-208ENST00000508885 A0A0G2JS52 829 aa12.27□□□□□ -0.45
LINC00461-208ENST00000508885 MYT1Q01538 1121 aa12.27□□□□□ -0.45
LINC00461-208ENST00000508885 DEFB132Q7Z7B7 95 aa12.27□□□□□ -0.45
LINC00461-208ENST00000508885 SLIT2O94813 1529 aa12.27□□□□□ -0.45
LINC00461-208ENST00000508885 VPS72Q15906 364 aa12.26□□□□□ -0.45
LINC00461-208ENST00000508885 FAM83GA6ND36 823 aa12.25□□□□□ -0.45
LINC00461-208ENST00000508885 HIRIP3Q9BW71 556 aaPredicted RBP12.25□□□□□ -0.45
LINC00461-208ENST00000508885 TRAK1Q9UPV9 953 aa12.25□□□□□ -0.45
LINC00461-208ENST00000508885 KDM2AQ9Y2K7 1162 aa12.25□□□□□ -0.45
LINC00461-208ENST00000508885 BLMP54132 1417 aaPredicted RBP12.25□□□□□ -0.45
LINC00461-208ENST00000508885 TNS3Q68CZ2 1445 aa12.25□□□□□ -0.45
LINC00461-208ENST00000508885 SBNO1A3KN83 1393 aa12.24□□□□□ -0.45
LINC00461-208ENST00000508885 ARHGEF10O15013 1369 aa12.24□□□□□ -0.45
LINC00461-208ENST00000508885 KRT27Q7Z3Y8 459 aa12.24□□□□□ -0.45
LINC00461-208ENST00000508885 FMN2Q9NZ56 1722 aa12.24□□□□□ -0.45
LINC00461-208ENST00000508885 MARF1Q9Y4F3 1742 aaKnown RBP12.24□□□□□ -0.45
LINC00461-208ENST00000508885 KNDC1Q76NI1 1749 aa12.23□□□□□ -0.45
LINC00461-208ENST00000508885 KIF1AQ12756 1690 aa12.23□□□□□ -0.45
LINC00461-208ENST00000508885 GLI3P10071 1580 aa12.23□□□□□ -0.45
LINC00461-208ENST00000508885 MINK1Q8N4C8 1332 aaPredicted RBP12.23□□□□□ -0.45
LINC00461-208ENST00000508885 ACIN1Q9UKV3 1341 aaKnown RBP12.23□□□□□ -0.45
LINC00461-208ENST00000508885 IFT172Q9UG01 1749 aa12.23□□□□□ -0.45
LINC00461-208ENST00000508885 FAM98CQ17RN3 349 aaKnown RBP12.22□□□□□ -0.45
LINC00461-208ENST00000508885 USP32Q8NFA0 1604 aa12.22□□□□□ -0.45
LINC00461-208ENST00000508885 NRXN1Q9ULB1 1477 aa12.21□□□□□ -0.45
LINC00461-208ENST00000508885 ONECUT3O60422 494 aaPredicted RBP12.21□□□□□ -0.45
LINC00461-208ENST00000508885 PAK3O75914 559 aaPredicted RBP12.21□□□□□ -0.45
LINC00461-208ENST00000508885 BTG4Q9NY30 223 aa12.21□□□□□ -0.45
LINC00461-208ENST00000508885 RGPD8O14715 1765 aaPredicted RBP12.2□□□□□ -0.46
LINC00461-208ENST00000508885 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.2□□□□□ -0.46
LINC00461-208ENST00000508885 GPRASP1Q5JY77 1395 aa12.2□□□□□ -0.46
LINC00461-208ENST00000508885 NGDNQ8NEJ9 315 aaKnown RBP12.2□□□□□ -0.46
LINC00461-208ENST00000508885 DCAF11Q8TEB1 546 aa12.2□□□□□ -0.46
LINC00461-208ENST00000508885 BAG6P46379 1132 aa12.19□□□□□ -0.46
LINC00461-208ENST00000508885 ANKARQ7Z5J8 1434 aa12.19□□□□□ -0.46
LINC00461-208ENST00000508885 WASLO00401 505 aaPredicted RBP12.18□□□□□ -0.46
LINC00461-208ENST00000508885 RAB3GAP2Q9H2M9 1393 aa12.18□□□□□ -0.46
LINC00461-208ENST00000508885 PRR36Q9H6K5 1346 aa12.17□□□□□ -0.46
LINC00461-208ENST00000508885 BRWD3Q6RI45 1802 aa12.17□□□□□ -0.46
LINC00461-208ENST00000508885 PSDA5PKW4 1024 aaPredicted RBP12.17□□□□□ -0.46
LINC00461-208ENST00000508885 FAM182BQ5T319 152 aa12.17□□□□□ -0.46
LINC00461-208ENST00000508885 SRCAPQ6ZRS2 3230 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms